Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1038 ATGGTGCTTCTCTCTACCAGCGATTCAACAGGGGTTGCGTTTGTGCAGACTCTGAATTTGGATGGGGAATTAAATTTGAAAACCAGGTATGCAAAACAGGAAACGATGTCCAAAATGTCCGACAAGGAGAAGATTGTTGGGTTGATTAAATGTGAGAACCCCAGTAGGAATATCTATGGATTTGATGCCAATATGGAGATTGATGGGGAACGTCTTGTTCTTGGACCTTCTAACATAGTTCTTCGTGGATGTGAGCTCAAGAGTACTAGCTGGGCTGTTGGTGTTGCTGTATATGCTGGCCGTGAAACCAAAGCCTCGCTTAACAGTTCTGGAGCTCCATTTAAAAGAAGCCGTCTCGAGACCCGGAAGGGCAAAGAGATTATGATACTCTCTTTGTTTCTTATTGCTTTGTGTGCAGTCGTTTGTGTTTGTGCTGCTGTTTGGTTCATCAGAAATGGGGAAGATTTGGACATTTTACCTTATTTCAGAAAGAAGGATTTTTCAGTAAACCCTCCTGAAACCTATAATTACCATGGCTGGAGATTGGATGCATTTTTTGTATTCCTCACGTCAGTCATTGTGTTTCAGATTATGATCCCCATTTCCCTTTACATTTCAATGGAGCTTGTTCGCCTCGGCCAGGCTTATTTCATGATCCGAGACACTGGAATGTATGATGAAACATCAAATTCAAGACTCCAGTGTCGGGCTTTGAACATAAATGAAGATTTAGGACAGATAAGGTATGTGTTTTCAGACAAAACAGGTACCCTTACTAAGAATAAGATAAAATTTCAATGTGCAAGCATTCGGGGGATCAATTATGGATGTGGAAGAGCAAATCCCTTGGGCGAGCAGATTGGATACTCTGTTCAAGTGAATGGAAAGGTGTTGAGACCCAAAATGGCAGTCAAAACCAATTCTGAGCTTCTGGGGTTATTAAAAAGTGGAAGGCATACCGAGGAAGGGAAATATATTCACGATTTCTTCCTTGCATTAGCCGCTTGCAATACCATTGTTCCTCTCATTTCTGAAACTTCTGATCCTTCAGTACAATTAATTGACTACCAAGGGGAATCTTCAGATGAACAGGCTTTGGTTTATGCTGCTGCGGCATATGGTTTTATGCTAATTGAACGAACTGCTGGCCATATGGTTATTGACGTGCATGGTGAAAAGCAAAGGTACAATCTTTTCGGACTGCACGAGTTTGATAGTGACAGGAAGCGGATGTCAGTGGTACTGGGGTGTCCTGATATGACCTTCAAAGTACTTGTAAAAGGTGCTGACACCTCCATGTTCAATGTGATGGATGGAGTTCTGAACATGGATATCATTCAAGCGACTGAAGCTCATCTTCGTTCATACTACTCAGAGGGTCTTAGGACAATGGTTATTGGGATGAAAGAGCTCAGTCCTTCCGACTTCGAGAAATGGCACTTGATGCTTGTGGAAGCAAACAATGCTTTGATCAATAGGGCTTCTCAACTTCGCAAGGTTGCCAGGAACATAGAAAACAATCTATGCATATTGGGTGCCTTGGGCACGGAAGATAAGTTGCAAAAAGGTGTGCCAAAAGCCATAGAATCTTTAAGAACCGCTGGAATTAAAGTATGGGTTTTGACAGGGGACAAGCAAGAAACTGCTATATCGATTGGTTACTCCTCAAGGCTGTTAACAAAGGAGATGCCTCAAATTATAATTAACAGCAACTCGGAGGAATCATGCCGAAGAATTTTAGAAAATGCAATAATCATGTCGAAAAAGTTCGCTAGTGTGCCAGGGGTTACGCTGGACAGTGGAAGAAGCACTGAAATTGTAACAACTTCAGTTGCATTGATCATTGATGGTGCCAGCCTCATTTATATACTTGAACGTGAACTTGAAGAACAGAAAGCTGGAATTGTTGCTCTTGTCAAGGAAAGGACTTCTGACATGACACTTGCCATTGGTGATGGCGCGAATGACGTGTCAATGATCCATATGGCGGATGTGGGCATAGGTATCAATGGTATAGAAGGTCGACAAGCGGCCGTAGCATCACATTTTGCCCTTGGGCAGTTTAGATTTTTGGTTCCTCTTCTATTGGTCCATGGACATTGGAATTACCAGAGGATGGGCTACATGATTCTGTACACTTTTTACAGAAATGCAGTGTTTGTGCTTGTTTTATTTTGGTATGTGCTCTATACTGGTTTCTCGTTGACAACGGCGATCAACCAATGGAGCAGTGTGCTCTACTCTATAATCTATACTTGTTTGCCTACAATTGTTGTTGGAATTCTTGACAAGGACTTGGGTAGAAGGACTCTTCTTAGATACCCTGAGCTCTATAGGGCTGGACATAGACAGGAGGGTTACAACTCTAGATTGTTCTGGTTAACGATGATTGACACTGTGTGGCAAAGCATTACTATTTTCTTCATCCCCCTCCTTGCATACTGGGCTACCACCATTGACGTTTCGAGCCTCGGTGATCTCTGGCTGCTTGCCTTGGTCATCGTTGTCAACTTGCACTTGGCGATGGACATCTTCCGATGGAACATCATCACCCATGCTGTGATTTGGGGATCCATTCTCATAACTATCATTTGTGTCATTGTGCTTGATTCGTTTGTCTCGCTGCCTGGTTATTGGGCAATATATCACGTGGCGGGCACGGTGCCTTTTTGGCTATGTTTGTTAGCAATTGTCGTAGTAGCATTACTTCCTCGTTTTGTCGTAAAATACCTTTACCAGTATTGCAGTCCATGTGACATCCAGGTAGCAAGAGAGGCTGATAAATTTGGGAGGACAAGAGAGTTGGGAGATGTACAAACAGAGATGACCCCCGTCCTCAACAACCCTTCACAAGTAGGACAGAGCAACTATTTGTTCTTTTTTCCCCTTCTTCACATTACGTTTTACTTCACAGTTCTGTATTTTTCCTCTAGGAAGAAAAATCAACATTTGAGAAACCTCACAATATATAAGATATGTGGGTTACTCCTCTTATTGCCAATTGGTTTTGAGATAAAATCCCATATAATCTAA 3033 42.37 MVLLSTSDSTGVAFVQTLNLDGELNLKTRYAKQETMSKMSDKEKIVGLIKCENPSRNIYGFDANMEIDGERLVLGPSNIVLRGCELKSTSWAVGVAVYAGRETKASLNSSGAPFKRSRLETRKGKEIMILSLFLIALCAVVCVCAAVWFIRNGEDLDILPYFRKKDFSVNPPETYNYHGWRLDAFFVFLTSVIVFQIMIPISLYISMELVRLGQAYFMIRDTGMYDETSNSRLQCRALNINEDLGQIRYVFSDKTGTLTKNKIKFQCASIRGINYGCGRANPLGEQIGYSVQVNGKVLRPKMAVKTNSELLGLLKSGRHTEEGKYIHDFFLALAACNTIVPLISETSDPSVQLIDYQGESSDEQALVYAAAAYGFMLIERTAGHMVIDVHGEKQRYNLFGLHEFDSDRKRMSVVLGCPDMTFKVLVKGADTSMFNVMDGVLNMDIIQATEAHLRSYYSEGLRTMVIGMKELSPSDFEKWHLMLVEANNALINRASQLRKVARNIENNLCILGALGTEDKLQKGVPKAIESLRTAGIKVWVLTGDKQETAISIGYSSRLLTKEMPQIIINSNSEESCRRILENAIIMSKKFASVPGVTLDSGRSTEIVTTSVALIIDGASLIYILERELEEQKAGIVALVKERTSDMTLAIGDGANDVSMIHMADVGIGINGIEGRQAAVASHFALGQFRFLVPLLLVHGHWNYQRMGYMILYTFYRNAVFVLVLFWYVLYTGFSLTTAINQWSSVLYSIIYTCLPTIVVGILDKDLGRRTLLRYPELYRAGHRQEGYNSRLFWLTMIDTVWQSITIFFIPLLAYWATTIDVSSLGDLWLLALVIVVNLHLAMDIFRWNIITHAVIWGSILITIICVIVLDSFVSLPGYWAIYHVAGTVPFWLCLLAIVVVALLPRFVVKYLYQYCSPCDIQVAREADKFGRTRELGDVQTEMTPVLNNPSQVGQSNYLFFFPLLHITFYFTVLYFSSRKKNQHLRNLTIYKICGLLLLLPIGFEIKSHII 1010
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8181039 8188219 - Tan0008852.7 Tan11g1038 767975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1038 1010 SUPERFAMILY Calcium ATPase, transmembrane domain M 110 915 IPR023298 -
Tan11g1038 1010 SFLD p-type atpase 234 701 IPR044492 -
Tan11g1038 1010 PRINTS P-type cation-transporting ATPase superfamily signature 251 265 - -
Tan11g1038 1010 PRINTS P-type cation-transporting ATPase superfamily signature 534 544 - -
Tan11g1038 1010 PRINTS P-type cation-transporting ATPase superfamily signature 650 669 - -
Tan11g1038 1010 NCBIfam HAD-IC family P-type ATPase 630 734 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan11g1038 1010 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 917 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Tan11g1038 1010 Gene3D - 507 690 IPR023214 -
Tan11g1038 1010 SFLD Haloacid Dehalogenase 234 701 - -
Tan11g1038 1010 NCBIfam phospholipid-translocating P-type ATPase 1 925 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Tan11g1038 1010 Coils Coil 487 507 - -
Tan11g1038 1010 ProSitePatterns E1-E2 ATPases phosphorylation site. 253 259 IPR018303 -
Tan11g1038 1010 Gene3D - 353 485 IPR023299 GO:0000166(InterPro)
Tan11g1038 1010 Pfam Phospholipid-translocating P-type ATPase C-terminal 679 917 IPR032630 -
Tan11g1038 1010 Pfam Cation transport ATPase (P-type) 359 434 - -
Tan11g1038 1010 SUPERFAMILY HAD-like 238 691 IPR036412 -
Tan11g1038 1010 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 309 524 IPR023299 GO:0000166(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g1038 Tan-Chr11:8181039 Tan11g1042 Tan-Chr11:8209222 0.00E+00 dispersed
Tan11g1037 Tan-Chr11:8181039 Tan11g1038 Tan-Chr11:8181039 0.00E+00 tandem
Tan11g1038 Tan-Chr11:8181039 Tan11g1039 Tan-Chr11:8181039 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1038 K14802 - csv:101212953 1509.58