Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1146 ATGGAGCCCAACAAGTTAAACATAACTACTTTGGAGCAACAATCCGGGTTGGAGATTCAAACCAAGGAATTCGACTACTCGAAACGTGCACAATGGCTACGTGCCGCCGTGCTTGGCGCGAACGATGGGCTCGTCTCGACCGCGTCGCTTATGATGGGAGTTGGAGCTGTGAAACAAGACATCAAGGCCATGATCCTCACCGGCTTCGCCGGGTTGGTCGCCGGTGCGTGTAGTATGGCCATCGGCGAGTTCGTATCCGTTTACTCGCAGTTGGACATTGAAGTGGCTCAAATGAAAAGAGAAAAGTTACACAGAATTAATTTGGAAGGGCAAAGCCAAGAAAACAAAGATGAAGAGAAACTTCCTAATCCGCTCCAAGCCGCGGCGGCCTCCGCCTTGGCTTTCTCTCTAGGAGCAATGGTACCATTGTTGGCAGCTTCCTTTATAAGAGACTACAAGGTGAGGCTCGCGGTGGTTGTGGCCGCCGTGACGTTGGCTCTCGTTGTGTTCGGGTGGTTGGGCGCTATCCTTGGGAAAGCATCGCCGATCAAACCAGCCATCAGAGTTTTGGTCGGAGGTTGGCTAGCCATGGCTATAACCTTCGGATTAACAAAGCTAATCGGAGCAAGTGGACTCTAG 639 51.8 MEPNKLNITTLEQQSGLEIQTKEFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKREKLHRINLEGQSQENKDEEKLPNPLQAAAASALAFSLGAMVPLLAASFIRDYKVRLAVVVAAVTLALVVFGWLGAILGKASPIKPAIRVLVGGWLAMAITFGLTKLIGASGL 212
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9052411 9053480 - Tan0013504.1 Tan11g1146 768083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1146 212 Pfam VIT family 33 107 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Tan11g1146 212 Pfam VIT family 117 204 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Tan11g1146 212 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 9 208 IPR008217 GO:0005381(PANTHER)|GO:0005384(InterPro)|GO:0005384(PANTHER)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(InterPro)|GO:0030026(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3343 Tan-Chr1:91316980 Tan11g1146 Tan-Chr11:9052411 3.50E-75 dispersed
Tan02g1374 Tan-Chr2:46449382 Tan11g1146 Tan-Chr11:9052411 3.40E-61 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1146 K22736 - csv:116402413 343.969