Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1066 ATGCTCTTGAAGCCCTTCAACACCGTCGCCGTCGTCTTCATGCTCGCTTTCGCATTCTTCATCCTCTTCTTCACTGGCATCCTTGAATTTCCACCGGCGTCCACTTCCATCGTACCGCCTACCGACGATCTGAATCTCTCAGCAGTTGAGTCTGCATCTGAACCTTTCACTGACTTGATCACCGCCTTCAAGAAATGGGACTCTCAGGTCGGTTGTGATCGGTTCCGGGAGAAAATTGGCGGCGGTTTGGGCAATGGGTCTTCGTCTTCTTCGCTGCAGCAAGTCGGCGGCGATTCTAGTTCGGAATGTGGGGGGCTGAAATTGAATCACGTTGCTGTTTTGGTGAAAGGATGGACTTGGATTCCTGATAATTTAGACAATTTGTATTCGTGTTCTTGCGGATTGAGCTGTCTTTGGACTAAATCTTCTGTTCTTGCCGATAAACCTGACGCCTTGTTCTTCGAGACCAGTACGCCTCCACGGCAGAGGCGCAGGGGAGATCCTCTTCGCATATATATGGATCTCGAGGCTGGTCGGAAGCGCTCGGGTTTTGAGGATCTATTTGTTAGTTATCATGCAGAGGATGATGTTCAGTCAACTTATGCAGGAGCACTCTTTCACAATGGTCGAAACTATCATGTATCTTCTTCTAAAAACAATGACACACTTGTTTATTGGTCGTCGTCCCGTTGTCTTCCCCAAAGAAATCAGCTTGCTAAAAAGCTTCTAAGCTTGCTGCCTCACCATTCATTTGGCAAGTGCTTGAACAATGTAGGTGGACTCGACATGGCCCTTTCTATGTACCCTGAATGTGCAAATGATGCCAGTGTGACACCAAAATGGTGGGATCACTTGCATTGCGCAATGTCTCATTACAAATTTGTTCTCGCAATCGAAAACACGATGACCGAGAGTTACGTGACGGAGAAGCTATTTTACGCGCTAGACTCTGGTTCGGTTCCGATCTATTTTGGTGCCCCTAATGTCTGGGACTTTGTCCCTCCACATTCTATAATTGATGGGTCTAAATTCAGCTCCTTGGAAGAGTTAGCTTCTTTTGTAAAGCGACTCGCCGATGACCCGATAGCTTATGCTGAGTACCATGCTTGGAGACGATGCCGTGCATTGGGTAACTATAGAAGGACCCGGGCTGCAAGCCTCGACACGCTGCCGTGTCGGGTGTGTGATGCTGTGAGCAGAAAGGGTGGTAGAAATGCTTGA 1221 48.16 MLLKPFNTVAVVFMLAFAFFILFFTGILEFPPASTSIVPPTDDLNLSAVESASEPFTDLITAFKKWDSQVGCDRFREKIGGGLGNGSSSSSLQQVGGDSSSECGGLKLNHVAVLVKGWTWIPDNLDNLYSCSCGLSCLWTKSSVLADKPDALFFETSTPPRQRRRGDPLRIYMDLEAGRKRSGFEDLFVSYHAEDDVQSTYAGALFHNGRNYHVSSSKNNDTLVYWSSSRCLPQRNQLAKKLLSLLPHHSFGKCLNNVGGLDMALSMYPECANDASVTPKWWDHLHCAMSHYKFVLAIENTMTESYVTEKLFYALDSGSVPIYFGAPNVWDFVPPHSIIDGSKFSSLEELASFVKRLADDPIAYAEYHAWRRCRALGNYRRTRAASLDTLPCRVCDAVSRKGGRNA 406
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8362430 8366252 + Tan0004203.1 Tan11g1066 768003

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1066 406 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 109 400 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)|GO:0036065(PANTHER)|GO:0046920(PANTHER)
Tan11g1066 406 Gene3D - 171 379 IPR038577 -
Tan11g1066 406 PIRSF FucT_plant 1 406 IPR017177 -
Tan11g1066 406 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 99 400 - -
Tan11g1066 406 FunFam Alpha-(1,4)-fucosyltransferase 170 376 - -
Tan11g1066 406 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 220 401 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1066 K14412 - - csv:101216230 762.296
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Tan04g1055 . 100 566 Xyloglucan Fucosyltransferase1 AT1G14080 55.8 3.1e-154 542.7
Tan05g2424 . 111 581 Xyloglucan Fucosyltransferase1 AT1G14080 55.0 1.9e-151 533.5
Tan04g1055 . 81 568 Xyloglucan Fucosyltransferase1 AT1G14100 58.5 4.8e-165 578.6
Tan05g2424 . 113 581 Xyloglucan Fucosyltransferase1 AT1G14100 58.2 5.5e-161 565.1
Tan01g0973 . 45 546 Xyloglucan Fucosyltransferase1 AT1G14100 50.7 1.0e-146 517.7
Tan04g1055 . 81 569 Xyloglucan Fucosyltransferase1 AT1G14110 52.0 7.2e-139 491.5
Tan05g2424 . 113 583 Xyloglucan Fucosyltransferase1 AT1G14110 51.9 1.3e-132 470.7
Tan02g0914 . 1 513 Xyloglucan Fucosyltransferase1 AT1G49710 64.1 1.5e-190 663.3
Tan02g1711 . 1 514 Xyloglucan Fucosyltransferase1 AT1G49710 63.7 5.0e-186 648.3
Tan01g0697 . 1 514 Xyloglucan Fucosyltransferase1 AT1G49710 62.9 1.3e-183 640.2
Tan02g1712 . 1 430 Xyloglucan Fucosyltransferase1 AT1G49710 63.8 1.4e-151 533.9
Tan11g1066 . 7 406 Xyloglucan Fucosyltransferase1 AT1G71990 70.1 4.3e-169 591.7
Tan04g1055 . 6 567 Xyloglucan Fucosyltransferase1 AT2G03210 56.0 1.3e-182 637.1
Tan05g2424 . 8 582 Xyloglucan Fucosyltransferase1 AT2G03210 51.7 7.2e-170 594.7
Tan01g0973 . 52 544 Xyloglucan Fucosyltransferase1 AT2G03210 50.8 3.7e-142 502.7
Tan04g1055 . 36 565 Xyloglucan Fucosyltransferase1 AT2G03220 63.4 1.8e-197 686.4
Tan05g2424 . 58 579 Xyloglucan Fucosyltransferase1 AT2G03220 61.3 4.4e-188 655.2
Tan01g0973 . 56 543 Xyloglucan Fucosyltransferase1 AT2G03220 53.7 1.6e-153 540.4
Tan04g1055 . 101 566 Xyloglucan Fucosyltransferase1 AT2G15350 54.9 5.5e-153 538.5
Tan05g2424 . 99 582 Xyloglucan Fucosyltransferase1 AT2G15350 51.3 1.1e-145 514.2
Tan04g1055 . 101 567 Xyloglucan Fucosyltransferase1 AT2G15370 53.6 2.8e-147 519.6
Tan05g2424 . 104 582 Xyloglucan Fucosyltransferase1 AT2G15370 51.1 1.3e-141 500.7
Tan04g1055 . 92 567 Xyloglucan Fucosyltransferase1 AT2G15390 54.1 1.3e-149 527.3
Tan05g2424 . 113 581 Xyloglucan Fucosyltransferase1 AT2G15390 53.6 3.2e-143 506.1
Tan02g0914 . 1 513 Xyloglucan Fucosyltransferase1 AT3G19280 62.9 1.2e-187 653.7
Tan02g1711 . 1 514 Xyloglucan Fucosyltransferase1 AT3G19280 63.5 2.8e-186 649.0
Tan01g0697 . 1 514 Xyloglucan Fucosyltransferase1 AT3G19280 63.1 1.2e-184 643.7
Tan02g1712 . 1 430 Xyloglucan Fucosyltransferase1 AT3G19280 64.5 4.1e-153 538.9
Tan04g1055 . 6 567 Xyloglucan Fucosyltransferase1 AT2G03210 56.0 1.3e-182 637.1
Tan05g2424 . 8 582 Xyloglucan Fucosyltransferase1 AT2G03210 51.7 7.2e-170 594.7
Tan01g0973 . 52 544 Xyloglucan Fucosyltransferase1 AT2G03210 50.8 3.7e-142 502.7
Tan04g1055 . 36 565 Xyloglucan Fucosyltransferase1 AT2G03220 63.4 1.8e-197 686.4
Tan05g2424 . 58 579 Xyloglucan Fucosyltransferase1 AT2G03220 61.3 4.4e-188 655.2
Tan01g0973 . 56 543 Xyloglucan Fucosyltransferase1 AT2G03220 53.7 1.6e-153 540.4
Tan04g1055 . 6 567 Xyloglucan Fucosyltransferase1 AT2G03210 56.0 1.3e-182 637.1
Tan05g2424 . 8 582 Xyloglucan Fucosyltransferase1 AT2G03210 51.7 7.2e-170 594.7
Tan01g0973 . 52 544 Xyloglucan Fucosyltransferase1 AT2G03210 50.8 3.7e-142 502.7
Tan04g1055 . 92 567 Xyloglucan Fucosyltransferase1 AT2G15390 54.1 1.3e-149 527.3
Tan05g2424 . 113 581 Xyloglucan Fucosyltransferase1 AT2G15390 53.6 3.2e-143 506.1
Tan04g1055 . 101 567 Xyloglucan Fucosyltransferase1 AT2G15370 53.6 2.8e-147 519.6
Tan05g2424 . 104 582 Xyloglucan Fucosyltransferase1 AT2G15370 51.1 1.3e-141 500.7
Tan04g1055 . 100 566 Xyloglucan Fucosyltransferase1 AT1G14080 55.8 3.1e-154 542.7
Tan05g2424 . 111 581 Xyloglucan Fucosyltransferase1 AT1G14080 55.0 1.9e-151 533.5
Tan04g1055 . 81 568 Xyloglucan Fucosyltransferase1 AT1G14100 58.5 4.8e-165 578.6
Tan05g2424 . 113 581 Xyloglucan Fucosyltransferase1 AT1G14100 58.2 5.5e-161 565.1
Tan01g0973 . 45 546 Xyloglucan Fucosyltransferase1 AT1G14100 50.7 1.0e-146 517.7
Tan04g1055 . 81 569 Xyloglucan Fucosyltransferase1 AT1G14110 52.0 7.2e-139 491.5
Tan05g2424 . 113 583 Xyloglucan Fucosyltransferase1 AT1G14110 51.9 1.3e-132 470.7
Tan04g1055 . 101 566 Xyloglucan Fucosyltransferase1 AT2G15350 54.9 5.5e-153 538.5
Tan05g2424 . 99 582 Xyloglucan Fucosyltransferase1 AT2G15350 51.3 1.1e-145 514.2
Tan02g0914 . 1 513 Xyloglucan Fucosyltransferase1 AT3G19280 62.9 1.2e-187 653.7
Tan02g1711 . 1 514 Xyloglucan Fucosyltransferase1 AT3G19280 63.5 2.8e-186 649.0
Tan01g0697 . 1 514 Xyloglucan Fucosyltransferase1 AT3G19280 63.1 1.2e-184 643.7
Tan02g1712 . 1 430 Xyloglucan Fucosyltransferase1 AT3G19280 64.5 4.1e-153 538.9
Tan02g0914 . 1 513 Xyloglucan Fucosyltransferase1 AT1G49710 64.1 1.5e-190 663.3
Tan02g1711 . 1 514 Xyloglucan Fucosyltransferase1 AT1G49710 63.7 5.0e-186 648.3
Tan01g0697 . 1 514 Xyloglucan Fucosyltransferase1 AT1G49710 62.9 1.3e-183 640.2
Tan02g1712 . 1 430 Xyloglucan Fucosyltransferase1 AT1G49710 63.8 1.4e-151 533.9
Tan11g1066 . 7 406 Xyloglucan Fucosyltransferase1 AT1G71990 70.1 4.3e-169 591.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010578 1 1 1 1 1 1 2 1 1 0 0 1 2 1 1 2 1 2 2 1 1 1 1 1 1 0 1 1 1 1 32