Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1042 ATGGATTCTTCAACAACCCCAAATGAGAACTCGGCGAATATCGAACTCGCTGGTTGCGCTACCTCGGGGCCGAGTCAATCGTCGGTGCAATCGAAGTCCTCGATTCCGGAAGTGGGTTCTAGTGGTTCCGTCCTTCAAGGGTCTCGAGGTGACGGTTCCACTGTCCAGAATGAGATCGACGAGGAACTTGAGAGGTTGGTTTACATTGGTGATCCTGAAAAGACGAACGAGAATTCTGAGTTCGCTGGAAATTCGATTCGTACTGGCAAGTATACGATTCTAAATTTCCTGCCCAGGAATCTGTTTGAACAATTTCATAGAATTGCTTATGTATATTTCCTTGTTGTTTCGGTTCTTAATCAACTCCCCCAGCTTTCCATTTTTGGTCGGGGAGTCTCCATTTTGCCTCTAGTTTCTGTGCTGCTAGTTACTGCAGTTAAAGATGCATATGAGGATTGGAGAAGGCATCGTTCTGATGAGATTGAGAACAATCGGTTAGCTTTAGTTTTGGTGAAGGGTGAGTTTCAATCGAAGAAATGGAAGGATATTAGAGTTGGCGAAATAATTAAAATTGGTGCAAATGAGTCTATTCCTTGTGATATGATGCTTCTCTCAACGAGCGATTCTGAAGGGCTTGCGTATATGCAGACTCTGAATTTGGATGGGGGACCAACTTTGAAAACCACGTATGCAAGACAAGAAACAATGTCCAAAATGTGTGACAAGGAAAAGATTGCTGGCTTGATTAAATGTGGATATCCAAATAGGAATATCTATCAATTTTTTGTTGAGTTGGAGATTGATGGGAAGCGTCTATCCCTTACACATTCAAACATAGTTCTTCGTGGCTGTGAGCTCAAGAATACCAGCTGGGCTGTTGGTGTTGCCGTATATGCTGGCCGTGAGACCAAAGCCATGCTTAACAGTTCTGTTGCTCCATTGAAAAGAAGCCGGCTCGAGAGTCGGAAGGACAGGGAGATTATGATACTCTCTTTGTTTCTTGTTGCTTTGTGTACAATCGTTTGTGTTTGTGCTGCTGTCTGGTTCATCGGGAAGGGGGAAGATTTGAACATCTTACCTTATTTCAGAAACAAGGATTTCTCAGTAGACCCACCTGAAACCTATAATTACCATGGCTGGGGCTTGGATGCATTTTTTGTATTCCTAATGTCAGTCATTTTGTTTCAGATCATGATCCCCATTTCACTTTACATTTCAATGGAGCTTGTTCGCATTGGTCAGGCTTATTTCATGATTCGAGACACCCAAATGTATGATGAAACATCAAATTCAAAATTTCAGTGTCGGGCTTTGAACATAAATGAGGATTTAGGACAAGTGAGGTATGTGTTTTTGGACAAAACAGGTACCCTTACTGAGAATAAGATGGAATTTCAATGCGCAAGCATATGGGGAATCAATTATGAAGGTGAAACAACCAATCCCTCGGACGATCAAATTGGATTCTCTGTTCAGGTGGATGGAAAAGTTTTGAGACCAAAGATGGCCGTCAAAACCAATTCTGAACTTTTGCGGTTATTAAGAAGTGGAAAATACACCAAGGAAGGGAGATGTATTCATGATTTCTTCCTTGCATTAGCCACTTGCAATACTGTTTTTCCTCTCATTACCAAAACTTCTGATCCTTCGGTGCAGTTAGTTGACTACCTAGGGGAGTCTCCAGATGAATTGGCATTGGCTTATGCTGCTACGACATATGGTTTTACGCTAATTAAACGAGCTGCTGGCCATATAGTTATTGACATACACGGTGAAGAGCAAAGGTATAATGTTTTGGGAATGCATGAGTTTGATAGTGAGAGGAAGCGGATGTTGGTGGTACTGGGGTGCCCTGACATGACCTTCAAGGTATTTGTAAAAGGTGCTGATACCTCCATGTTCAAGGTGATGGATGAAACTCTGAACATGGATATTATTCAAGCGAGTAAAGCGCATCTTGATTCATACTCCTCAAAAGGACTCAGGACATTAGTTATTGGGATGAAAGAACTCAATCCTTCCGACTTTGAGAAATGGCACTTGATGTATGAGGAAGCAAGCATTGCTCTGGGTGGTAGGGTTGCTTTGCTTCGCAAGGTTGCCAGCAGCATAGAAAACAATCTATGCATACTGGGTGCCGTAGGCATCGAAGATAAGTTGCAAAAAGGTGTGCCAGAAGCCATGGAATCTTTAAGGACGGCAGGAATTAAAGTATGGGTTTTGACTGGGGATAAGCAAGAAACTGTCATATCAATTGGTTACTCCTCGAGGCTCTTAACAAACAAGATGACCCAACTTATAATTAACAGCGACTCAGCAGAATCATGCCGAAGTAGTCTAGAAAATGCAATAATCATGTTGAGGAAGCATGCTAGTGTGTTAGGGGCTACACTGGACAGTGGAAAAGGCATTGAAGCTATAACACCTTCGGTTGCATTGATCATTGATGGTGCCAGCCTCGTATATATTCTTGAAACTGAACTCGAAGAACAGCTTTTCGAACTAGCTTCCATCTGTTCGGTTGTCTTATGTTCTCGGGTCGCTCCATTTCAAAAATCTGGAATCGTTGCTCTTGTTAAGAGAAAGACTTCTGACGTGACACTTGCCTTTGGTGATGGTGCGAATGATGTGGGAATGATCCAAATGGCAGATGTAGGCATTGCTCTCAGTGGTCCAGAGGGTCAACAAGCTGTCACGGCATCAGATTTTGCCATGGGGCAATTTAGATTCTTGGTTCCTCTTCTCTTGGTCCATGGACATTGGAATTACCAGCGGATGGGCTACATGATTCTGCGCAACTTCTACAGAAATGCAGTATTTGTGCTTGTTTTATTTTGGTATGTTCTGTTTACTGGTTTCTCGTTGACGACGGTGATCAACCAATGGAGCAGTATGCTTTATACTATAATCTATACTTGTTTGCCCACAATTGTCGTTGGGATTCTTGACAAGGACTTGGGTAGAAGGATTCTTCTTAGTTATCCTCAGCTCTATAGAGTCGGCCACAGACATGAGAGCTACAACTCTAGACTGTTTTGGTTAACAATGATCGACTCTGTGTGGCAAAGTATTGCTATTTTTTTCATCCCCCTCCTTGCATACTGGGCTACCACCATTGATGATTCGAGCCTTGGTGATCTCTGGCTACTTGCCTTAGTCATCGTTGTCAACCTACACTTGGCGATGGATGTCGTTCGATGGCATTTCATCACCCATGTTGCAATTTGGGGATCCATTCTCACAATTGTCATTTGTGTCATTATCCTTGATTCGTTAGTGTCACTCCCCGGTTATTGGGCGATATATCAAGTGGCGAGCATGGCACCTTTTTGGCTATGTTTGTTAGCGATCGTCGTAGTAGCATTACTTCCTCGTTTTTTCCTAAAATATCTTTACCAGTATTGTAGTCCATGTGATATCCAGATAGCAAGAGAGGCTGATAAATTTGGAAGGACAAGAGAGTTGGGAGTTGTACAACAGAGATGA 3486 42.66 MDSSTTPNENSANIELAGCATSGPSQSSVQSKSSIPEVGSSGSVLQGSRGDGSTVQNEIDEELERLVYIGDPEKTNENSEFAGNSIRTGKYTILNFLPRNLFEQFHRIAYVYFLVVSVLNQLPQLSIFGRGVSILPLVSVLLVTAVKDAYEDWRRHRSDEIENNRLALVLVKGEFQSKKWKDIRVGEIIKIGANESIPCDMMLLSTSDSEGLAYMQTLNLDGGPTLKTTYARQETMSKMCDKEKIAGLIKCGYPNRNIYQFFVELEIDGKRLSLTHSNIVLRGCELKNTSWAVGVAVYAGRETKAMLNSSVAPLKRSRLESRKDREIMILSLFLVALCTIVCVCAAVWFIGKGEDLNILPYFRNKDFSVDPPETYNYHGWGLDAFFVFLMSVILFQIMIPISLYISMELVRIGQAYFMIRDTQMYDETSNSKFQCRALNINEDLGQVRYVFLDKTGTLTENKMEFQCASIWGINYEGETTNPSDDQIGFSVQVDGKVLRPKMAVKTNSELLRLLRSGKYTKEGRCIHDFFLALATCNTVFPLITKTSDPSVQLVDYLGESPDELALAYAATTYGFTLIKRAAGHIVIDIHGEEQRYNVLGMHEFDSERKRMLVVLGCPDMTFKVFVKGADTSMFKVMDETLNMDIIQASKAHLDSYSSKGLRTLVIGMKELNPSDFEKWHLMYEEASIALGGRVALLRKVASSIENNLCILGAVGIEDKLQKGVPEAMESLRTAGIKVWVLTGDKQETVISIGYSSRLLTNKMTQLIINSDSAESCRSSLENAIIMLRKHASVLGATLDSGKGIEAITPSVALIIDGASLVYILETELEEQLFELASICSVVLCSRVAPFQKSGIVALVKRKTSDVTLAFGDGANDVGMIQMADVGIALSGPEGQQAVTASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILRNFYRNAVFVLVLFWYVLFTGFSLTTVINQWSSMLYTIIYTCLPTIVVGILDKDLGRRILLSYPQLYRVGHRHESYNSRLFWLTMIDSVWQSIAIFFIPLLAYWATTIDDSSLGDLWLLALVIVVNLHLAMDVVRWHFITHVAIWGSILTIVICVIILDSLVSLPGYWAIYQVASMAPFWLCLLAIVVVALLPRFFLKYLYQYCSPCDIQIAREADKFGRTRELGVVQQR 1161
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8209222 8214467 - Tan0011650.1 Tan11g1042 767979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1042 1161 Pfam Cation transport ATPase (P-type) 559 635 - -
Tan11g1042 1161 FunFam Phospholipid-transporting ATPase 139 308 - -
Tan11g1042 1161 Pfam Phospholipid-translocating ATPase N-terminal 67 133 IPR032631 -
Tan11g1042 1161 Pfam Phospholipid-translocating P-type ATPase C-terminal 898 1137 IPR032630 -
Tan11g1042 1161 SUPERFAMILY HAD-like 438 911 IPR036412 -
Tan11g1042 1161 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 60 1134 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Tan11g1042 1161 FunFam Phospholipid-transporting ATPase 711 910 - -
Tan11g1042 1161 NCBIfam HAD-IC family P-type ATPase 839 954 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan11g1042 1161 SFLD p-type atpase 434 921 IPR044492 -
Tan11g1042 1161 SFLD C1.7: P-type atpase like 434 921 - -
Tan11g1042 1161 Gene3D - 707 910 IPR023214 -
Tan11g1042 1161 MobiDBLite consensus disorder prediction 1 56 - -
Tan11g1042 1161 ProSitePatterns E1-E2 ATPases phosphorylation site. 453 459 IPR018303 -
Tan11g1042 1161 SUPERFAMILY Calcium ATPase, transmembrane domain M 81 1135 IPR023298 -
Tan11g1042 1161 MobiDBLite consensus disorder prediction 1 54 - -
Tan11g1042 1161 Gene3D - 139 309 - -
Tan11g1042 1161 PRINTS P-type cation-transporting ATPase superfamily signature 870 889 - -
Tan11g1042 1161 PRINTS P-type cation-transporting ATPase superfamily signature 451 465 - -
Tan11g1042 1161 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 457 724 IPR023299 GO:0000166(InterPro)
Tan11g1042 1161 SUPERFAMILY Calcium ATPase, transduction domain A 164 305 IPR008250 -
Tan11g1042 1161 NCBIfam phospholipid-translocating P-type ATPase 81 1145 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Tan11g1042 1161 Gene3D - 563 696 IPR023299 GO:0000166(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g1038 Tan-Chr11:8181039 Tan11g1042 Tan-Chr11:8209222 0.00E+00 dispersed
Tan11g1039 Tan-Chr11:8181039 Tan11g1042 Tan-Chr11:8209222 0.00E+00 dispersed
Tan11g1042 Tan-Chr11:8209222 Tan11g2053 Tan-Chr11:43586445 4.90E-165 dispersed
Tan11g1040 Tan-Chr11:8196876 Tan11g1042 Tan-Chr11:8209222 0.00E+00 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1042 K14802 - csv:101212953 1761.89