Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1129 ATGGCATCATCCAAGCTCTTGGCATCTTCCAATTCGCGAAATTCGGATCTATCTCGAGGTTCTTCTTCTTCTTCCTCTTCTGCTTCTCTTTTAAATCCCCAATTTTTCTCCAATCGTTCCAGGAATAATGACAACCCAACTCGCAATCGAAGCCATAGTCTTAGCTCAATGACCGTCGATGGCTTTCTTCGTAATGGCAATCACAATACTTCCTCCGGCGCGCCCAAGACTGTGGATGATGTGTGGAGGGAGATTGTGTCTGGTGAGAGGAAGGAGTTGAAGGAGGAGGTTTCCGATGAGTTGATAACTCTTGAGGATTTTCTTGTGAAAACTGGAGCTGTGCCTGTGGAGGATGTCAAATTGCCGCAGACGGAGAGGCTGAGTGGAGGGATTTTTTCGTTTGATCCAATTCCGGCCAGCTCGTTTCAGGCATTGGATAAGGTCGAAGGATCCATTGTTGGATTTGGGAATGGGGTCGATTTGATTGGCAGTGGAGGAAGTGGGGGGAGAGGGAAAAGAGGCCGAGCTGCTTTGGAACCTTTGGATAAGGCGGCAGAGCAAAGACAGAGGAGGATGATCAAGAATAGGGAGTCTGCTGCAAGGTCTAGGGAAAGGAAGCAGGCTTATCAAGTGGAATTAGAGTCGTTAGCTGTAAGATTAGAGGAGGAGAACGAGCGGCTTTTGAGAGAAAAGGCTGAGAGGACCAAGGAAAGGTTTAAGCAGCTAATGGAAAAGGTGATTCCTGTGGTAGAAAAGCGACGACCCCCTCGAGTCATTCGGCGAGTGAATTCCATGAAATGGTGA 804 48.13 MASSKLLASSNSRNSDLSRGSSSSSSSASLLNPQFFSNRSRNNDNPTRNRSHSLSSMTVDGFLRNGNHNTSSGAPKTVDDVWREIVSGERKELKEEVSDELITLEDFLVKTGAVPVEDVKLPQTERLSGGIFSFDPIPASSFQALDKVEGSIVGFGNGVDLIGSGGSGGRGKRGRAALEPLDKAAEQRQRRMIKNRESAARSRERKQAYQVELESLAVRLEEENERLLREKAERTKERFKQLMEKVIPVVEKRRPPRVIRRVNSMKW 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8945029 8949918 - Tan0017148.2 Tan11g1129 768066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1129 267 SMART brlzneu 183 245 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g1129 267 Coils Coil 206 245 - -
Tan11g1129 267 CDD bZIP_plant_BZIP46 187 214 - -
Tan11g1129 267 SUPERFAMILY Leucine zipper domain 188 238 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g1129 267 Pfam bZIP transcription factor 185 245 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g1129 267 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 42 241 IPR043452 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro)
Tan11g1129 267 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 190 205 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g1129 267 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 185 237 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g1129 267 Gene3D - 185 246 - -
Tan11g1129 267 MobiDBLite consensus disorder prediction 1 76 - -
Tan11g1129 267 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 185 244 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g1129 Tan-Chr11:8945029 Tan11g1131 Tan-Chr11:8945029 1.40E-107 dispersed
Tan11g1128 Tan-Chr11:8945029 Tan11g1129 Tan-Chr11:8945029 2.30E-122 tandem
Tan11g1129 Tan-Chr11:8945029 Tan11g1130 Tan-Chr11:8945029 6.50E-113 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28709 PF00170 bZIP_1 7.40E-12 CL0018 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1129 K14432 - csv:101223110 360.533