Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1154 ATGACGAAATTGCCCTCCATCTTCAGTCCAAATACCCAACCACTCCATCTTCTTCCTCAAGATTCTATCAACAGTCAAAGATCCTCTCTACTGATCAATAAAATTCCCCAATCTACTTCTCAGCCTTTCTCCCTTACTTTCTCCTTCATTTTTTCCCTCTCTCGCTTTCATTCCCTATGGCCTTTCCTCGTCTCTGTTGATTCCATAGCGGATATGGATTTCGTTGAGGGCGTTGGAGAGAGTTCTTCGCCGCCTCGAAGCTTCGGTGCCTTCTGTGGCGTCCACGATGTTCGGAACGATGTTTATACTCGGTTGCTTGAGACTGGACATGAGGAGGCTGTTTCTAATCCCCAATTTCGCGAGAACTTGGATGCTCACTTCAATCGCTTGCCTCCGAGTTATGGACTTGATGTTAACATGGAGAAGGTGGAAGATGTTTTGTTACATCAAAATCTTCTTTCCCTAGCAAAGGATCCAGAGAAGTGCCCTGTTTACCATATTCGCTTTCTGGAGCATGTAAGTACTAAATCAGATGGCAATGATGATCACGAACTTGATAGTATTCTTTTAAGTGGTTCACCTAATGAAGCAGCTGATAGAAGATTTCCACTGTCGCACAAGAGAACTAGAGGCAATATAATTGACTTCGAGCCTTGTTCCAAACTTGAGGACTTAAATTTGGATGTTAGAAAGAACTCAAAGGCCATGGATGGGAGATATCATATGGAAATTTTTTCTAAAAGGCAGGGTATTTCACATGTTCCAATACACGAAGTGATATTTTCAACTGTTGACAAGCCAAAGCTTCTTAGCCAGCTTTCTGCTTTGCTTTCTGATATAGGACTTAACATTCGAGAAGCACATGTGTTTTCAACATCTGATGGTTACTCCTTGGATGTATTTGTGGTGGATGGATGGCCTATTGAGGAAACTGATGGCTTGTACGAAGCTATGGAAAAAGCAGTTGCTAGATATGAGGGGTCGTGGTCTGGTTCTTCACATTCTCATTCAGCAGTCAAGAAAGCATTAGACGCCCAGGCAAAGTTAGCAGATTGGGAAATAGATAGACGGTTGCTGAAGATAGGTGAAAGAATTGCATCTGGATCTTGTGGTGATTTGTATCATGGATTATATCTTGGCCAAGATGTAGCTGTCAAGATATTAAGAACTGAAGATCTAAATGATGATTTAGAGGATGAATTCAATCAAGAAGTGGCAATTCTCAGGAAGGTCCAGCATAAAAATGTAGTTCGTTTTATAGGTGCATGTACAAACTCTCCACATTTGTGTATTGTAACAGAGTATATGCCAGGAGGGAGTCTTTATGATTACCTGCACAAGAACCATAGTGTGTTAAAGCTCTCACAACTGCTGAAGTTTGCTATTGATGTTTGTGAAGGAATGGCATACTTACATTTAAATAACATTATCCACAGAGACTTGAAGACAGCAAATCTGCTAATGAACACTGAACATGTTGTAAAGGTGGCAGATTTTGGCGTTGCCCGATTCCAGAGCCAAGAAGGAGTAATGACAGCTGAAACTGGAACATACAGATGGATGGCGCCTGAGGTAATAAATCATCTGCCGTATGATCAGAAAGCAGATATTTTCAGTTTTGCGATTGTGCTGTGGGAACTAGTAACAGCAAAGGTTCCTTATGATTCCATGACACCGCTACAAGCTGCCCTAGGAGTAAGACAGGGACTACGTCCAGATCTTCCCAAAAACGTGCACCCGAAATTGTTGGATTTGATGCAAAGATGTTGGGATGCAGATCCTGTAAGTCGGCCTCCATTTACCGATATAAAAGCTGAACTTGAAAATCTCCTCGAAGAAGTTCAGGTAGCTTATTTATACCTTCCCACTTCGTCTTTACAACCTCATATGAATAATATGCAACCTTTCTAA 1911 41.55 MTKLPSIFSPNTQPLHLLPQDSINSQRSSLLINKIPQSTSQPFSLTFSFIFSLSRFHSLWPFLVSVDSIADMDFVEGVGESSSPPRSFGAFCGVHDVRNDVYTRLLETGHEEAVSNPQFRENLDAHFNRLPPSYGLDVNMEKVEDVLLHQNLLSLAKDPEKCPVYHIRFLEHVSTKSDGNDDHELDSILLSGSPNEAADRRFPLSHKRTRGNIIDFEPCSKLEDLNLDVRKNSKAMDGRYHMEIFSKRQGISHVPIHEVIFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTSDGYSLDVFVVDGWPIEETDGLYEAMEKAVARYEGSWSGSSHSHSAVKKALDAQAKLADWEIDRRLLKIGERIASGSCGDLYHGLYLGQDVAVKILRTEDLNDDLEDEFNQEVAILRKVQHKNVVRFIGACTNSPHLCIVTEYMPGGSLYDYLHKNHSVLKLSQLLKFAIDVCEGMAYLHLNNIIHRDLKTANLLMNTEHVVKVADFGVARFQSQEGVMTAETGTYRWMAPEVINHLPYDQKADIFSFAIVLWELVTAKVPYDSMTPLQAALGVRQGLRPDLPKNVHPKLLDLMQRCWDADPVSRPPFTDIKAELENLLEEVQVAYLYLPTSSLQPHMNNMQPF 636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9196209 9209941 + Tan0006477.2 Tan11g1154 768091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1154 636 Gene3D Phosphorylase Kinase; domain 1 346 436 - -
Tan11g1154 636 ProSiteProfiles ACT domain profile. 258 332 IPR002912 -
Tan11g1154 636 PRINTS Tyrosine kinase catalytic domain signature 516 526 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g1154 636 PRINTS Tyrosine kinase catalytic domain signature 578 600 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g1154 636 PRINTS Tyrosine kinase catalytic domain signature 535 557 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g1154 636 PRINTS Tyrosine kinase catalytic domain signature 433 446 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g1154 636 PRINTS Tyrosine kinase catalytic domain signature 470 488 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g1154 636 PANTHER SERINE-THREONINE PROTEIN KINASE 294 611 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Tan11g1154 636 Gene3D Transferase(Phosphotransferase) domain 1 437 628 - -
Tan11g1154 636 FunFam Serine/threonine-protein kinase isoform 1 350 437 - -
Tan11g1154 636 ProSiteProfiles Protein kinase domain profile. 359 611 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g1154 636 SUPERFAMILY Protein kinase-like (PK-like) 350 632 IPR011009 -
Tan11g1154 636 Pfam Protein tyrosine and serine/threonine kinase 359 607 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g1154 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g1154 636 SMART serkin_6 359 611 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g1154 636 SUPERFAMILY ACT-like 257 327 IPR045865 -
Tan11g1154 636 CDD STKc_MAP3K-like 365 607 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0553 Tan-Chr9:49097452 Tan11g1154 Tan-Chr11:9196209 1.00E-56 dispersed
Tan11g1154 Tan-Chr11:9196209 Tan03g2898 Tan-Chr3:82018236 9.20E-33 dispersed
Tan11g1153 Tan-Chr11:9196209 Tan11g1154 Tan-Chr11:9196209 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68201 PF07714 PK_Tyr_Ser-Thr 4.30E-72 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1154 - - - 0.0