Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1034 ATGGTGCTTCTCTCTACCAGCGATTCAACAGGGGTTGCGTTTGTGCAGACTCTGAATTTGGATGGGGAATTAAATTTGAAAACCAGGTATGCAAAACAGGAAACGATGTCCAAAATGTCCGACAAGGAGAAGATTGTTGGGTTGATTAAATGTGAGAACCCCAGTAGGAATATCTATGGATTTGATGCCAATATGGAGATTGATGGGGAACGTCTTGTTCTTGGACCTTCTAACATAGTTCTTCGTGGATGTGAGCTCAAGAGTACTAGCTGGGCTGTTGGTGTTGCTGTATATGCTGGCCGTGAAACCAAAGCCTCGCTTAACAGTTCTGGAGCTCCATTTAAAAGAAGCCGTCTCGAGACCCGGAAGGGCAAAGAGATTATGATACTCTCTTTGTTTCTTATTGCTTTGTGTGCAGTCGTTTGTGTTTGTGCTGCTGTTTGGTTCATCAGAAATGGGGAAGATTTGGACATTTTACCTTATTTCAGAAAGAAGGATTTTTCAGTAAACCCTCCTGAAACCTATAATTACCATGGCTGGAGATTGGATGCATTTTTTGTATTCCTCACGTCAGTCATTGTGTTTCAGATTATGATCCCCATTTCCCTTTACATTTCAATGGAGCTTGTTCGCCTCGGCCAGGCTTATTTCATGATCCGAGACACTGGAATGTATGATGAAACATCAAATTCAAGACTCCAGTGTCGGGCTTTGAACATAAATGAAGATTTAGGACAGATAAGGTATGTGTTTTCAGACAAAACAGGTACCCTTACTAAGAATAAGATAAAATTTCAATGTGCAAGCATTCGGGGGATCAATTATGGATGTGGAAGAGCAAATCCCTTGGGCGAGCAGATTGGATACTCTGTTCAAGTGAATGGAAAGGTGTTGAGACCCAAAATGGCAGTCAAAACCAATTCTGAGCTTCTGGGGTTATTAAAAAGTGGAAGGCATACCGAGGAAGGGAAATATATTCACGATTTCTTCCTTGCATTAGCCGCTTGCAATACCATTGTTCCTCTCATTTCTGAAACTTCTGATCCTTCAGTACAATTAATTGACTACCAAGGGGAATCTTCAGATGAACAGGCTTTGGTTTATGCTGCTGCGGCATATGGTTTTATGCTAATTGAACGAACTGCTGGCCATATGGTTATTGACGTGCATGGTGAAAAGCAAAGGTACAATCTTTTCGGACTGCACGAGTTTGATAGTGACAGGAAGCGGATGTCAGTGGTACTGGGGTGTCCTGATATGACCTTCAAAGTACTTGTAAAAGGTGCTGACACCTCCATGTTCAATGTGATGGATGGAGTTCTGAACATGGATATCATTCAAGCGACTGAAGCTCATCTTCGTTCATACTACTCAGAGGGTCTTAGGACAATGGTTATTGGGATGAAAGAGCTCAGTCCTTCCGACTTCGAGAAATGGCACTTGATGCTTGTGGAAGCAAACAATGCTTTGATCAATAGGGCTTCTCAACTTCGCAAGGTTGCCAGGAACATAGAAAACAATCTATGCATATTGGGTGCCTTGGGCACGGAAGATAAGTTGCAAAAAGGTGTGCCAAAAGCCATAGAATCTTTAAGAACCGCTGGAATTAAAGTATGGGTTTTGACAGGGGACAAGCAAGAAACTGCTATATCGATTGGTTACTCCTCAAGGCTGTTAACAAAGGAGATGCCTCAAATTATAATTAACAGCAACTCGGAGGAATCATGCCGAAGAATTTTAGAAAATGCAATAATCATGTCGAAAAAGTTCGCTAGTGTGCCAGGGGTTACGCTGGACAGTGGAAGAAGCACTGAAATTGTAACAACTTCAGTTGCATTGATCATTGATGGTGCCAGCCTCATTTATATACTTGAACGTGAACTTGAAGAACAGCTTCTCGAACTAGCTTGTTTCTGTTCAGTTGTGTTATGTTGTCGGGTTGCCCCATTGCAGAAAGCTGGAATTGTTGCTCTTGTCAAGGAAAGGACTTCTGACATGACACTTGCCATTGGTGATGGCGCGAATGACGTGTCAATGATCCATATGGCGGATGTGGGCATAGGTATCAATGGTATAGAAGGTCGACAAGCGGCCGTAGCATCACATTTTGCCCTTGGGCAGTTTAGATTTTTGGTTCCTCTTCTATTGGTCCATGGACATTGGAATTACCAGAGGATGGGCTACATGATTCTGTACACTTTTTACAGAAATGCAGTGTTTGTGCTTGTTTTATTTTGGTATGTGCTCTATACTGGTTTCTCGTTGACAACGGCGATCAACCAATGGAGCAGTGTGCTCTACTCTATAATCTATACTTGTTTGCCTACAATTGTTGTTGGAATTCTTGACAAGGACTTGGGTAGAAGGACTCTTCTTAGATACCCTGAGCTCTATAGGGCTGGACATAGACAGGAGGGTTACAACTCTAGATTGTTCTGGTTAACGATGATTGACACTGTGTGGCAAAGCATTACTATTTTCTTCATCCCCCTCCTTGCATACTGGGCTACCACCATTGACGTTTCGAGCCTCGGTGATCTCTGGCTGCTTGCCTTGGTCATCGTTGTCAACTTGCACTTGGCGATGGACATCTTCCGATGGAACATCATCACCCATGCTGTGATTTGGGGATCCATTCTCATAACTATCATTTGTGTCATTGTGCTTGATTCGTTTGTCTCGCTGCCTGGTTATTGGGCAATATATCACGTGGCGGGCACGGTGCCTTTTTGGCTATGTTTGTTAGCAATTGTCGTAGTAGCATTACTTCCTCGTTTTGTCGTAAAATACCTTTACCAGTATTGCAGTCCATGTGACATCCAGGTAGCAAGAGAGGCTGATAAATTTGGGAGGACAAGAGAGTTGGGAGATGTACAAACAGAGATGACCCCCGTCCTCAACAACCCTTCACAATAG 2916 43.04 MVLLSTSDSTGVAFVQTLNLDGELNLKTRYAKQETMSKMSDKEKIVGLIKCENPSRNIYGFDANMEIDGERLVLGPSNIVLRGCELKSTSWAVGVAVYAGRETKASLNSSGAPFKRSRLETRKGKEIMILSLFLIALCAVVCVCAAVWFIRNGEDLDILPYFRKKDFSVNPPETYNYHGWRLDAFFVFLTSVIVFQIMIPISLYISMELVRLGQAYFMIRDTGMYDETSNSRLQCRALNINEDLGQIRYVFSDKTGTLTKNKIKFQCASIRGINYGCGRANPLGEQIGYSVQVNGKVLRPKMAVKTNSELLGLLKSGRHTEEGKYIHDFFLALAACNTIVPLISETSDPSVQLIDYQGESSDEQALVYAAAAYGFMLIERTAGHMVIDVHGEKQRYNLFGLHEFDSDRKRMSVVLGCPDMTFKVLVKGADTSMFNVMDGVLNMDIIQATEAHLRSYYSEGLRTMVIGMKELSPSDFEKWHLMLVEANNALINRASQLRKVARNIENNLCILGALGTEDKLQKGVPKAIESLRTAGIKVWVLTGDKQETAISIGYSSRLLTKEMPQIIINSNSEESCRRILENAIIMSKKFASVPGVTLDSGRSTEIVTTSVALIIDGASLIYILERELEEQLLELACFCSVVLCCRVAPLQKAGIVALVKERTSDMTLAIGDGANDVSMIHMADVGIGINGIEGRQAAVASHFALGQFRFLVPLLLVHGHWNYQRMGYMILYTFYRNAVFVLVLFWYVLYTGFSLTTAINQWSSVLYSIIYTCLPTIVVGILDKDLGRRTLLRYPELYRAGHRQEGYNSRLFWLTMIDTVWQSITIFFIPLLAYWATTIDVSSLGDLWLLALVIVVNLHLAMDIFRWNIITHAVIWGSILITIICVIVLDSFVSLPGYWAIYHVAGTVPFWLCLLAIVVVALLPRFVVKYLYQYCSPCDIQVAREADKFGRTRELGDVQTEMTPVLNNPSQ 971
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8181039 8188219 - Tan0008852.3 Tan11g1034 767971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1034 971 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 933 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Tan11g1034 971 SFLD p-type atpase 234 721 IPR044492 -
Tan11g1034 971 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 309 524 IPR023299 GO:0000166(InterPro)
Tan11g1034 971 SUPERFAMILY Calcium ATPase, transmembrane domain M 110 935 IPR023298 -
Tan11g1034 971 Gene3D - 507 710 IPR023214 -
Tan11g1034 971 FunFam Phospholipid-transporting ATPase 511 710 - -
Tan11g1034 971 Pfam Cation transport ATPase (P-type) 359 434 - -
Tan11g1034 971 Gene3D - 353 485 IPR023299 GO:0000166(InterPro)
Tan11g1034 971 PRINTS P-type cation-transporting ATPase superfamily signature 670 689 - -
Tan11g1034 971 PRINTS P-type cation-transporting ATPase superfamily signature 251 265 - -
Tan11g1034 971 SUPERFAMILY HAD-like 246 716 IPR036412 -
Tan11g1034 971 SFLD Haloacid Dehalogenase 234 721 - -
Tan11g1034 971 NCBIfam phospholipid-translocating P-type ATPase 1 945 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Tan11g1034 971 Coils Coil 487 507 - -
Tan11g1034 971 ProSitePatterns E1-E2 ATPases phosphorylation site. 253 259 IPR018303 -
Tan11g1034 971 Pfam Phospholipid-translocating P-type ATPase C-terminal 699 937 IPR032630 -
Tan11g1034 971 NCBIfam HAD-IC family P-type ATPase 640 754 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g1034 Tan-Chr11:8181039 Tan11g1036 Tan-Chr11:8181039 0.00E+00 dispersed
Tan11g1033 Tan-Chr11:8181039 Tan11g1034 Tan-Chr11:8181039 0.00E+00 tandem
Tan11g1034 Tan-Chr11:8181039 Tan11g1035 Tan-Chr11:8181039 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1034 K14802 - csv:101212953 1542.32