Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1054 ATGATGAACACCATGGGAATCTTTGAAGATATTGGCTTTTGCCGAAATCTTGAATATTTTTCGGCTCCTCCGGGGGAACAAGAGATAGCTCGGGAGCATGAAGCTGAGGCTACTCTGGAGGAAGATTATAGCGATGAAGAGCTGGATGTTGATGAGCTTGAGAGAAGGATGTGGCGAGACCGGATGCTTTTGAGGCGACTCAAAGAACAAACAAAAGACAAGGAAGGGGCTGATAATTCAAAGCAGCGTCAATCCCAGGAGCAGGCACGAAGGAAGAAGATGTCTCGGGCTCAGGACGGGATCCTGAAATATATGTTGAAAATGATGGAGGTCTGTAAAGCTCAAGGTTTCGTTTATGGGATCATTCCTGAGAAGGGGAAGCCAGTAAGCGGAGCTTCTGATAATCTTCGTGCCTGGTGGAAAGAAAAAGTCAGATTCGATAGAAATGGCCCTGCAGCCATTGCCAAATATCAGGCTGACCATGCAATTCCTGGGAAGAATGATGACTGCAATACAGTGACATCCACGCCTCACACTTTACAAGAGCTCCAAGATACGACCCTTGGATCACTTTTGTCTGCTCTGATGCAGCACTGCGATCCGCCCCAGCGGCGTTTTCCACTGGAGAAGGGAGTTTCCCCACCGTGGTGGCCAACGGGAAACGAGGAGTGGTGGCCAGAATTGGGACTCCCCAAGGACCAGGGGCCTCCCCCTTATAAGAAGCCGCATGATCTGAAGAAGGCTTGGAAGGTCAGCGTTCTCACTGCTGTGATTAAACACATGTCGCCCGACATCGCCAAAATTCGGAAGCTTGTTCGTCAGTCTAAATGTTTGCAGGACAAGATGACTGCAAAGGAGAGTGCTACATGGCTGGCCATTGTAAACCAAGAAGAAGCCTTGGCCAGGAAAATGTATCCTGATAAATGCCCGCCTGTGTCGATTTGCGGGAGTGGATCTCTTTTAATCAGCGACACTAGTGATTACGACGTTGAAGGAGTAGAAGATGAACCAAATGTCGAAACGGAGGAAAGCAAGCCTCATGATCTCAATTTCTTTAATATGGGAGCTTCTGGACTTAGAGAGAGGCTTATGATGCCATTAGTGGGACCCCAGATTAAGGAAGAGCTCATGGAGAACAATTCAGACTTTATTCAAAAGAGGAAGCAGATGACTGATGAGTCAAATACAATGACGACTCAGAAGATATATACTTGCGAGTATTCTCAATGCCCGTATAACAGTTCGCGCCTCGGGTTTCTCGACAGGACTTCAAGAAACAACCACCAGTTGAATTGCCCATTTAGGAGTGATTCTTCCCATATATTTGGCATGCCAAGCTTTCAAACTAACGATGATAAATCATCCCCAGTGCCTCCATCCTTCAACCACTCTAAGCCACCTACTCGGCCGATGAACCCCACTCCACCCTTCAGGGTATCGGGACTTGGACTTCCAGAAGATGGCCAGAAAATGATCACTGACCTTCTGAGTTTCTACGATTCCAACCATCAACAGGACAAAAACTTGAATTCCGGGAACGTCGAAGCAAGAGACGATCACAACTCACAGCTGCCAAAATTCCAACTCCAAGTTGATGATAACTTGTATTGCCAAGGAGCAATGGTGGGAAATAATAGCATGCCAATGCAGCACGTTGATTTTTCTTCCACAAAAGTACCATTCGACGAGTACAAGGCGTTCGATTCTCCCTTCGGCATGTATCCCAACGATAACATTCCGGACTTCAGATTTGGTTCTCCATTTAACTTGGCATCAATTGATTATCCAGTAGACCCACCGTTGCCAAAGCAAGATACACAGTTGTGGTACCTTTGA 1836 46.9 MMNTMGIFEDIGFCRNLEYFSAPPGEQEIAREHEAEATLEEDYSDEELDVDELERRMWRDRMLLRRLKEQTKDKEGADNSKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAIPGKNDDCNTVTSTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGNEEWWPELGLPKDQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIVNQEEALARKMYPDKCPPVSICGSGSLLISDTSDYDVEGVEDEPNVETEESKPHDLNFFNMGASGLRERLMMPLVGPQIKEELMENNSDFIQKRKQMTDESNTMTTQKIYTCEYSQCPYNSSRLGFLDRTSRNNHQLNCPFRSDSSHIFGMPSFQTNDDKSSPVPPSFNHSKPPTRPMNPTPPFRVSGLGLPEDGQKMITDLLSFYDSNHQQDKNLNSGNVEARDDHNSQLPKFQLQVDDNLYCQGAMVGNNSMPMQHVDFSSTKVPFDEYKAFDSPFGMYPNDNIPDFRFGSPFNLASIDYPVDPPLPKQDTQLWYL 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8290917 8294709 + Tan0020763.1 Tan11g1054 767991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1054 611 MobiDBLite consensus disorder prediction 69 94 - -
Tan11g1054 611 Coils Coil 36 87 - -
Tan11g1054 611 Pfam Ethylene insensitive 3, DNA-binding domain 51 298 IPR047091 GO:0003700(InterPro)
Tan11g1054 611 FunFam Ethylene insensitive 3-like 1 83 161 - -
Tan11g1054 611 Coils Coil 373 393 - -
Tan11g1054 611 Gene3D - 83 163 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Tan11g1054 611 MobiDBLite consensus disorder prediction 460 474 - -
Tan11g1054 611 MobiDBLite consensus disorder prediction 443 459 - -
Tan11g1054 611 MobiDBLite consensus disorder prediction 443 474 - -
Tan11g1054 611 FunFam Ethylene insensitive 3-like 1 171 308 - -
Tan11g1054 611 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 7 607 IPR006957 GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(InterPro)
Tan11g1054 611 Gene3D - 175 308 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Tan11g1054 611 SUPERFAMILY DNA-binding domain of EIN3-like 177 301 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0870 Tan-Chr9:60008748 Tan11g1054 Tan-Chr11:8290917 9.50E-96 dispersed
Tan09g0871 Tan-Chr9:60008748 Tan11g1054 Tan-Chr11:8290917 9.50E-96 dispersed
Tan09g0930 Tan-Chr9:61316748 Tan11g1054 Tan-Chr11:8290917 9.90E-205 dispersed
Tan11g1054 Tan-Chr11:8290917 Tan11g1056 Tan-Chr11:8290917 0.00E+00 dispersed
Tan11g1054 Tan-Chr11:8290917 Tan11g1055 Tan-Chr11:8290917 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28699 PF04873 EIN3 2.90E-132 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1054 K14514 - csv:101214396 1100.12