Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g1040 | ATGGATTCTACAACAACCCCAAAAGAGAACTCGGCGAATATCCAACTCGCTGACGGCGCTTCCTTGGGGCCGAGTCAATCGTCGGTGCAATCGAAGTCCTCGATTCCGCAAGTGGGTTCAAGTGGTTCTGGTTCGAAGCCCGTCCCTCGAGGTGCCGGTTCCACTGTCCAGAACGAGAACGACGAGGAACTTGAGAGGTTTGTTTACATTGGTGATCCTGAAAAGACGAATGAGAATTCTGGGTTCGCTGGAAATTCGATTCGTACTGGCAAGTATACGATTCTAAATTTTCTGCCCAGGAATCTGTTTGAACAATTTCATAGAATTGCTTATGTATATTTCCTTGTTGTTTCGGTTCTTAATCAACTCCCCCAGCTTTCCGTTTTTGGTCGGGGAGTCTCCATTTTGCCTCTAGTTTCTGTGCTGCTAGTTACAGCAGTTAAAGATGCATATGAGGATTGGAGAAGGCACCGTTCTGATGAGATTGAGAACAATCGGTTTGCTTTAGTTTTGGTGAACGGTGAGTTTCAATCGAAGAAATGGAAGGATATTAGAGTTGGTGAAATAATTAAAATTGGTGCAAATGAACCTATTCCTTGTGATATGATGCTTCTCTCAACCAGCTGTGCCGCAGGGGTTGCTTATTTGCAGACTCTGAATTTTGATGGGGAACCAACTTTGAAAACTATGTATGCAAGACGAGAAACATTGTCGAAAATGCGTGACAAGGAAAAGATTGATGGGTTGATTAAGTGTGGATATCCAAATAGGAATATCTATCAATTTTATGCTGATTTGGAGATTGATGGGAAGCGTCTATCCCTTACGCATTCAAACATGGTTCTTCGTGGCTGTGAGCTCAAGAATACTAGCTGGGCTGTTGGTGTTGCTGTATACGCTGGCCATGAGACCAAAGCCATGCTTAACAGTTCCATTGCTCCATTAAAAAGAAGCCGGCTCGAAACTCAGAAGGACAGGGAGATTATGATACTCTCTTTGTTTCTTATTGTTTTGTGTACAGTCGTTTGTGTTTGTGCAGCTGTTTGGTTCATCAGAAAGGGGGATGCTTTGGACATTTTGCCTTATTTCAGAAAGAAGGATTTCTCAGTAGACCCACCTGAAACCTACAATTACCATGGCTGGGGATTGGATGTATTTTTTATATTCCTAATGTCAGTCATTTTGTTTCAGATCATGATCCCCATTTCACTTTACATTTCAATGGAGCTTGTTCGCATCGGCCAGGCTTATTTAATGATTCGAGATACCCAAATGTATGATGAAACATCGAATTCAAGATTTCAGTGTCAGGCTTTGAACATAAATGAGGATTTAGGACAAGTGAGGTATGTGTTTTTGGACAAAACAGGCACCCTTACTGAGAATAAAATGGAATTTCAATGCGCAAGCATTTGGGGAATCAGTTATGGAGGTGAAACAACAAATCTCTCAGACGAGCAAATTGGATTCTCTGTTCAGGCTGATCATTTTTTGTGTTTTGCAACAGTGAATGAAAAGGTTTTGAGACCAAAAACAATTGTTAAAACAAATTCCGAGCTTCTGCGATTATTAAAAAGTGGAAAGTACACCAAGGAAGGAGGATATATTCATGATTTCTTCCTTGCATTAGCTGCTTGCAATACCATTATTCCTCTCATTATCGAAACTTCTGATCCTTCAATGCAATTAATTGACTACGAAGGGCAGTTTCCAGATGAACTGACATTGGCTTATGCTGCTGCAGCATATGGTTATATGCTAATCGAACGAGCTTTTCATTATATAGTTATTGACATACATGGTGAAAGGCAAAGGTATAGTGTTTTGGGAATACATGAATTTGATAGTGAGAGGAAGCGGATGTCGGTGGTACTTAGGTGTCCTGACATGACCTATAAAGTATTTGTAAAAGGTGCGGATACCTCCATGTTCAAGGTGATGGATGAAACTCTGAACATGGATATTATTCAAGCGACTAAAGCGCATCTTGATTCATACTCCTCAAAAGGACTCAGGACATTAGTTATTGGGATGAAAGAACTCAATCCTTCCGACTTTGAGAAATGGCACTTGATGTATGAGGAAGCAAGCATTGCTCTGGATGGTAGGGGTGCTTTGCTTCGCAAGGTTGCCAGCAGCATAGAAAACAATCTATGCATATTGGGCGCCATAGGCATCGAAGATAAGTTGCAAAAAGGTGTGCCAGAAGCCATGGAATCTTTAAGAACGGCAGGAATTAAAGTATGGGTTTTGACTGGGGACAAGCAAGAAACTGCCATATCAGTTGGTTACTCCTCAAGGGTCTTAACAAACAACATGGCCCAACTTATAATTAACAGCGACTCAGCAGAATCATGCAGAAGGAGTTTAGAAAATGCAATAATCATGTTGAAGAAGCATGCTAGTGTCTTAGGGGTTACACTGGATTGTGGAAAAGGAATGGAAGCTGTAACACCTGCAGTTGCATTGATCATTGATGGTTCCAGCCTCGTATATATTCTTGGTAGTGAACTCGAAGAGCAGCTTTTCGAATTAGCTTCTACCTGTTCGGTTGTGTTATGTTCCCGGGTTGCTCCGTTGCAGAAATCTTTAATTGTTGCTCTTGTTAAGAGAAAGACTTCTGATGTGACACTTGCCTTTGGTGATGGTGTGAATGATGTGCAAATGATCCAAACGGCAGATGTAGGCATTGCTCTCAGTGGTCCAGAGGGTCAGCAAGCTGTCACGGCATCAGATTTTGCCTTGGGTCAATTTAGATTCTTGGTTTCTCTTCTATTGGTCCATGGACATTGGAATTACCAGCGAATGGGCTACATGATTCTGTCCAACTTTTACAGAAATGTAGTGATTGTGCTTGTTTTATTTTGGTATGTTCTCTTTACTGGTTTCTCGTTGACGACGGCAATCAACCAATGGAGCAGTATGCTTTATACTATAATCTATACTTGTTTGCCCACCATTGTTGTTGGAATTCTTGACCAGGACTTGGGTAGAAGGATTCTTCTTAGTTGCCCTCAGCTCTATAGGATTGGCCATAGACAGGAGAGTTACAACTCTAGATTGTTTTGGTTAACAATGATTGACGCTGTGTGGCAGAGTGTTGCTATTTTCTTCATCCCCCTCCTTGCATACTGGGCTACCACCATTGATGATTCAAGCCTTGGTGATCTCTGGCTACTTGCCTTAGTCATTGTTGTCAACTTGCACTTGGCGATGGACGTCGTTCGATGGTATTCCATTACCCACGTTGTGATTTGGGGATCTACTCTCGCAACTGTAATTTGTGTCATTATCCTTGATTCGTTAGTGTCACTCCCTAGTTATTGGGCGATATATCATGTAGCGGGCACGATGTCCTTTTGGCTATGTTTGTTAGTGATCATCGTAGTAGCATTACTTCCTCGTTTTGTTGTAAAATGTCTATATCAGTATTGTCGTCCATGCGACATCCAGGTAGCAAGGGAGGGTGAAAAATTTGGAAGAACAAGAGAGTTGGGAGTTGTACAACAGAGATGA | 3516 | 41.75 | MDSTTTPKENSANIQLADGASLGPSQSSVQSKSSIPQVGSSGSGSKPVPRGAGSTVQNENDEELERFVYIGDPEKTNENSGFAGNSIRTGKYTILNFLPRNLFEQFHRIAYVYFLVVSVLNQLPQLSVFGRGVSILPLVSVLLVTAVKDAYEDWRRHRSDEIENNRFALVLVNGEFQSKKWKDIRVGEIIKIGANEPIPCDMMLLSTSCAAGVAYLQTLNFDGEPTLKTMYARRETLSKMRDKEKIDGLIKCGYPNRNIYQFYADLEIDGKRLSLTHSNMVLRGCELKNTSWAVGVAVYAGHETKAMLNSSIAPLKRSRLETQKDREIMILSLFLIVLCTVVCVCAAVWFIRKGDALDILPYFRKKDFSVDPPETYNYHGWGLDVFFIFLMSVILFQIMIPISLYISMELVRIGQAYLMIRDTQMYDETSNSRFQCQALNINEDLGQVRYVFLDKTGTLTENKMEFQCASIWGISYGGETTNLSDEQIGFSVQADHFLCFATVNEKVLRPKTIVKTNSELLRLLKSGKYTKEGGYIHDFFLALAACNTIIPLIIETSDPSMQLIDYEGQFPDELTLAYAAAAYGYMLIERAFHYIVIDIHGERQRYSVLGIHEFDSERKRMSVVLRCPDMTYKVFVKGADTSMFKVMDETLNMDIIQATKAHLDSYSSKGLRTLVIGMKELNPSDFEKWHLMYEEASIALDGRGALLRKVASSIENNLCILGAIGIEDKLQKGVPEAMESLRTAGIKVWVLTGDKQETAISVGYSSRVLTNNMAQLIINSDSAESCRRSLENAIIMLKKHASVLGVTLDCGKGMEAVTPAVALIIDGSSLVYILGSELEEQLFELASTCSVVLCSRVAPLQKSLIVALVKRKTSDVTLAFGDGVNDVQMIQTADVGIALSGPEGQQAVTASDFALGQFRFLVSLLLVHGHWNYQRMGYMILSNFYRNVVIVLVLFWYVLFTGFSLTTAINQWSSMLYTIIYTCLPTIVVGILDQDLGRRILLSCPQLYRIGHRQESYNSRLFWLTMIDAVWQSVAIFFIPLLAYWATTIDDSSLGDLWLLALVIVVNLHLAMDVVRWYSITHVVIWGSTLATVICVIILDSLVSLPSYWAIYHVAGTMSFWLCLLVIIVVALLPRFVVKCLYQYCRPCDIQVAREGEKFGRTRELGVVQQR | 1171 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8196876 | 8201899 | - | Tan0017427.1 | Tan11g1040 | 767977 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g1040 | 1171 | Pfam | Phospholipid-translocating ATPase N-terminal | 68 | 134 | IPR032631 | - | |
Tan11g1040 | 1171 | SFLD | p-type atpase | 436 | 931 | IPR044492 | - | |
Tan11g1040 | 1171 | Gene3D | - | 140 | 311 | - | - | |
Tan11g1040 | 1171 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 83 | 1146 | IPR023298 | - | |
Tan11g1040 | 1171 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 908 | 1147 | IPR032630 | - | |
Tan11g1040 | 1171 | NCBIfam | phospholipid-translocating P-type ATPase | 82 | 1155 | IPR006539 | GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro) | |
Tan11g1040 | 1171 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 454 | 460 | IPR018303 | - | |
Tan11g1040 | 1171 | Gene3D | - | 569 | 703 | IPR023299 | GO:0000166(InterPro) | |
Tan11g1040 | 1171 | SUPERFAMILY | Calcium ATPase, transduction domain A | 165 | 306 | IPR008250 | - | |
Tan11g1040 | 1171 | SUPERFAMILY | HAD-like | 439 | 921 | IPR036412 | - | |
Tan11g1040 | 1171 | Pfam | Cation transport ATPase (P-type) | 593 | 645 | - | - | |
Tan11g1040 | 1171 | NCBIfam | HAD-IC family P-type ATPase | 850 | 964 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Tan11g1040 | 1171 | SFLD | Haloacid Dehalogenase | 436 | 931 | - | - | |
Tan11g1040 | 1171 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 59 | 1140 | - | GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER) | |
Tan11g1040 | 1171 | Gene3D | - | 717 | 920 | IPR023214 | - | |
Tan11g1040 | 1171 | FunFam | Phospholipid-transporting ATPase | 140 | 309 | - | - | |
Tan11g1040 | 1171 | FunFam | Phospholipid-transporting ATPase | 721 | 920 | - | - | |
Tan11g1040 | 1171 | Pfam | E1-E2 ATPase | 167 | 406 | - | - | |
Tan11g1040 | 1171 | PRINTS | P-type cation-transporting ATPase superfamily signature | 452 | 466 | - | - | |
Tan11g1040 | 1171 | PRINTS | P-type cation-transporting ATPase superfamily signature | 880 | 899 | - | - | |
Tan11g1040 | 1171 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 458 | 734 | IPR023299 | GO:0000166(InterPro) | |
Tan11g1040 | 1171 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan11g1040 | Tan-Chr11:8196876 | Tan11g2053 | Tan-Chr11:43586445 | 1.70E-165 | dispersed | |
Tan11g1040 | Tan-Chr11:8196876 | Tan11g1042 | Tan-Chr11:8209222 | 0.00E+00 | proximal | |
Tan11g1039 | Tan-Chr11:8181039 | Tan11g1040 | Tan-Chr11:8196876 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g1040 | K14802 | - | csv:101212953 | 1712.58 |