Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1149 ATGATGGATTTGAACTTCACCGCCCGGAAGCCGCCGCATACGGCGGCGAGGATGGACATAGAACAGATGCCGGAGGCTCCACAGCGTGGCTATCACCACCGCCGTTCCCACTCCGATACCTCCTTCCGCTTCGCTAATTTCGACGATCTTCTCCTCTTCGATTCTCCCGACCTCGATTTGTCATCTTCCCTTCCTTCTCCCTCGCCCTCGCCGTCTCCGACGCTGGCGGGAGCTCGTACGACCCTCGATTCCTTCAATTCCAAGTCCCCTGAAGACGCCTCTGCCTCAAAACCTAGGGCTGGTAACGGTAACTCCGCTTCGTTCTTTGGCGCTCACTGCCGGAGCTTGTCGATGGATTCCGACTTCTTCGAGGGGTTGGGGATGGCCGGAGATGGCAGCGACGGTGAGGTACTAGGCGGGAGAGCGACGATCGGGGAGAAGAAGATGGGTCGCCATAGGCATAGCAATTCCATGGATGGCTCTTTGACATCCTCGTTTGAAGGTGAGTCCACCGTCGTAATTGATTGCTCGAAGAAAGCCATGGCGCCTGATAAACTCGCTGAGCTTGCTTTGATGGACCCTAAAAGAGCCAAGAGGATACTGGCGAATAGACAATCTGCTGCACGATCCAAAGAGAGGAAAATACGTTACACAAACGAATTGGAGAAGAAAGTGCAGATGCTTCAATCAGAAGCAACTTCCCTTTCTGCACAAGTCACAGTGTTACAGAGAGATACCACTGGATTGACTACTGAGAATAGAGAACTCAAGCTAAGGTTGCAGGCTATGGAACAGCAAGCCCAACTGAGGGATGGTATGTGTGTTTCTTCTTCTTCTTCATTCATCATCTTACTATGGCTCATAGAAAAATGCTTACTTTTTTATTTTCTTTTTTTCTTTTTCCATTTTTCTCAAGGGTTTCAACCATAA 930 50.22 MMDLNFTARKPPHTAARMDIEQMPEAPQRGYHHRRSHSDTSFRFANFDDLLLFDSPDLDLSSSLPSPSPSPSPTLAGARTTLDSFNSKSPEDASASKPRAGNGNSASFFGAHCRSLSMDSDFFEGLGMAGDGSDGEVLGGRATIGEKKMGRHRHSNSMDGSLTSSFEGESTVVIDCSKKAMAPDKLAELALMDPKRAKRILANRQSAARSKERKIRYTNELEKKVQMLQSEATSLSAQVTVLQRDTTGLTTENRELKLRLQAMEQQAQLRDGMCVSSSSSFIILLWLIEKCLLFYFLFFFFHFSQGFQP 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9086250 9088000 + Tan0015405.3 Tan11g1149 768086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1149 309 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 19 273 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Tan11g1149 309 SMART brlzneu 191 255 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g1149 309 MobiDBLite consensus disorder prediction 60 104 - -
Tan11g1149 309 FunFam Transcription factor VIP1 194 247 - -
Tan11g1149 309 Coils Coil 218 238 - -
Tan11g1149 309 Coils Coil 246 266 - -
Tan11g1149 309 MobiDBLite consensus disorder prediction 1 37 - -
Tan11g1149 309 MobiDBLite consensus disorder prediction 73 104 - -
Tan11g1149 309 Pfam bZIP transcription factor 195 242 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g1149 309 SUPERFAMILY Leucine zipper domain 195 247 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g1149 309 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 193 256 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g1149 309 CDD bZIP_plant_RF2 196 245 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g1149 309 Gene3D - 194 247 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan10g1196 Tan-Chr10:12019986 Tan11g1149 Tan-Chr11:9086250 4.90E-38 dispersed
Tan11g1147 Tan-Chr11:9086250 Tan11g1149 Tan-Chr11:9086250 9.10E-139 dispersed
Tan11g1148 Tan-Chr11:9086250 Tan11g1149 Tan-Chr11:9086250 5.80E-124 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28717 PF00170 bZIP_1 4.90E-07 CL0018 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1149 K20557 - csv:101215277 340.502