Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1147 ATGATGGATTTGAACTTCACCGCCCGGAAGCCGCCGCATACGGCGGCGAGGATGGACATAGAACAGATGCCGGAGGCTCCACAGCGTGGCTATCACCACCGCCGTTCCCACTCCGATACCTCCTTCCGCTTCGCTAATTTCGACGATCTTCTCCTCTTCGATTCTCCCGACCTCGATTTGTCATCTTCCCTTCCTTCTCCCTCGCCCTCGCCGTCTCCGACGCTGGCGGGAGCTCGTACGACCCTCGATTCCTTCAATTCCAAGTCCCCTGAAGACGCCTCTGCCTCAAAACCTAGGGCTGGTAACGGTAACTCCGCTTCGTTCTTTGGCGCTCACTGCCGGAGCTTGTCGATGGATTCCGACTTCTTCGAGGGGTTGGGGATGGCCGGAGATGGCAGCGACGGTGAGGTACTAGGCGGGAGAGCGACGATCGGGGAGAAGAAGATGGGTCGCCATAGGCATAGCAATTCCATGGATGGCTCTTTGACATCCTCGTTTGAAGGTGAGTCCACCGTCGTAATTGATTGCTCGAAGAAAGCCATGGCGCCTGATAAACTCGCTGAGCTTGCTTTGATGGACCCTAAAAGAGCCAAGAGGATACTGGCGAATAGACAATCTGCTGCACGATCCAAAGAGAGGAAAATACGTTACACAAACGAATTGGAGAAGAAAGTGCAGATGCTTCAATCAGAAGCAACTTCCCTTTCTGCACAAGTCACAGTGTTACAGAGAGATACCACTGGATTGACTACTGAGAATAGAGAACTCAAGCTAAGGTTGCAGGCTATGGAACAGCAAGCCCAACTGAGGGATGCTCTAAATGAGACATTGAGGGAGGAAGTGCAGCGGCTTAAGATAGCTGCTGCCCAACTGACTGTTGCAAATGGTAACTCATTCAACATTGGGGGGCTACCCCCTCAGTTCCCTCCTCTCCACCCATCCTTGCTTCAGTTTACCAACAACGCTCAGAATCATCAACACCAACAGCAACAACTGCTTCACATGTCTCAGCCTGATGCTCGAGGAGGGTCTTCCCCGTCCCCGCTTCCCGGAGCTTAA 1059 53.07 MMDLNFTARKPPHTAARMDIEQMPEAPQRGYHHRRSHSDTSFRFANFDDLLLFDSPDLDLSSSLPSPSPSPSPTLAGARTTLDSFNSKSPEDASASKPRAGNGNSASFFGAHCRSLSMDSDFFEGLGMAGDGSDGEVLGGRATIGEKKMGRHRHSNSMDGSLTSSFEGESTVVIDCSKKAMAPDKLAELALMDPKRAKRILANRQSAARSKERKIRYTNELEKKVQMLQSEATSLSAQVTVLQRDTTGLTTENRELKLRLQAMEQQAQLRDALNETLREEVQRLKIAAAQLTVANGNSFNIGGLPPQFPPLHPSLLQFTNNAQNHQHQQQQLLHMSQPDARGGSSPSPLPGA 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9086250 9089343 + Tan0015405.1 Tan11g1147 768084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1147 352 SMART brlzneu 191 255 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g1147 352 FunFam Transcription factor VIP1 194 247 - -
Tan11g1147 352 MobiDBLite consensus disorder prediction 323 343 - -
Tan11g1147 352 MobiDBLite consensus disorder prediction 60 104 - -
Tan11g1147 352 Coils Coil 218 238 - -
Tan11g1147 352 Gene3D - 194 247 - -
Tan11g1147 352 MobiDBLite consensus disorder prediction 1 37 - -
Tan11g1147 352 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 19 334 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Tan11g1147 352 MobiDBLite consensus disorder prediction 73 104 - -
Tan11g1147 352 Coils Coil 246 294 - -
Tan11g1147 352 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 193 256 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g1147 352 Pfam bZIP transcription factor 195 251 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g1147 352 CDD bZIP_plant_RF2 196 245 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g1147 352 SUPERFAMILY Leucine zipper domain 195 247 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g1147 352 MobiDBLite consensus disorder prediction 323 352 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3345 Tan-Chr1:91842590 Tan11g1147 Tan-Chr11:9086250 4.40E-93 dispersed
Tan02g0740 Tan-Chr2:6960732 Tan11g1147 Tan-Chr11:9086250 1.80E-40 dispersed
Tan05g0544 Tan-Chr5:3833222 Tan11g1147 Tan-Chr11:9086250 1.10E-36 dispersed
Tan10g1202 Tan-Chr10:12104647 Tan11g1147 Tan-Chr11:9086250 3.10E-45 dispersed
Tan11g1147 Tan-Chr11:9086250 Tan11g1149 Tan-Chr11:9086250 9.10E-139 dispersed
Tan11g1147 Tan-Chr11:9086250 Tan11g1148 Tan-Chr11:9086250 8.20E-124 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28715 PF00170 bZIP_1 2.80E-07 CL0018 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1147 K20557 - csv:101215277 449.514