Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g1054 | ATGATGAACACCATGGGAATCTTTGAAGATATTGGCTTTTGCCGAAATCTTGAATATTTTTCGGCTCCTCCGGGGGAACAAGAGATAGCTCGGGAGCATGAAGCTGAGGCTACTCTGGAGGAAGATTATAGCGATGAAGAGCTGGATGTTGATGAGCTTGAGAGAAGGATGTGGCGAGACCGGATGCTTTTGAGGCGACTCAAAGAACAAACAAAAGACAAGGAAGGGGCTGATAATTCAAAGCAGCGTCAATCCCAGGAGCAGGCACGAAGGAAGAAGATGTCTCGGGCTCAGGACGGGATCCTGAAATATATGTTGAAAATGATGGAGGTCTGTAAAGCTCAAGGTTTCGTTTATGGGATCATTCCTGAGAAGGGGAAGCCAGTAAGCGGAGCTTCTGATAATCTTCGTGCCTGGTGGAAAGAAAAAGTCAGATTCGATAGAAATGGCCCTGCAGCCATTGCCAAATATCAGGCTGACCATGCAATTCCTGGGAAGAATGATGACTGCAATACAGTGACATCCACGCCTCACACTTTACAAGAGCTCCAAGATACGACCCTTGGATCACTTTTGTCTGCTCTGATGCAGCACTGCGATCCGCCCCAGCGGCGTTTTCCACTGGAGAAGGGAGTTTCCCCACCGTGGTGGCCAACGGGAAACGAGGAGTGGTGGCCAGAATTGGGACTCCCCAAGGACCAGGGGCCTCCCCCTTATAAGAAGCCGCATGATCTGAAGAAGGCTTGGAAGGTCAGCGTTCTCACTGCTGTGATTAAACACATGTCGCCCGACATCGCCAAAATTCGGAAGCTTGTTCGTCAGTCTAAATGTTTGCAGGACAAGATGACTGCAAAGGAGAGTGCTACATGGCTGGCCATTGTAAACCAAGAAGAAGCCTTGGCCAGGAAAATGTATCCTGATAAATGCCCGCCTGTGTCGATTTGCGGGAGTGGATCTCTTTTAATCAGCGACACTAGTGATTACGACGTTGAAGGAGTAGAAGATGAACCAAATGTCGAAACGGAGGAAAGCAAGCCTCATGATCTCAATTTCTTTAATATGGGAGCTTCTGGACTTAGAGAGAGGCTTATGATGCCATTAGTGGGACCCCAGATTAAGGAAGAGCTCATGGAGAACAATTCAGACTTTATTCAAAAGAGGAAGCAGATGACTGATGAGTCAAATACAATGACGACTCAGAAGATATATACTTGCGAGTATTCTCAATGCCCGTATAACAGTTCGCGCCTCGGGTTTCTCGACAGGACTTCAAGAAACAACCACCAGTTGAATTGCCCATTTAGGAGTGATTCTTCCCATATATTTGGCATGCCAAGCTTTCAAACTAACGATGATAAATCATCCCCAGTGCCTCCATCCTTCAACCACTCTAAGCCACCTACTCGGCCGATGAACCCCACTCCACCCTTCAGGGTATCGGGACTTGGACTTCCAGAAGATGGCCAGAAAATGATCACTGACCTTCTGAGTTTCTACGATTCCAACCATCAACAGGACAAAAACTTGAATTCCGGGAACGTCGAAGCAAGAGACGATCACAACTCACAGCTGCCAAAATTCCAACTCCAAGTTGATGATAACTTGTATTGCCAAGGAGCAATGGTGGGAAATAATAGCATGCCAATGCAGCACGTTGATTTTTCTTCCACAAAAGTACCATTCGACGAGTACAAGGCGTTCGATTCTCCCTTCGGCATGTATCCCAACGATAACATTCCGGACTTCAGATTTGGTTCTCCATTTAACTTGGCATCAATTGATTATCCAGTAGACCCACCGTTGCCAAAGCAAGATACACAGTTGTGGTACCTTTGA | 1836 | 46.9 | MMNTMGIFEDIGFCRNLEYFSAPPGEQEIAREHEAEATLEEDYSDEELDVDELERRMWRDRMLLRRLKEQTKDKEGADNSKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAIPGKNDDCNTVTSTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGNEEWWPELGLPKDQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIVNQEEALARKMYPDKCPPVSICGSGSLLISDTSDYDVEGVEDEPNVETEESKPHDLNFFNMGASGLRERLMMPLVGPQIKEELMENNSDFIQKRKQMTDESNTMTTQKIYTCEYSQCPYNSSRLGFLDRTSRNNHQLNCPFRSDSSHIFGMPSFQTNDDKSSPVPPSFNHSKPPTRPMNPTPPFRVSGLGLPEDGQKMITDLLSFYDSNHQQDKNLNSGNVEARDDHNSQLPKFQLQVDDNLYCQGAMVGNNSMPMQHVDFSSTKVPFDEYKAFDSPFGMYPNDNIPDFRFGSPFNLASIDYPVDPPLPKQDTQLWYL | 611 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8290917 | 8294709 | + | Tan0020763.1 | Tan11g1054 | 767991 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g1054 | 611 | MobiDBLite | consensus disorder prediction | 69 | 94 | - | - | |
Tan11g1054 | 611 | Coils | Coil | 36 | 87 | - | - | |
Tan11g1054 | 611 | Pfam | Ethylene insensitive 3, DNA-binding domain | 51 | 298 | IPR047091 | GO:0003700(InterPro) | |
Tan11g1054 | 611 | FunFam | Ethylene insensitive 3-like 1 | 83 | 161 | - | - | |
Tan11g1054 | 611 | Coils | Coil | 373 | 393 | - | - | |
Tan11g1054 | 611 | Gene3D | - | 83 | 163 | IPR023278 | GO:0003700(InterPro)|GO:0005634(InterPro) | |
Tan11g1054 | 611 | MobiDBLite | consensus disorder prediction | 460 | 474 | - | - | |
Tan11g1054 | 611 | MobiDBLite | consensus disorder prediction | 443 | 459 | - | - | |
Tan11g1054 | 611 | MobiDBLite | consensus disorder prediction | 443 | 474 | - | - | |
Tan11g1054 | 611 | FunFam | Ethylene insensitive 3-like 1 | 171 | 308 | - | - | |
Tan11g1054 | 611 | PANTHER | ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN | 7 | 607 | IPR006957 | GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(InterPro) | |
Tan11g1054 | 611 | Gene3D | - | 175 | 308 | IPR023278 | GO:0003700(InterPro)|GO:0005634(InterPro) | |
Tan11g1054 | 611 | SUPERFAMILY | DNA-binding domain of EIN3-like | 177 | 301 | IPR023278 | GO:0003700(InterPro)|GO:0005634(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan09g0870 | Tan-Chr9:60008748 | Tan11g1054 | Tan-Chr11:8290917 | 9.50E-96 | dispersed | |
Tan09g0871 | Tan-Chr9:60008748 | Tan11g1054 | Tan-Chr11:8290917 | 9.50E-96 | dispersed | |
Tan09g0930 | Tan-Chr9:61316748 | Tan11g1054 | Tan-Chr11:8290917 | 9.90E-205 | dispersed | |
Tan11g1054 | Tan-Chr11:8290917 | Tan11g1056 | Tan-Chr11:8290917 | 0.00E+00 | dispersed | |
Tan11g1054 | Tan-Chr11:8290917 | Tan11g1055 | Tan-Chr11:8290917 | 0.00E+00 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28699 | PF04873 | EIN3 | 2.90E-132 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g1054 | K14514 | - | csv:101214396 | 1100.12 |