Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0955 ATGGCAGCGCCAAAGCCTCGCGCCACTCGGTCCAGGTCTCACAGGGATGTTCCGGATTTGGAGAAGATGGACGGTGCTTACAGTTGGGACGCCCTCGAATGGACCAAGATTGAGCCCGTTCCTCGGTCGGTTTCGCGTGTCAACTTGAATTGCTTGCTCGAAGCCGAACAAGTGATTGCTGAGGGCTATGGTGTCGTTCTTGTGAATACGGATGAGGCGGGTACCTTGTTTGTAACCAATTTTCGTCTTCTATTTCTAAGTGAAGGAACCATGGATGTTATTGCTCTTGGCACTATACCACTGGCGACAATTGAAAAATTCAACAAATTAGTTGTGAAGACAAATTCTGCCTCTCGCCAGTCTGAAAAGTCTTCATCTAGACGACTTCTTCAGGTCATTGCAAATGACATGAGAATTATTGTCTTTGGTTTTCGTCCAAGAACAAAACAGAGGCGTAAAGTATATGATGCATTATTGAAGTGTATGAAACCTGCAAGAATATGGGATCTATATGCATTCAAGTCCGGGCCATCCAAGTACAGTAATACAGACCCAAAAGTTCGCTTGCTAAATGAGTATTTTCGGCTTCTTGGAAAGGGTTCCCTACGTGCATCGATGAGTATGATTGAAGATGGATCATTTACATTGTCGAATGAATTATGGAGAATAACTAACGTCAATTCCAGTTATACTTTGTGTCAGAGTTATCCATTTGCATTAGTTGTTCCAAAACACATTAGTGATGAAGAAATGTTGCAGGCTTCTACCTTTCGTGCTAGATGTCGTTTGCCAGTTGTTTCGTGGTGCAATCCTGGTACTGGAGCTGTTCTTGCACGTTCATCTCAACCTTTAGTTGGTCTTATGATGAATATGAGAAGTAATACTGACGAAAAGCTTGTTGCTGCGCTATGCTCACATCTTGCTGGAGTTCAAGGGTCATCACGTAGGAAGCTTTATATAGCTGACGCAAGGCCTAGAAAAAATGCTTTAGCAAATGGAGCTATGGGAGGTGGCTCAGAATCTTCATCAAATTATTTTCAATCTGAGATAGTTTTTTTTGGGATTGACAACATACATGCAATGCGGGAAAGTCTTACTCGACTCAAAGAGTACTTGGATACTCATGGTGCAAGATCATCTGACGGAATGTCATCATTCTTGAGACATGGCGGATGGACTTGGGGTGGAGGTAATCTTAGTAGCATGTCTGCATCTGTATCAACTTTGGGAGATAGTGGCTGGTTAATCCATGTTCAAAGCGTCTTGGCTGGCTCAGCGTGGATTGCTGCACGTGCTGCTTTGGAAAAAGCAACGGTGCTAGTTCATTGCAGTGATGGGTGGGACAGAACAACGCAACTAGTTTCACTTGCTAGCTTACTACTTGATCCTTATTATAGGACGTTCACTGGATTTCAGGCATTGGTTGAAAAGGATTGGCTGGCATTTGGTCATCCTTTCTCAGATCGATCTGGCACGCCAACTATATCAGGAAGTGGTAACATGCCGTATGAACTCACTAGGCAGTCTTCAACTGGAAGTTTATCTTCTTCACCTGTGCGTCAGCCATCAGGATCCTTCACGCCTCAAGCTTCCAGTCCTTCTCATGCACAAACCTCGAACAACTGTTCTCCCATATTTTTACAGTGGGTTGATTGCGTTTCACAACTTCTGCGGATGTATCCCTTTGCTTTTGAGTTCTCTTCTGCATTCCTGGTGGATCTCTTGGACTCTATGCTTTCCTGTCGCTTTGGGAACTTCTTATGCAATTGTGAGAAGGAGCGGCAGCAGTGTGCAGTTTCTGAAGTTTGCGGCTGTCTATGGGTGTATTTAGCTGATTTACGAGTTTCGGAAGGAAGTTCACATGTGCATTATAACCTCTTCTATGATCCAACCAAACATGAAGGTCCTCTCTTACCTCCTGCAGCAGCTCTAGCTCCAACTCTCTGGCCACAGTTCCATCTTCGTTGGGCTTGTCCTAAAGAATCCCAAGCTGGGGAACTTGAAGCGAGATGCAGGAAAATGGCTATAAAATTCTCTGAAATGCAGAAGGACAAAGAAATGGCCGAGAGAAAAGCCCAAGAGACGACGGCTGCCATGGAATCATTAAAAGCAGAGTTGCAAAACGAGAAACAGTCAAGTATATCTGCTATAAGTGCAGCAAAAAGTGCAAGCAAAGAATGTGAAGCCATAAAGAAAGCAATTCAATCTCTAGGTTGCAAGGTACAAGTCTCTAGTAATGGTTATTGTACTGTTGACATTGAGGGCGACCTGATGAAATCCAATCAGAAAAGTCGTCCTGCTTCAAGAAGGGCTTCACATCGTACACTGCCCGTTAAAGAAGAGGATGACATCCCCCTTTCTACCACAGTTACAGCAGATGATGTGCCAAGCAACCCTCTCAGTCATGTTTGTGAAGCTCTTTGCCCGTTGCGCACTCGGGATGGAGGGTGTCGGTGGCCTGATGCTGGTTGTGCTCATTTGGGTAGCCAGTTTATTGGACTAAAGGCAAATTACGATGCATTCGATCAACTATCCATATACGATGGTTATTTCAAGCCAGAATGA 2565 44.37 MAAPKPRATRSRSHRDVPDLEKMDGAYSWDALEWTKIEPVPRSVSRVNLNCLLEAEQVIAEGYGVVLVNTDEAGTLFVTNFRLLFLSEGTMDVIALGTIPLATIEKFNKLVVKTNSASRQSEKSSSRRLLQVIANDMRIIVFGFRPRTKQRRKVYDALLKCMKPARIWDLYAFKSGPSKYSNTDPKVRLLNEYFRLLGKGSLRASMSMIEDGSFTLSNELWRITNVNSSYTLCQSYPFALVVPKHISDEEMLQASTFRARCRLPVVSWCNPGTGAVLARSSQPLVGLMMNMRSNTDEKLVAALCSHLAGVQGSSRRKLYIADARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHAMRESLTRLKEYLDTHGARSSDGMSSFLRHGGWTWGGGNLSSMSASVSTLGDSGWLIHVQSVLAGSAWIAARAALEKATVLVHCSDGWDRTTQLVSLASLLLDPYYRTFTGFQALVEKDWLAFGHPFSDRSGTPTISGSGNMPYELTRQSSTGSLSSSPVRQPSGSFTPQASSPSHAQTSNNCSPIFLQWVDCVSQLLRMYPFAFEFSSAFLVDLLDSMLSCRFGNFLCNCEKERQQCAVSEVCGCLWVYLADLRVSEGSSHVHYNLFYDPTKHEGPLLPPAAALAPTLWPQFHLRWACPKESQAGELEARCRKMAIKFSEMQKDKEMAERKAQETTAAMESLKAELQNEKQSSISAISAAKSASKECEAIKKAIQSLGCKVQVSSNGYCTVDIEGDLMKSNQKSRPASRRASHRTLPVKEEDDIPLSTTVTADDVPSNPLSHVCEALCPLRTRDGGCRWPDAGCAHLGSQFIGLKANYDAFDQLSIYDGYFKPE 854
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7699206 7711285 - Tan0017825.1 Tan11g0955 767892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0955 854 Pfam Myotubularin-like phosphatase domain 215 595 IPR010569 -
Tan11g0955 854 PANTHER MYOTUBULARIN-RELATED 49 790 IPR030564 GO:0004438(PANTHER)|GO:0106018(PANTHER)
Tan11g0955 854 MobiDBLite consensus disorder prediction 507 538 - -
Tan11g0955 854 Gene3D - 63 162 IPR011993 -
Tan11g0955 854 Coils Coil 678 712 - -
Tan11g0955 854 CDD PTP-MTM-like 261 555 - -
Tan11g0955 854 ProSitePatterns Tyrosine specific protein phosphatases active site. 441 451 IPR016130 GO:0016311(InterPro)
Tan11g0955 854 ProSiteProfiles Myotubularin phosphatase domain. 198 653 IPR010569 -
Tan11g0955 854 SUPERFAMILY PH domain-like 51 174 - -
Tan11g0955 854 SMART gram2001c 43 111 IPR004182 -
Tan11g0955 854 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 215 657 IPR029021 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0955 K18081 - csv:101204839 1547.72