Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g1129 | ATGGCATCATCCAAGCTCTTGGCATCTTCCAATTCGCGAAATTCGGATCTATCTCGAGGTTCTTCTTCTTCTTCCTCTTCTGCTTCTCTTTTAAATCCCCAATTTTTCTCCAATCGTTCCAGGAATAATGACAACCCAACTCGCAATCGAAGCCATAGTCTTAGCTCAATGACCGTCGATGGCTTTCTTCGTAATGGCAATCACAATACTTCCTCCGGCGCGCCCAAGACTGTGGATGATGTGTGGAGGGAGATTGTGTCTGGTGAGAGGAAGGAGTTGAAGGAGGAGGTTTCCGATGAGTTGATAACTCTTGAGGATTTTCTTGTGAAAACTGGAGCTGTGCCTGTGGAGGATGTCAAATTGCCGCAGACGGAGAGGCTGAGTGGAGGGATTTTTTCGTTTGATCCAATTCCGGCCAGCTCGTTTCAGGCATTGGATAAGGTCGAAGGATCCATTGTTGGATTTGGGAATGGGGTCGATTTGATTGGCAGTGGAGGAAGTGGGGGGAGAGGGAAAAGAGGCCGAGCTGCTTTGGAACCTTTGGATAAGGCGGCAGAGCAAAGACAGAGGAGGATGATCAAGAATAGGGAGTCTGCTGCAAGGTCTAGGGAAAGGAAGCAGGCTTATCAAGTGGAATTAGAGTCGTTAGCTGTAAGATTAGAGGAGGAGAACGAGCGGCTTTTGAGAGAAAAGGCTGAGAGGACCAAGGAAAGGTTTAAGCAGCTAATGGAAAAGGTGATTCCTGTGGTAGAAAAGCGACGACCCCCTCGAGTCATTCGGCGAGTGAATTCCATGAAATGGTGA | 804 | 48.13 | MASSKLLASSNSRNSDLSRGSSSSSSSASLLNPQFFSNRSRNNDNPTRNRSHSLSSMTVDGFLRNGNHNTSSGAPKTVDDVWREIVSGERKELKEEVSDELITLEDFLVKTGAVPVEDVKLPQTERLSGGIFSFDPIPASSFQALDKVEGSIVGFGNGVDLIGSGGSGGRGKRGRAALEPLDKAAEQRQRRMIKNRESAARSRERKQAYQVELESLAVRLEEENERLLREKAERTKERFKQLMEKVIPVVEKRRPPRVIRRVNSMKW | 267 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8945029 | 8949918 | - | Tan0017148.2 | Tan11g1129 | 768066 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g1129 | 267 | SMART | brlzneu | 183 | 245 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1129 | 267 | Coils | Coil | 206 | 245 | - | - | |
Tan11g1129 | 267 | CDD | bZIP_plant_BZIP46 | 187 | 214 | - | - | |
Tan11g1129 | 267 | SUPERFAMILY | Leucine zipper domain | 188 | 238 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1129 | 267 | Pfam | bZIP transcription factor | 185 | 245 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1129 | 267 | PANTHER | CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED | 42 | 241 | IPR043452 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro) | |
Tan11g1129 | 267 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 190 | 205 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1129 | 267 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 185 | 237 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1129 | 267 | Gene3D | - | 185 | 246 | - | - | |
Tan11g1129 | 267 | MobiDBLite | consensus disorder prediction | 1 | 76 | - | - | |
Tan11g1129 | 267 | FunFam | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | 185 | 244 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan11g1129 | Tan-Chr11:8945029 | Tan11g1131 | Tan-Chr11:8945029 | 1.40E-107 | dispersed | |
Tan11g1128 | Tan-Chr11:8945029 | Tan11g1129 | Tan-Chr11:8945029 | 2.30E-122 | tandem | |
Tan11g1129 | Tan-Chr11:8945029 | Tan11g1130 | Tan-Chr11:8945029 | 6.50E-113 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28709 | PF00170 | bZIP_1 | 7.40E-12 | CL0018 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g1129 | K14432 | - | csv:101223110 | 360.533 |