Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g1149 | ATGATGGATTTGAACTTCACCGCCCGGAAGCCGCCGCATACGGCGGCGAGGATGGACATAGAACAGATGCCGGAGGCTCCACAGCGTGGCTATCACCACCGCCGTTCCCACTCCGATACCTCCTTCCGCTTCGCTAATTTCGACGATCTTCTCCTCTTCGATTCTCCCGACCTCGATTTGTCATCTTCCCTTCCTTCTCCCTCGCCCTCGCCGTCTCCGACGCTGGCGGGAGCTCGTACGACCCTCGATTCCTTCAATTCCAAGTCCCCTGAAGACGCCTCTGCCTCAAAACCTAGGGCTGGTAACGGTAACTCCGCTTCGTTCTTTGGCGCTCACTGCCGGAGCTTGTCGATGGATTCCGACTTCTTCGAGGGGTTGGGGATGGCCGGAGATGGCAGCGACGGTGAGGTACTAGGCGGGAGAGCGACGATCGGGGAGAAGAAGATGGGTCGCCATAGGCATAGCAATTCCATGGATGGCTCTTTGACATCCTCGTTTGAAGGTGAGTCCACCGTCGTAATTGATTGCTCGAAGAAAGCCATGGCGCCTGATAAACTCGCTGAGCTTGCTTTGATGGACCCTAAAAGAGCCAAGAGGATACTGGCGAATAGACAATCTGCTGCACGATCCAAAGAGAGGAAAATACGTTACACAAACGAATTGGAGAAGAAAGTGCAGATGCTTCAATCAGAAGCAACTTCCCTTTCTGCACAAGTCACAGTGTTACAGAGAGATACCACTGGATTGACTACTGAGAATAGAGAACTCAAGCTAAGGTTGCAGGCTATGGAACAGCAAGCCCAACTGAGGGATGGTATGTGTGTTTCTTCTTCTTCTTCATTCATCATCTTACTATGGCTCATAGAAAAATGCTTACTTTTTTATTTTCTTTTTTTCTTTTTCCATTTTTCTCAAGGGTTTCAACCATAA | 930 | 50.22 | MMDLNFTARKPPHTAARMDIEQMPEAPQRGYHHRRSHSDTSFRFANFDDLLLFDSPDLDLSSSLPSPSPSPSPTLAGARTTLDSFNSKSPEDASASKPRAGNGNSASFFGAHCRSLSMDSDFFEGLGMAGDGSDGEVLGGRATIGEKKMGRHRHSNSMDGSLTSSFEGESTVVIDCSKKAMAPDKLAELALMDPKRAKRILANRQSAARSKERKIRYTNELEKKVQMLQSEATSLSAQVTVLQRDTTGLTTENRELKLRLQAMEQQAQLRDGMCVSSSSSFIILLWLIEKCLLFYFLFFFFHFSQGFQP | 309 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9086250 | 9088000 | + | Tan0015405.3 | Tan11g1149 | 768086 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g1149 | 309 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 19 | 273 | - | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Tan11g1149 | 309 | SMART | brlzneu | 191 | 255 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1149 | 309 | MobiDBLite | consensus disorder prediction | 60 | 104 | - | - | |
Tan11g1149 | 309 | FunFam | Transcription factor VIP1 | 194 | 247 | - | - | |
Tan11g1149 | 309 | Coils | Coil | 218 | 238 | - | - | |
Tan11g1149 | 309 | Coils | Coil | 246 | 266 | - | - | |
Tan11g1149 | 309 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Tan11g1149 | 309 | MobiDBLite | consensus disorder prediction | 73 | 104 | - | - | |
Tan11g1149 | 309 | Pfam | bZIP transcription factor | 195 | 242 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1149 | 309 | SUPERFAMILY | Leucine zipper domain | 195 | 247 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1149 | 309 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 193 | 256 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1149 | 309 | CDD | bZIP_plant_RF2 | 196 | 245 | IPR044759 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g1149 | 309 | Gene3D | - | 194 | 247 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan10g1196 | Tan-Chr10:12019986 | Tan11g1149 | Tan-Chr11:9086250 | 4.90E-38 | dispersed | |
Tan11g1147 | Tan-Chr11:9086250 | Tan11g1149 | Tan-Chr11:9086250 | 9.10E-139 | dispersed | |
Tan11g1148 | Tan-Chr11:9086250 | Tan11g1149 | Tan-Chr11:9086250 | 5.80E-124 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28717 | PF00170 | bZIP_1 | 4.90E-07 | CL0018 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g1149 | K20557 | - | csv:101215277 | 340.502 |