Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1039 ATGAATTCTACAACCCCAAATGACAACTCGGCGAATACCCAACTCGCTTCCGGCTCTTCCTCGAGTCAATCCAAGTCGTCGATTCCGGAACTGGGTTCTAGTAGTGGTTCTGGATCGAAGCCTGTTCATCAAGAGTCTCGAGGCGCCGCTTCCAATTTCCTTTACGAGACCACCGACCAAGATTTGAGGTTGGTTTACATCAATGATCCTGAAAAGACGCACGACAACTTTGATTTCCCTGGAAATTCGATTCGTACTGGCAAGTATTCGATTATAACTTTTCTGCCCAGGAATCTGTTCGAACAATTTCATAGAATTGCTTATATATATTTTCTTGTTGTTTCGGTTCTTAGTCAACTTCCCCAGCTTGCCGTTTTTGGCCGGGGAGTCTCGATTTTCCCTCTAGCCTTTGTGCTGCTAGTTACAGCAGTTAAAGATGCATATGAGGACTGGAGAAGGCATCGTTCTGATAAAATTGAGAACAATCGGTTGGCTTCAGTTTTGGTGAATGGTGAGTTTCAACCAAAGAAATGGAAGGATATTAGAGTTGGTGAGGTAGTTAAAATTGGCGCTAATGACACCATTCCTTGTGATATGGTGCTTCTCTCTACCAGCGATTCAACAGGGGTTGCGTTTGTGCAGACTCTGAATTTGGATGGGGAATTAAATTTGAAAACCAGGTATGCAAAACAGGAAACGATGTCCAAAATGTCCGACAAGGAGAAGATTGTTGGGTTGATTAAATGTGAGAACCCCAGTAGGAATATCTATGGATTTGATGCCAATATGGAGATTGATGGGGAACGTCTTGTTCTTGGACCTTCTAACATAGTTCTTCGTGGATGTGAGCTCAAGAGTACTAGCTGGGCTGTTGGTGTTGCTGTATATGCTGGCCGTGAAACCAAAGCCTCGCTTAACAGTTCTGGAGCTCCATTTAAAAGAAGCCGTCTCGAGACCCGGAAGGGCAAAGAGATTATGATACTCTCTTTGTTTCTTATTGCTTTGTGTGCAGTCGTTTGTGTTTGTGCTGCTGTTTGGTTCATCAGAAATGGGGAAGATTTGGACATTTTACCTTATTTCAGAAAGAAGGATTTTTCAGTAAACCCTCCTGAAACCTATAATTACCATGGCTGGAGATTGGATGCATTTTTTGTATTCCTCACGTCAGTCATTGTGTTTCAGATTATGATCCCCATTTCCCTTTACATTTCAATGGAGCTTGTTCGCCTCGGCCAGGCTTATTTCATGATCCGAGACACTGGAATGTATGATGAAACATCAAATTCAAGACTCCAGTGTCGGGCTTTGAACATAAATGAAGATTTAGGACAGATAAGGTATGTGTTTTCAGACAAAACAGGTACCCTTACTAAGAATAAGATAAAATTTCAATGTGCAAGCATTCGGGGGATCAATTATGGATGTGGAAGAGCAAATCCCTTGGGCGAGCAGATTGGATACTCTGTTCAAGTGAATGGAAAGGTGTTGAGACCCAAAATGGCAGTCAAAACCAATTCTGAGCTTCTGGGGTTATTAAAAAGTGGAAGGCATACCGAGGAAGGGAAATATATTCACGATTTCTTCCTTGCATTAGCCGCTTGCAATACCATTGTTCCTCTCATTTCTGAAACTTCTGATCCTTCAGTACAATTAATTGACTACCAAGGGGAATCTTCAGATGAACAGGCTTTGGTTTATGCTGCTGCGGCATATGGTTTTATGCTAATTGAACGAACTGCTGGCCATATGGTTATTGACGTGCATGGTGAAAAGCAAAGGTACAATCTTTTCGGACTGCACGAGTTTGATAGTGACAGGAAGCGGATGTCAGTGGTACTGGGGTGTCCTGATATGACCTTCAAAGTACTTGTAAAAGGTGCTGACACCTCCATGTTCAATGTGATGGATGGAGTTCTGAACATGGATATCATTCAAGCGACTGAAGCTCATCTTCGTTCATACTACTCAGAGGGTCTTAGGACAATGGTTATTGGGATGAAAGAGCTCAGTCCTTCCGACTTCGAGAAATGGCACTTGATGCTTGTGGAAGCAAACAATGCTTTGATCAATAGGGCTTCTCAACTTCGCAAGGTTGCCAGGAACATAGAAAACAATCTATGCATATTGGGTGCCTTGGGCACGGAAGATAAGTTGCAAAAAGGTGTGCCAAAAGCCATAGAATCTTTAAGAACCGCTGGAATTAAAGTATGGGTTTTGACAGGGGACAAGCAAGAAACTGCTATATCGATTGGTTACTCCTCAAGGCTGTTAACAAAGGAGATGCCTCAAATTATAATTAACAGCAACTCGGAGGAATCATGCCGAAGAATTTTAGAAAATGCAATAATCATGTCGAAAAAGTTCGCTAGTGTGCCAGGGGTTACGCTGGACAGTGGAAGAAGCACTGAAATTGTAACAACTTCAGTTGCATTGATCATTGATGGTGCCAGCCTCATTTATATACTTGAACGTGAACTTGAAGAACAGAAAGCTGGAATTGTTGCTCTTGTCAAGGAAAGGACTTCTGACATGACACTTGCCATTGGTGATGGCGCGAATGACGTGTCAATGATCCATATGGCGGATGTGGGCATAGGTATCAATGGTATAGAAGGTCGACAAGCGGCCGTAGCATCACATTTTGCCCTTGGGCAGTTTAGATTTTTGGTTCCTCTTCTATTGGTCCATGGACATTGGAATTACCAGAGGATGGGCTACATGATTCTGTACACTTTTTACAGAAATGCAGTGTTTGTGCTTGTTTTATTTTGGTATGTGCTCTATACTGGTTTCTCGTTGACAACGGCGATCAACCAATGGAGCAGTGTGCTCTACTCTATAATCTATACTTGTTTGCCTACAATTGTTGTTGGAATTCTTGACAAGGACTTGGGTAGAAGGACTCTTCTTAGATACCCTGAGCTCTATAGGGCTGGACATAGACAGGAGGGTTACAACTCTAGATTGTTCTGGTTAACGATGATTGACACTGTGTGGCAAAGCATTACTATTTTCTTCATCCCCCTCCTTGCATACTGGGCTACCACCATTGACGTTTCGAGCCTCGGTGATCTCTGGCTGCTTGCCTTGGTCATCGTTGTCAACTTGCACTTGGCGATGGACATCTTCCGATGGAACATCATCACCCATGCTGTGATTTGGGGATCCATTCTCATAACTATCATTTGTGTCATTGTGCTTGATTCGTTTGTCTCGCTGCCTGGTTATTGGGCAATATATCACGTGGCGGGCACGGTGCCTTTTTGGCTATGTTTGTTAGCAATTGTCGTAGTAGCATTACTTCCTCGTTTTGTCGTAAAATACCTTTACCAGTATTGCAGTCCATGTGACATCCAGGTAGCAAGAGAGGCTGATAAATTTGGGAGGACAAGAGAGTTGGGAGATGTACAAACAGAGATGACCCCCGTCCTCAACAACCCTTCACAAGTAGGACAGAGCAACTATTTGTTCTTTTTTCCCCTTCTTCACATTACGTTTTACTTCACAGTTCTGTATTTTTCCTCTAGGAAGAAAAATCAACATTTGAGAAACCTCACAATATATAAGATATGTGGGTTACTCCTCTTATTGCCAATTGGTTTTGAGATAAAATCCCATATAATCTAA 3627 42.57 MNSTTPNDNSANTQLASGSSSSQSKSSIPELGSSSGSGSKPVHQESRGAASNFLYETTDQDLRLVYINDPEKTHDNFDFPGNSIRTGKYSIITFLPRNLFEQFHRIAYIYFLVVSVLSQLPQLAVFGRGVSIFPLAFVLLVTAVKDAYEDWRRHRSDKIENNRLASVLVNGEFQPKKWKDIRVGEVVKIGANDTIPCDMVLLSTSDSTGVAFVQTLNLDGELNLKTRYAKQETMSKMSDKEKIVGLIKCENPSRNIYGFDANMEIDGERLVLGPSNIVLRGCELKSTSWAVGVAVYAGRETKASLNSSGAPFKRSRLETRKGKEIMILSLFLIALCAVVCVCAAVWFIRNGEDLDILPYFRKKDFSVNPPETYNYHGWRLDAFFVFLTSVIVFQIMIPISLYISMELVRLGQAYFMIRDTGMYDETSNSRLQCRALNINEDLGQIRYVFSDKTGTLTKNKIKFQCASIRGINYGCGRANPLGEQIGYSVQVNGKVLRPKMAVKTNSELLGLLKSGRHTEEGKYIHDFFLALAACNTIVPLISETSDPSVQLIDYQGESSDEQALVYAAAAYGFMLIERTAGHMVIDVHGEKQRYNLFGLHEFDSDRKRMSVVLGCPDMTFKVLVKGADTSMFNVMDGVLNMDIIQATEAHLRSYYSEGLRTMVIGMKELSPSDFEKWHLMLVEANNALINRASQLRKVARNIENNLCILGALGTEDKLQKGVPKAIESLRTAGIKVWVLTGDKQETAISIGYSSRLLTKEMPQIIINSNSEESCRRILENAIIMSKKFASVPGVTLDSGRSTEIVTTSVALIIDGASLIYILERELEEQKAGIVALVKERTSDMTLAIGDGANDVSMIHMADVGIGINGIEGRQAAVASHFALGQFRFLVPLLLVHGHWNYQRMGYMILYTFYRNAVFVLVLFWYVLYTGFSLTTAINQWSSVLYSIIYTCLPTIVVGILDKDLGRRTLLRYPELYRAGHRQEGYNSRLFWLTMIDTVWQSITIFFIPLLAYWATTIDVSSLGDLWLLALVIVVNLHLAMDIFRWNIITHAVIWGSILITIICVIVLDSFVSLPGYWAIYHVAGTVPFWLCLLAIVVVALLPRFVVKYLYQYCSPCDIQVAREADKFGRTRELGDVQTEMTPVLNNPSQVGQSNYLFFFPLLHITFYFTVLYFSSRKKNQHLRNLTIYKICGLLLLLPIGFEIKSHII 1208
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8181039 8188219 - Tan0008852.8 Tan11g1039 767976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1039 1208 NCBIfam HAD-IC family P-type ATPase 828 932 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan11g1039 1208 Pfam Phospholipid-translocating P-type ATPase C-terminal 877 1115 IPR032630 -
Tan11g1039 1208 MobiDBLite consensus disorder prediction 1 44 - -
Tan11g1039 1208 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 56 1114 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Tan11g1039 1208 Pfam Cation transport ATPase (P-type) 557 632 - -
Tan11g1039 1208 NCBIfam phospholipid-translocating P-type ATPase 79 1123 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Tan11g1039 1208 Gene3D - 136 307 - -
Tan11g1039 1208 FunFam Phospholipid-transporting ATPase 137 306 - -
Tan11g1039 1208 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 508 722 IPR023299 GO:0000166(InterPro)
Tan11g1039 1208 SFLD p-type atpase 432 899 IPR044492 -
Tan11g1039 1208 Gene3D - 551 683 IPR023299 GO:0000166(InterPro)
Tan11g1039 1208 SUPERFAMILY Calcium ATPase, transmembrane domain M 79 1113 IPR023298 -
Tan11g1039 1208 PRINTS P-type cation-transporting ATPase superfamily signature 848 867 - -
Tan11g1039 1208 PRINTS P-type cation-transporting ATPase superfamily signature 449 463 - -
Tan11g1039 1208 PRINTS P-type cation-transporting ATPase superfamily signature 732 742 - -
Tan11g1039 1208 Gene3D - 705 888 IPR023214 -
Tan11g1039 1208 SUPERFAMILY HAD-like 436 889 IPR036412 -
Tan11g1039 1208 SUPERFAMILY Calcium ATPase, transduction domain A 162 303 IPR008250 -
Tan11g1039 1208 ProSitePatterns E1-E2 ATPases phosphorylation site. 451 457 IPR018303 -
Tan11g1039 1208 SFLD C1.7: P-type atpase like 432 899 - -
Tan11g1039 1208 Coils Coil 685 705 - -
Tan11g1039 1208 Pfam Phospholipid-translocating ATPase N-terminal 65 131 IPR032631 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g1032 Tan-Chr11:8181039 Tan11g1039 Tan-Chr11:8181039 0.00E+00 dispersed
Tan11g1035 Tan-Chr11:8181039 Tan11g1039 Tan-Chr11:8181039 0.00E+00 dispersed
Tan11g1036 Tan-Chr11:8181039 Tan11g1039 Tan-Chr11:8181039 0.00E+00 dispersed
Tan11g1037 Tan-Chr11:8181039 Tan11g1039 Tan-Chr11:8181039 0.00E+00 dispersed
Tan11g1039 Tan-Chr11:8181039 Tan11g1042 Tan-Chr11:8209222 0.00E+00 dispersed
Tan11g1038 Tan-Chr11:8181039 Tan11g1039 Tan-Chr11:8181039 0.00E+00 tandem
Tan11g1039 Tan-Chr11:8181039 Tan11g1040 Tan-Chr11:8196876 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1039 K14802 - csv:101212953 1775.76