Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1031 ATGGCGTCAGAGCGGCCGCTCTTGATTGTATCTCCAAGAACACCCAAAACTATCTCTCACGATCTACAGAAACCGGAGCCAAACCGACCTGGATTGTTCTCCGCCATGGATTCACGAAGCCCTAATGAGTACTCGGCGAGTACCGAACTGGGTCACCGCTCTTTCTCGCGGCGAAGTCAATCGTCGCTACAATCGAAGTCCTCAATTCGTGAAGTGGGTTCCAGTGATTTTGGATCGAGGCCTGTTCGTCATGGCTCTCGAGGTGCTGATTCTGAAGCATTGAGCATATCCCAGAAGGAGATCAGTGACGAAGATGCGAGGTTGATTTACATCGACGATCCTGAAAAGACGAACGAGAAGTTTGAATTCGCTAGAAATTCGATTCGTACGGGCAAGTATTCGATTCTGACTTTTCTACCCAGGAATCTGTTCGAACAGTTTCATAGAATTGCTTATATATATTTCCTTGTTATTGCGGTTCTTAATCAACTTCCCCAGCTTGCCGTTTTTGGTCGGACAGTCTCCATTTTGCCTTTAGCTTTTGTGCTTCTAGTTACTGCAGTTAAAGATGCATATGAGGATTGGAGAAGGCATCGTTCTGATAAAATTGAGAACAATAGATTAGCTTCAGTTTTGGTAAATGGTCAGTTTCAAGATAAGAAATGGAAGGATATTAGAGTTGGTGAGATAATTAAGATTGGTGCAAATGGCACCATTCCTTGTGATATGGTGCTTCTCTCTACCAGTGATTCCACAGGGGTTGCCTATGTGCAGACTCTGAATTTGGATGGGGAATCGAATTTGAAAACGAGGTACGCGAAGCAAGAGACGATGTCGAAAATGCCCGACAAGGAGAAGATTGTTGGGTTGATTAAATGTGAGAAACCAAACAGGAATATCTATGGATTTCATGCTAATATGGAGATTGATGGGAAACGTCTTTCTCTTGGACCTCCTAACATTGTTCTTCGTGGCTGTGAGCTCAAGAATACTAGCTGGGCTGTTGGTGTTGCTGTATATGCTGGCCGTGAGACCAAAGCCATGCTTAACAGTTCTGGAGCTCCGTCGAAAAGAAGCCGACTCGAGACTCGCATGAATGTGGAGATTATTATACTCTCCTTCTTTCTCATTGCTTTGTGTACAGTTGTTTGTGTTTTGGCTGCTGTTTGGTTCTTCAGAAACAGGGAAGATTTGGACATTTTACCTTATTTCAGAAATAAGGATTTCTCAAAAGATCCACCTGAAACCTATAACTACTATGGATGGGGATTGGAGGCGTTTTTTGTATTCCTCATGTCAGTCATTGTGTTTCAGATCATGATCCCCATTTCACTTTACATTTCGATGGAGCTGGTTCGGGTTGGCCAAGCTTATTTCATGATCCGAGATGCCCAAATGTATGATGAGACATCAAATTCTAGATTTCAGTGCCGGGCTTTGAACATAAACGAGGATTTAGGACAAATAAAGTATGTGTTTTCAGACAAAACGGGCACTCTTACTGAGAATAAGATGGAGTTTCGATGTGCTAGCATCTGGGGGGTCGATTATGGAGGTGAAAGTAACAACCCCATCGACGAGCAGATTGGATACTCTGTTCGTGTGAATGGTAAAGTTTTGAGACCGAAATTGGTTGTCAAAACCGACCCTCAGCTTCTACAGTTACTGAAAAGTGGAAAACACACCAGAGATGGAAGATACATTCATGACTTCTTCCTCGCATTAGCTGCTTGCAATACCATCGTTCCTCTCATTACCGAAAGTTCTGATCCTTCAGTGCAATTAATTGACTACCAAGGGGAGTCTCCAGATGAACAGGCATTGGTTTATGCTGCTGCAGCATATGGTTTTATGCTAATCGAACGAACTTCTGGCCATATAGTTATTGACATACATGGTGAAAAACAAAGGTATAATGTTTTGGGAATGCACGAGTTTGATAGCGACAGGAAGCGTATGTCGGTTATATTGGGGTGTCCTGATATGACCTTTAAAGTATTTGTAAAAGGTGCTGACAACTCCATGTTCAAGGTGATGGGTGAAAATCTGAACATGGGTATCATTCAAGCGACAAAAGCTCATCTTCATTCATACTCATCAAAGGGTCTCAGAACACTGGTTATTGGGATGAAAGAACTCAGTTCTTCTGACTTTGATAAATGGCACTTGATGTTTGAGGAAGCAAGCACCGCGCTGATCGGTAGGGTTGCGAAGCTTCGCAAGGTTGCCAGTAGCATAGAAAACAATTTATCCATATTGGGTGCCTCGGGCATTGAAGATAAGTTACAGAAAGGTGTGCCAGAAGCCATAGAAGCTTTAAGAATGGCAGGAATTAAAGTATGGGTTTTGACTGGGGACAAGCAAGAAACTGCTATATCAATAGGTTACTCCTCAAAGCTCTTGACAAACAAGATGACCCAAATTATAATTAACAGCAACTCAGTGGATTCGTGTCAAAGGAGTTTAGAAGATGCAATAATCATGTCGAAGAAGCTTGCTACTGCCTCAGGGGTTACACTGGATAGTGAAGGACGCACCGAAGTTATAACGACTTCGGTTGCATTGATCATTGATGGTAGCAGCCTCGTTCATATTCTCGACAGTAGACTTGAAGAACAGCTTTTCCAACTATCTTGTCACTGTTCGGTGGTGTTATGTTGTCGAGTCGCCCCATTGCAGAAAGCTGGAATTGTTGCTCTTGTCAAGAGAAGGACTTCTGACATGACACTTGCCATTGGTGATGGTAATTCTCAACGTCTTTGCTTTCTCTCCCTCTTTTTAAAACCTATCTTTCCCAACATATATCAAAACTCTTCTTTGCTATGGATGTTTGGTCATAGAATTTGTGCTTGTTAA 2856 42.61 MASERPLLIVSPRTPKTISHDLQKPEPNRPGLFSAMDSRSPNEYSASTELGHRSFSRRSQSSLQSKSSIREVGSSDFGSRPVRHGSRGADSEALSISQKEISDEDARLIYIDDPEKTNEKFEFARNSIRTGKYSILTFLPRNLFEQFHRIAYIYFLVIAVLNQLPQLAVFGRTVSILPLAFVLLVTAVKDAYEDWRRHRSDKIENNRLASVLVNGQFQDKKWKDIRVGEIIKIGANGTIPCDMVLLSTSDSTGVAYVQTLNLDGESNLKTRYAKQETMSKMPDKEKIVGLIKCEKPNRNIYGFHANMEIDGKRLSLGPPNIVLRGCELKNTSWAVGVAVYAGRETKAMLNSSGAPSKRSRLETRMNVEIIILSFFLIALCTVVCVLAAVWFFRNREDLDILPYFRNKDFSKDPPETYNYYGWGLEAFFVFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDAQMYDETSNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGVDYGGESNNPIDEQIGYSVRVNGKVLRPKLVVKTDPQLLQLLKSGKHTRDGRYIHDFFLALAACNTIVPLITESSDPSVQLIDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGEKQRYNVLGMHEFDSDRKRMSVILGCPDMTFKVFVKGADNSMFKVMGENLNMGIIQATKAHLHSYSSKGLRTLVIGMKELSSSDFDKWHLMFEEASTALIGRVAKLRKVASSIENNLSILGASGIEDKLQKGVPEAIEALRMAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSVDSCQRSLEDAIIMSKKLATASGVTLDSEGRTEVITTSVALIIDGSSLVHILDSRLEEQLFQLSCHCSVVLCCRVAPLQKAGIVALVKRRTSDMTLAIGDGNSQRLCFLSLFLKPIFPNIYQNSSLLWMFGHRICAC 951
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8153804 8159264 - Tan0009589.4 Tan11g1031 767968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1031 951 SUPERFAMILY HAD-like 480 915 IPR036412 -
Tan11g1031 951 Gene3D - 596 736 IPR023299 GO:0000166(InterPro)
Tan11g1031 951 NCBIfam phospholipid-translocating P-type ATPase 123 916 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Tan11g1031 951 FunFam Phospholipid-transporting ATPase 181 350 - -
Tan11g1031 951 Pfam Phospholipid-translocating ATPase N-terminal 109 176 IPR032631 -
Tan11g1031 951 FunFam Phospholipid-transporting ATPase 597 730 - -
Tan11g1031 951 Gene3D - 750 917 IPR023214 -
Tan11g1031 951 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 499 766 IPR023299 GO:0000166(InterPro)
Tan11g1031 951 MobiDBLite consensus disorder prediction 38 74 - -
Tan11g1031 951 PRINTS P-type cation-transporting ATPase superfamily signature 776 786 - -
Tan11g1031 951 PRINTS P-type cation-transporting ATPase superfamily signature 899 911 - -
Tan11g1031 951 PRINTS P-type cation-transporting ATPase superfamily signature 493 507 - -
Tan11g1031 951 SUPERFAMILY Calcium ATPase, transmembrane domain M 122 570 IPR023298 -
Tan11g1031 951 MobiDBLite consensus disorder prediction 1 96 - -
Tan11g1031 951 ProSitePatterns E1-E2 ATPases phosphorylation site. 495 501 IPR018303 -
Tan11g1031 951 Gene3D - 184 351 - -
Tan11g1031 951 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 97 915 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Tan11g1031 951 Pfam Cation transport ATPase (P-type) 601 677 - -
Tan11g1031 951 NCBIfam HAD-IC family P-type ATPase 425 514 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan11g1031 951 SUPERFAMILY Calcium ATPase, transduction domain A 206 347 IPR008250 -
Tan11g1031 951 Pfam E1-E2 ATPase 209 449 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g1029 Tan-Chr11:8153804 Tan11g1031 Tan-Chr11:8153804 0.00E+00 dispersed
Tan11g1031 Tan-Chr11:8153804 Tan11g1036 Tan-Chr11:8181039 0.00E+00 dispersed
Tan11g1030 Tan-Chr11:8153804 Tan11g1031 Tan-Chr11:8153804 0.00E+00 tandem
Tan11g1031 Tan-Chr11:8153804 Tan11g1032 Tan-Chr11:8181039 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1031 K14802 - csv:101212953 1659.81