Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1030 ATGGCGTCAGAGCGGCCGCTCTTGATTGTATCTCCAAGAACACCCAAAACTATCTCTCACGATCTACAGAAACCGGAGCCAAACCGACCTGGATTGTTCTCCGCCATGGATTCACGAAGCCCTAATGAGTACTCGGCGAGTACCGAACTGGGTCACCGCTCTTTCTCGCGGCGAAGTCAATCGTCGCTACAATCGAAGTCCTCAATTCGTGAAGTGGGTTCCAGTGATTTTGGATCGAGGCCTGTTCGTCATGGCTCTCGAGGTGCTGATTCTGAAGCATTGAGCATATCCCAGAAGGAGATCAGTGACGAAGATGCGAGGTTGATTTACATCGACGATCCTGAAAAGACGAACGAGAAGTTTGAATTCGCTAGAAATTCGATTCGTACGGGCAAGTATTCGATTCTGACTTTTCTACCCAGGAATCTGTTCGAACAGTTTCATAGAATTGCTTATATATATTTCCTTGTTATTGCGGTTCTTAATCAACTTCCCCAGCTTGCCGTTTTTGGTCGGACAGTCTCCATTTTGCCTTTAGCTTTTGTGCTTCTAGTTACTGCAGTTAAAGATGCATATGAGGATTGGAGAAGGCATCGTTCTGATAAAATTGAGAACAATAGATTAGCTTCAGTTTTGGTAAATGGTCAGTTTCAAGATAAGAAATGGAAGGATATTAGAGTTGGTGAGATAATTAAGATTGGTGCAAATGGCACCATTCCTTGTGATATGGTGCTTCTCTCTACCAGTGATTCCACAGGGGTTGCCTATGTGCAGACTCTGAATTTGGATGGGGAATCGAATTTGAAAACGAGGTACGCGAAGCAAGAGACGATGTCGAAAATGCCCGACAAGGAGAAGATTGTTGGGTTGATTAAATGTGAGAAACCAAACAGGAATATCTATGGATTTCATGCTAATATGGAGATTGATGGGAAACGTCTTTCTCTTGGACCTCCTAACATTGTTCTTCGTGGCTGTGAGCTCAAGAATACTAGCTGGGCTGTTGGTGTTGCTGTATATGCTGGCCGTGAGACCAAAGCCATGCTTAACAGTTCTGGAGCTCCGTCGAAAAGAAGCCGACTCGAGACTCGCATGAATGTGGAGATTATTATACTCTCCTTCTTTCTCATTGCTTTGTGTACAGTTGTTTGTGTTTTGGCTGCTGTTTGGTTCTTCAGAAACAGGGAAGATTTGGACATTTTACCTTATTTCAGAAATAAGGATTTCTCAAAAGATCCACCTGAAACCTATAACTACTATGGATGGGGATTGGAGGCGTTTTTTGTATTCCTCATGTCAGTCATTGTGTTTCAGATCATGATCCCCATTTCACTTTACATTTCGATGGAGCTGGTTCGGGTTGGCCAAGCTTATTTCATGATCCGAGATGCCCAAATGTATGATGAGACATCAAATTCTAGATTTCAGTGCCGGGCTTTGAACATAAACGAGGATTTAGGACAAATAAAGTATGTGTTTTCAGACAAAACGGGCACTCTTACTGAGAATAAGATGGAGTTTCGATGTGCTAGCATCTGGGGGGTCGATTATGGAGGTGAAAGTAACAACCCCATCGACGAGCAGATTGGATACTCTGTTCGTGTGAATGGTAAAGTTTTGAGACCGAAATTGGTTGTCAAAACCGACCCTCAGCTTCTACAGTTACTGAAAAGTGGAAAACACACCAGAGATGGAAGATACATTCATGACTTCTTCCTCGCATTAGCTGCTTGCAATACCATCGTTCCTCTCATTACCGAAAGTTCTGATCCTTCAGTGCAATTAATTGACTACCAAGGGGAGTCTCCAGATGAACAGGCATTGGTTTATGCTGCTGCAGCATATGGTTTTATGCTAATCGAACGAACTTCTGGCCATATAGTTATTGACATACATGGTGAAAAACAAAGGTATAATGTTTTGGGAATGCACGAGTTTGATAGCGACAGGAAGCGTATGTCGGTTATATTGGGGTGTCCTGATATGACCTTTAAAGTATTTGTAAAAGGTGCTGACAACTCCATGTTCAAGGTGATGGGTGAAAATCTGAACATGGGTATCATTCAAGCGACAAAAGCTCATCTTCATTCATACTCATCAAAGGGTCTCAGAACACTGGTTATTGGGATGAAAGAACTCAGTTCTTCTGACTTTGATAAATGGCACTTGATGTTTGAGGAAGCAAGCACCGCGCTGATCGGTAGGGTTGCGAAGCTTCGCAAGGTTGCCAGTAGCATAGAAAACAATTTATCCATATTGGGTGCCTCGGGCATTGAAGATAAGTTACAGAAAGGTGTGCCAGAAGCCATAGAAGCTTTAAGAATGGCAGGAATTAAAGTATGGGTTTTGACTGGGGACAAGCAAGAAACTGCTATATCAATAGGTTACTCCTCAAAGCTCTTGACAAACAAGATGACCCAAATTATAATTAACAGCAACTCAGTGGATTCGTGTCAAAGGAGTTTAGAAGATGCAATAATCATGTCGAAGAAGCTTGCTACTGCCTCAGGGGTTACACTGGATAGTGAAGGACGCACCGAAGTTATAACGACTTCGGTTGCATTGATCATTGATGGTAGCAGCCTCGTTCATATTCTCGACAGTAGACTTGAAGAACAGGTAAATGCTTTCAAACCTGCAAACTCTATCTCGTATATACTCTTGAATGTCTAA 2673 42.65 MASERPLLIVSPRTPKTISHDLQKPEPNRPGLFSAMDSRSPNEYSASTELGHRSFSRRSQSSLQSKSSIREVGSSDFGSRPVRHGSRGADSEALSISQKEISDEDARLIYIDDPEKTNEKFEFARNSIRTGKYSILTFLPRNLFEQFHRIAYIYFLVIAVLNQLPQLAVFGRTVSILPLAFVLLVTAVKDAYEDWRRHRSDKIENNRLASVLVNGQFQDKKWKDIRVGEIIKIGANGTIPCDMVLLSTSDSTGVAYVQTLNLDGESNLKTRYAKQETMSKMPDKEKIVGLIKCEKPNRNIYGFHANMEIDGKRLSLGPPNIVLRGCELKNTSWAVGVAVYAGRETKAMLNSSGAPSKRSRLETRMNVEIIILSFFLIALCTVVCVLAAVWFFRNREDLDILPYFRNKDFSKDPPETYNYYGWGLEAFFVFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDAQMYDETSNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGVDYGGESNNPIDEQIGYSVRVNGKVLRPKLVVKTDPQLLQLLKSGKHTRDGRYIHDFFLALAACNTIVPLITESSDPSVQLIDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGEKQRYNVLGMHEFDSDRKRMSVILGCPDMTFKVFVKGADNSMFKVMGENLNMGIIQATKAHLHSYSSKGLRTLVIGMKELSSSDFDKWHLMFEEASTALIGRVAKLRKVASSIENNLSILGASGIEDKLQKGVPEAIEALRMAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSVDSCQRSLEDAIIMSKKLATASGVTLDSEGRTEVITTSVALIIDGSSLVHILDSRLEEQVNAFKPANSISYILLNV 890
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8153804 8159264 - Tan0009589.3 Tan11g1030 767967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1030 890 Gene3D - 758 841 IPR023214 -
Tan11g1030 890 Pfam E1-E2 ATPase 209 449 - -
Tan11g1030 890 SUPERFAMILY HAD-like 480 802 IPR036412 -
Tan11g1030 890 Gene3D - 178 350 - -
Tan11g1030 890 MobiDBLite consensus disorder prediction 38 74 - -
Tan11g1030 890 Pfam Phospholipid-translocating ATPase N-terminal 109 176 IPR032631 -
Tan11g1030 890 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 499 766 IPR023299 GO:0000166(InterPro)
Tan11g1030 890 SUPERFAMILY Calcium ATPase, transduction domain A 206 347 IPR008250 -
Tan11g1030 890 Gene3D - 515 757 IPR023299 GO:0000166(InterPro)
Tan11g1030 890 Pfam Cation transport ATPase (P-type) 601 677 - -
Tan11g1030 890 NCBIfam HAD-IC family P-type ATPase 425 514 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan11g1030 890 FunFam Phospholipid-transporting ATPase 181 350 - -
Tan11g1030 890 SUPERFAMILY Calcium ATPase, transmembrane domain M 122 570 IPR023298 -
Tan11g1030 890 MobiDBLite consensus disorder prediction 1 96 - -
Tan11g1030 890 FunFam Phospholipid-transporting ATPase 597 730 - -
Tan11g1030 890 PRINTS P-type cation-transporting ATPase superfamily signature 776 786 - -
Tan11g1030 890 PRINTS P-type cation-transporting ATPase superfamily signature 493 507 - -
Tan11g1030 890 ProSitePatterns E1-E2 ATPases phosphorylation site. 495 501 IPR018303 -
Tan11g1030 890 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 97 872 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Tan11g1030 890 NCBIfam phospholipid-translocating P-type ATPase 123 873 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g1030 Tan-Chr11:8153804 Tan11g1032 Tan-Chr11:8181039 0.00E+00 dispersed
Tan11g1029 Tan-Chr11:8153804 Tan11g1030 Tan-Chr11:8153804 0.00E+00 tandem
Tan11g1030 Tan-Chr11:8153804 Tan11g1031 Tan-Chr11:8153804 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1030 K14802 - csv:101212953 1580.46