Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g1049 | ATGGGGATTCAAACTATGGGGTCTCAGGCCGGAGGTGATCCAAATGGCAAACAATCACAATTCCAGCCATTGGTTCGTCAAAATTCACTATATAGTCTCACACTGGATGAGGTCCAAAATCAGTTGGGTGATCTAGGGAAGCCATTAATCAGCATGAACCTTGATGAGCTTCTTAAGAATGTGTGGACTGCTGAGGCCAACCAAACCATCGGTAAGGACAACGAGGACAATATCATCTTGGCTAATCAAACACCCCAACAACGTCAGGCTAGTCTTACATTGAATGGTGCTTTGAGTAAAAAGACTGTTGATGAGGTGTGGAGAGACATTCAACAAAGCAAAAACAGTGAGGAGAAGAAGTCTTGTGAACGACAACCTACCTTGGGAGAGATGACATTGGAAGATTTTCTGGTGAAAGCAGGGGTGGTTGCTGAGACGTCATCGAATAAAAAAGGTGCCGGGCCTGTTGTTGAAATCGATGCAAATATCACACCCCAGTTTCCCCAACAAGGGCAGTGGATGCAGTACCCCCAAGCTCAATATCAGCCTCAACAAGCAGCAATGATGGGAGTTTACATGTCAGGGCAGCCTATTCCCCAGCCACTGCACGTGGGGGCTGGCGCTGTGATGGATGTTCCATATGTAGACAACCAGTTGGCACTGCCAGCACCATTGATGGGAGCTTTATCTGACACACAGACATCTGGCAGGAAAAGGGGAGCGCCTGAAGACATAATTGAGAAAACTGTTGAGCGTAGACAGAAGAGGATGATCAAGAATCGGGAATCTGCCGCTCGTTCACGGGCGAGGAAGCAGGCTTATACCAATGAACTGGAGAACAAAGTTTCACGTTTGGAAGAGGAAAATGAAAGGCTCAGGAAACGGAAGGAGCTGGAAAAGATGCTACCGTTGGCTCCCTCGCCCGAACCGAAGTATCAGCTTCGAAGAACATCGTCAGCGCCGTTCTAA | 969 | 47.88 | MGIQTMGSQAGGDPNGKQSQFQPLVRQNSLYSLTLDEVQNQLGDLGKPLISMNLDELLKNVWTAEANQTIGKDNEDNIILANQTPQQRQASLTLNGALSKKTVDEVWRDIQQSKNSEEKKSCERQPTLGEMTLEDFLVKAGVVAETSSNKKGAGPVVEIDANITPQFPQQGQWMQYPQAQYQPQQAAMMGVYMSGQPIPQPLHVGAGAVMDVPYVDNQLALPAPLMGALSDTQTSGRKRGAPEDIIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKRKELEKMLPLAPSPEPKYQLRRTSSAPF | 322 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8251531 | 8257395 | + | Tan0016673.1 | Tan11g1049 | 767986 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g1049 | 322 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 255 | 270 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1049 | 322 | MobiDBLite | consensus disorder prediction | 297 | 322 | - | - | |
Tan11g1049 | 322 | FunFam | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | 250 | 302 | - | - | |
Tan11g1049 | 322 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 250 | 295 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1049 | 322 | PANTHER | CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED | 26 | 320 | IPR043452 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro) | |
Tan11g1049 | 322 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Tan11g1049 | 322 | Pfam | bZIP transcription factor | 252 | 299 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1049 | 322 | Gene3D | - | 250 | 303 | - | - | |
Tan11g1049 | 322 | CDD | bZIP_plant_BZIP46 | 252 | 306 | - | - | |
Tan11g1049 | 322 | Coils | Coil | 268 | 302 | - | - | |
Tan11g1049 | 322 | SMART | brlzneu | 248 | 320 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1049 | 322 | SUPERFAMILY | Leucine zipper domain | 252 | 297 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g2328 | Tan-Chr1:28124822 | Tan11g1049 | Tan-Chr11:8251531 | 1.20E-13 | dispersed | |
Tan01g3978 | Tan-Chr1:104604818 | Tan11g1049 | Tan-Chr11:8251531 | 5.50E-19 | dispersed | |
Tan08g1730 | Tan-Chr8:69041270 | Tan11g1049 | Tan-Chr11:8251531 | 3.20E-32 | dispersed | |
Tan09g0963 | Tan-Chr9:61635991 | Tan11g1049 | Tan-Chr11:8251531 | 7.60E-53 | dispersed | |
Tan09g0964 | Tan-Chr9:61635991 | Tan11g1049 | Tan-Chr11:8251531 | 1.40E-44 | dispersed | |
Tan11g1049 | Tan-Chr11:8251531 | Tan11g1128 | Tan-Chr11:8945029 | 7.00E-13 | dispersed | |
Tan11g1049 | Tan-Chr11:8251531 | Tan11g1050 | Tan-Chr11:8251531 | 1.90E-175 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28697 | PF00170 | bZIP_1 | 3.40E-13 | CL0018 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g1049 | K14432 | - | csv:101213915 | 542.732 |