Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1040 ATGGATTCTACAACAACCCCAAAAGAGAACTCGGCGAATATCCAACTCGCTGACGGCGCTTCCTTGGGGCCGAGTCAATCGTCGGTGCAATCGAAGTCCTCGATTCCGCAAGTGGGTTCAAGTGGTTCTGGTTCGAAGCCCGTCCCTCGAGGTGCCGGTTCCACTGTCCAGAACGAGAACGACGAGGAACTTGAGAGGTTTGTTTACATTGGTGATCCTGAAAAGACGAATGAGAATTCTGGGTTCGCTGGAAATTCGATTCGTACTGGCAAGTATACGATTCTAAATTTTCTGCCCAGGAATCTGTTTGAACAATTTCATAGAATTGCTTATGTATATTTCCTTGTTGTTTCGGTTCTTAATCAACTCCCCCAGCTTTCCGTTTTTGGTCGGGGAGTCTCCATTTTGCCTCTAGTTTCTGTGCTGCTAGTTACAGCAGTTAAAGATGCATATGAGGATTGGAGAAGGCACCGTTCTGATGAGATTGAGAACAATCGGTTTGCTTTAGTTTTGGTGAACGGTGAGTTTCAATCGAAGAAATGGAAGGATATTAGAGTTGGTGAAATAATTAAAATTGGTGCAAATGAACCTATTCCTTGTGATATGATGCTTCTCTCAACCAGCTGTGCCGCAGGGGTTGCTTATTTGCAGACTCTGAATTTTGATGGGGAACCAACTTTGAAAACTATGTATGCAAGACGAGAAACATTGTCGAAAATGCGTGACAAGGAAAAGATTGATGGGTTGATTAAGTGTGGATATCCAAATAGGAATATCTATCAATTTTATGCTGATTTGGAGATTGATGGGAAGCGTCTATCCCTTACGCATTCAAACATGGTTCTTCGTGGCTGTGAGCTCAAGAATACTAGCTGGGCTGTTGGTGTTGCTGTATACGCTGGCCATGAGACCAAAGCCATGCTTAACAGTTCCATTGCTCCATTAAAAAGAAGCCGGCTCGAAACTCAGAAGGACAGGGAGATTATGATACTCTCTTTGTTTCTTATTGTTTTGTGTACAGTCGTTTGTGTTTGTGCAGCTGTTTGGTTCATCAGAAAGGGGGATGCTTTGGACATTTTGCCTTATTTCAGAAAGAAGGATTTCTCAGTAGACCCACCTGAAACCTACAATTACCATGGCTGGGGATTGGATGTATTTTTTATATTCCTAATGTCAGTCATTTTGTTTCAGATCATGATCCCCATTTCACTTTACATTTCAATGGAGCTTGTTCGCATCGGCCAGGCTTATTTAATGATTCGAGATACCCAAATGTATGATGAAACATCGAATTCAAGATTTCAGTGTCAGGCTTTGAACATAAATGAGGATTTAGGACAAGTGAGGTATGTGTTTTTGGACAAAACAGGCACCCTTACTGAGAATAAAATGGAATTTCAATGCGCAAGCATTTGGGGAATCAGTTATGGAGGTGAAACAACAAATCTCTCAGACGAGCAAATTGGATTCTCTGTTCAGGCTGATCATTTTTTGTGTTTTGCAACAGTGAATGAAAAGGTTTTGAGACCAAAAACAATTGTTAAAACAAATTCCGAGCTTCTGCGATTATTAAAAAGTGGAAAGTACACCAAGGAAGGAGGATATATTCATGATTTCTTCCTTGCATTAGCTGCTTGCAATACCATTATTCCTCTCATTATCGAAACTTCTGATCCTTCAATGCAATTAATTGACTACGAAGGGCAGTTTCCAGATGAACTGACATTGGCTTATGCTGCTGCAGCATATGGTTATATGCTAATCGAACGAGCTTTTCATTATATAGTTATTGACATACATGGTGAAAGGCAAAGGTATAGTGTTTTGGGAATACATGAATTTGATAGTGAGAGGAAGCGGATGTCGGTGGTACTTAGGTGTCCTGACATGACCTATAAAGTATTTGTAAAAGGTGCGGATACCTCCATGTTCAAGGTGATGGATGAAACTCTGAACATGGATATTATTCAAGCGACTAAAGCGCATCTTGATTCATACTCCTCAAAAGGACTCAGGACATTAGTTATTGGGATGAAAGAACTCAATCCTTCCGACTTTGAGAAATGGCACTTGATGTATGAGGAAGCAAGCATTGCTCTGGATGGTAGGGGTGCTTTGCTTCGCAAGGTTGCCAGCAGCATAGAAAACAATCTATGCATATTGGGCGCCATAGGCATCGAAGATAAGTTGCAAAAAGGTGTGCCAGAAGCCATGGAATCTTTAAGAACGGCAGGAATTAAAGTATGGGTTTTGACTGGGGACAAGCAAGAAACTGCCATATCAGTTGGTTACTCCTCAAGGGTCTTAACAAACAACATGGCCCAACTTATAATTAACAGCGACTCAGCAGAATCATGCAGAAGGAGTTTAGAAAATGCAATAATCATGTTGAAGAAGCATGCTAGTGTCTTAGGGGTTACACTGGATTGTGGAAAAGGAATGGAAGCTGTAACACCTGCAGTTGCATTGATCATTGATGGTTCCAGCCTCGTATATATTCTTGGTAGTGAACTCGAAGAGCAGCTTTTCGAATTAGCTTCTACCTGTTCGGTTGTGTTATGTTCCCGGGTTGCTCCGTTGCAGAAATCTTTAATTGTTGCTCTTGTTAAGAGAAAGACTTCTGATGTGACACTTGCCTTTGGTGATGGTGTGAATGATGTGCAAATGATCCAAACGGCAGATGTAGGCATTGCTCTCAGTGGTCCAGAGGGTCAGCAAGCTGTCACGGCATCAGATTTTGCCTTGGGTCAATTTAGATTCTTGGTTTCTCTTCTATTGGTCCATGGACATTGGAATTACCAGCGAATGGGCTACATGATTCTGTCCAACTTTTACAGAAATGTAGTGATTGTGCTTGTTTTATTTTGGTATGTTCTCTTTACTGGTTTCTCGTTGACGACGGCAATCAACCAATGGAGCAGTATGCTTTATACTATAATCTATACTTGTTTGCCCACCATTGTTGTTGGAATTCTTGACCAGGACTTGGGTAGAAGGATTCTTCTTAGTTGCCCTCAGCTCTATAGGATTGGCCATAGACAGGAGAGTTACAACTCTAGATTGTTTTGGTTAACAATGATTGACGCTGTGTGGCAGAGTGTTGCTATTTTCTTCATCCCCCTCCTTGCATACTGGGCTACCACCATTGATGATTCAAGCCTTGGTGATCTCTGGCTACTTGCCTTAGTCATTGTTGTCAACTTGCACTTGGCGATGGACGTCGTTCGATGGTATTCCATTACCCACGTTGTGATTTGGGGATCTACTCTCGCAACTGTAATTTGTGTCATTATCCTTGATTCGTTAGTGTCACTCCCTAGTTATTGGGCGATATATCATGTAGCGGGCACGATGTCCTTTTGGCTATGTTTGTTAGTGATCATCGTAGTAGCATTACTTCCTCGTTTTGTTGTAAAATGTCTATATCAGTATTGTCGTCCATGCGACATCCAGGTAGCAAGGGAGGGTGAAAAATTTGGAAGAACAAGAGAGTTGGGAGTTGTACAACAGAGATGA 3516 41.75 MDSTTTPKENSANIQLADGASLGPSQSSVQSKSSIPQVGSSGSGSKPVPRGAGSTVQNENDEELERFVYIGDPEKTNENSGFAGNSIRTGKYTILNFLPRNLFEQFHRIAYVYFLVVSVLNQLPQLSVFGRGVSILPLVSVLLVTAVKDAYEDWRRHRSDEIENNRFALVLVNGEFQSKKWKDIRVGEIIKIGANEPIPCDMMLLSTSCAAGVAYLQTLNFDGEPTLKTMYARRETLSKMRDKEKIDGLIKCGYPNRNIYQFYADLEIDGKRLSLTHSNMVLRGCELKNTSWAVGVAVYAGHETKAMLNSSIAPLKRSRLETQKDREIMILSLFLIVLCTVVCVCAAVWFIRKGDALDILPYFRKKDFSVDPPETYNYHGWGLDVFFIFLMSVILFQIMIPISLYISMELVRIGQAYLMIRDTQMYDETSNSRFQCQALNINEDLGQVRYVFLDKTGTLTENKMEFQCASIWGISYGGETTNLSDEQIGFSVQADHFLCFATVNEKVLRPKTIVKTNSELLRLLKSGKYTKEGGYIHDFFLALAACNTIIPLIIETSDPSMQLIDYEGQFPDELTLAYAAAAYGYMLIERAFHYIVIDIHGERQRYSVLGIHEFDSERKRMSVVLRCPDMTYKVFVKGADTSMFKVMDETLNMDIIQATKAHLDSYSSKGLRTLVIGMKELNPSDFEKWHLMYEEASIALDGRGALLRKVASSIENNLCILGAIGIEDKLQKGVPEAMESLRTAGIKVWVLTGDKQETAISVGYSSRVLTNNMAQLIINSDSAESCRRSLENAIIMLKKHASVLGVTLDCGKGMEAVTPAVALIIDGSSLVYILGSELEEQLFELASTCSVVLCSRVAPLQKSLIVALVKRKTSDVTLAFGDGVNDVQMIQTADVGIALSGPEGQQAVTASDFALGQFRFLVSLLLVHGHWNYQRMGYMILSNFYRNVVIVLVLFWYVLFTGFSLTTAINQWSSMLYTIIYTCLPTIVVGILDQDLGRRILLSCPQLYRIGHRQESYNSRLFWLTMIDAVWQSVAIFFIPLLAYWATTIDDSSLGDLWLLALVIVVNLHLAMDVVRWYSITHVVIWGSTLATVICVIILDSLVSLPSYWAIYHVAGTMSFWLCLLVIIVVALLPRFVVKCLYQYCRPCDIQVAREGEKFGRTRELGVVQQR 1171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8196876 8201899 - Tan0017427.1 Tan11g1040 767977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1040 1171 Pfam Phospholipid-translocating ATPase N-terminal 68 134 IPR032631 -
Tan11g1040 1171 SFLD p-type atpase 436 931 IPR044492 -
Tan11g1040 1171 Gene3D - 140 311 - -
Tan11g1040 1171 SUPERFAMILY Calcium ATPase, transmembrane domain M 83 1146 IPR023298 -
Tan11g1040 1171 Pfam Phospholipid-translocating P-type ATPase C-terminal 908 1147 IPR032630 -
Tan11g1040 1171 NCBIfam phospholipid-translocating P-type ATPase 82 1155 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Tan11g1040 1171 ProSitePatterns E1-E2 ATPases phosphorylation site. 454 460 IPR018303 -
Tan11g1040 1171 Gene3D - 569 703 IPR023299 GO:0000166(InterPro)
Tan11g1040 1171 SUPERFAMILY Calcium ATPase, transduction domain A 165 306 IPR008250 -
Tan11g1040 1171 SUPERFAMILY HAD-like 439 921 IPR036412 -
Tan11g1040 1171 Pfam Cation transport ATPase (P-type) 593 645 - -
Tan11g1040 1171 NCBIfam HAD-IC family P-type ATPase 850 964 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan11g1040 1171 SFLD Haloacid Dehalogenase 436 931 - -
Tan11g1040 1171 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 59 1140 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Tan11g1040 1171 Gene3D - 717 920 IPR023214 -
Tan11g1040 1171 FunFam Phospholipid-transporting ATPase 140 309 - -
Tan11g1040 1171 FunFam Phospholipid-transporting ATPase 721 920 - -
Tan11g1040 1171 Pfam E1-E2 ATPase 167 406 - -
Tan11g1040 1171 PRINTS P-type cation-transporting ATPase superfamily signature 452 466 - -
Tan11g1040 1171 PRINTS P-type cation-transporting ATPase superfamily signature 880 899 - -
Tan11g1040 1171 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 458 734 IPR023299 GO:0000166(InterPro)
Tan11g1040 1171 MobiDBLite consensus disorder prediction 1 57 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g1040 Tan-Chr11:8196876 Tan11g2053 Tan-Chr11:43586445 1.70E-165 dispersed
Tan11g1040 Tan-Chr11:8196876 Tan11g1042 Tan-Chr11:8209222 0.00E+00 proximal
Tan11g1039 Tan-Chr11:8181039 Tan11g1040 Tan-Chr11:8196876 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1040 K14802 - csv:101212953 1712.58