Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1201 ATGGTAACATCGGGGCCACCCACTCCTATGGGTGGCGGTGCACAGTCTGTTTCACCCTCACTTCTGCGATCTAATTCTGGATTGCTGGGAGTTCAAGGTGGTCTGCTGCCTTCTCAGGCAGCCTTTTCTTCACTTGTATCGCCCCGCAATCAGTTCAATAATATGAATATGCTTGGTAATATGTCCAATGTGTCATCTCTCCTTAATCAATCATTTGGAAATGGGGCTCCTAATTCTGGACTTCCATGTCCTGGCAGTAGTCACCCTGGTGCAGAGCCAGACCCTCTTTCTGGTGTTGGCAATGGAATGAGCTTTAATAATCCTTCATCATCATTTGTAGCATCAAATATGACAAACCCCGTATCATCTGTCCAAGGGCAGAATCCACAATTTTCTAACCTTCCTAGCAGCCAGTTGTTATCAGATCAGCAGCAGTCACAACCACTTGAACCCCAGAACTTCCAACATAGTCAACAGTCGATGGAACAGTTTTCAGCACTTCAGAGCAATCAACAACCACAATTTCAAGCAATTCGAGGGTTGACTGGTGTTGGTACTGTAAAGTTGGAGCCTCAGGTGACCGGCAATGATCAACATGGACAGCAGCAGCAGCAGCAGCATTTGCAAACATTGAGAAATCTTGGTCCAGTGAAATTGGAATCACAACGACTTCAATCGCTGCGAGGTTTGGCACCAGTAAAAATGGAACCCCAACAATCAGACCAGTCATTATTTCTGCAGCAGCAGCAGCATCAACAGCATCAGCAGCATCAGCATCCGCATCAACAACAACAACCGCAACAGTTTCTCCATATGTCTAGACAGTCCTCTCAGGCAGCGGCTGCCCAAATCAATCTAATGCACCAACAAAGGCTTTTGCAGTTGCAACAACAACATCAGCAACAACATCTCTTAAAAAGTATGCCACCTCAACGGCCACAGTTGCAACAACATTTCCAACAGCAGAACCTTCCACTAAGATCTCCCGTAAAACCAGGATATGAACCTGGAATGTGTGCTAGGCGTCTGACTTTTTACATGTATCATCAGCAAAACAGACCTGAAGACAACAACATAGATTTCTGGAGGAAATTTGTTAACGAGTACTTTGCACCTCATGCCAAAAAGAAGTGGTGTGTTTCCATGTATGGAAGTGGGCGACAAACAACTGGAGTTTTCCCTCAGGATGTATGGCATTGTGAAATATGCAATCGTAAGCCTGGGCGTGGCTTTGAAGCAACTGCTGAAGTTCTTCCCAGGCTTTTTAAGATCAAGTATGAGAGTGGTACTATGGAGGAACTACTTTATCTTGACATGCCTCGTGAATATCATAATGCATCTGGTCAGATCGTCCTGGATTATGCCAAAGCAATACAGGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGCGATGGCCAACTTCGAATTGTTTTTTCTCCAGACCTTAAGATATGTTCATGGGAATTCTGTGCTCGACGCCATGAAGAACTTATTCCTAGGAGATTATTGATACCTCAGGTTAGTCACCTTGGGGCAGCAGCTCAAAAGTACCAGTCTGCCATTCAGAACGCATCATCCAATTTATCAACTCCTGAATTGCAAAATAATTGTAATATGTTTGTGGCTTCAGCGCGACAATTGGCTAAAGCCTTAGAAGTTCCGCTGGTAAATGACTTGGGATATACAAAGAGATATGTACGTTGTCTTCAGATATCCGAAGTGGTTAATAGCATGAAGGACTTGATTGATTACAGCAAAGAAACAGGGATTGGGCCAATGGATAGTTTAGCCAAGTTTCCTCGGAGGACTAGTTCATCATTGGGGCTTACAAATCAAACTCAAGTTTCTGATGAGCAGCAACAGCAGCAGCAGCAGCAACAACAACAACAACAGCAATCATCCTTAGCCCAGCACTCAAATAATAACCAGATTTCTGTCCAGGCTTCTGCAGTGCAGCTTTCAGCTAGCAATGGTGTGACCAATGTAAATAACAACGTCAACCAACCTTCAACATCAAACTCAGCAAGCACCATTGTTGGGCTTCTTCACCAGAATTCGATGAACTCCAGACAGCAGAACTCTATGTCTAATCCTAGCAACTCATATGGGGGAAGTTCTGTTCAGATTCCATCTCCTGGTTCATCCAGTACAATTCCACCTACACAACCGAACCCTTCTACATTCCAGCCACCAACTCCCTCATCATCTAACAATCTTTCACAACCATTGCATACAGCTGCAAAGAGTGCCAATCAGATGAGTGCTGCTAATTCTCCGGCAAATATCTCTATGCAACAACCCGCTTTATCTGGAGATGCTGATCCTAGTGATACACAGTCCTCCGTGCAAAAGATTTTACAAGAGATGATGATGAACAATCAAATGAATGGCCCGACAAGTCTGGTTGGTGTTGGTTCGGTGGTCAATGATATGAAAAATGTGAATGGTGTCTTACCTACAAGCAACACAGGTCTCAACAATGGGAATTGTACAGGGGGCAACGGAACAACCAACGGTGGCTCAGGCATGGGAGGAGGAGTATATGGATCAATGGGGAGTGGGCTTGGGCAGCCCACCTTGGTTAATGGGATGAGGAATGCAATGGGAAATAACTCCATTATGAACAGACGAATAGGAATGGCGTCGCTCGCTCTAGAGCAAAGCATGAACGGTCAACCGCAGGATTTGGGAAACCAGCTTCTAAGCGGACTAGGAGCTGTAAACGGCTTTAGTAATCTCCAATTTGACTGGAAGCCATCCCCATGA 2766 44.87 MVTSGPPTPMGGGAQSVSPSLLRSNSGLLGVQGGLLPSQAAFSSLVSPRNQFNNMNMLGNMSNVSSLLNQSFGNGAPNSGLPCPGSSHPGAEPDPLSGVGNGMSFNNPSSSFVASNMTNPVSSVQGQNPQFSNLPSSQLLSDQQQSQPLEPQNFQHSQQSMEQFSALQSNQQPQFQAIRGLTGVGTVKLEPQVTGNDQHGQQQQQQHLQTLRNLGPVKLESQRLQSLRGLAPVKMEPQQSDQSLFLQQQQHQQHQQHQHPHQQQQPQQFLHMSRQSSQAAAAQINLMHQQRLLQLQQQHQQQHLLKSMPPQRPQLQQHFQQQNLPLRSPVKPGYEPGMCARRLTFYMYHQQNRPEDNNIDFWRKFVNEYFAPHAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTMEELLYLDMPREYHNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSHLGAAAQKYQSAIQNASSNLSTPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSKETGIGPMDSLAKFPRRTSSSLGLTNQTQVSDEQQQQQQQQQQQQQQSSLAQHSNNNQISVQASAVQLSASNGVTNVNNNVNQPSTSNSASTIVGLLHQNSMNSRQQNSMSNPSNSYGGSSVQIPSPGSSSTIPPTQPNPSTFQPPTPSSSNNLSQPLHTAAKSANQMSAANSPANISMQQPALSGDADPSDTQSSVQKILQEMMMNNQMNGPTSLVGVGSVVNDMKNVNGVLPTSNTGLNNGNCTGGNGTTNGGSGMGGGVYGSMGSGLGQPTLVNGMRNAMGNNSIMNRRIGMASLALEQSMNGQPQDLGNQLLSGLGAVNGFSNLQFDWKPSP 921
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9954597 9962580 + Tan0021663.1 Tan11g1201 768138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1201 921 Pfam LIM-domain binding protein 342 596 IPR029005 -
Tan11g1201 921 MobiDBLite consensus disorder prediction 235 280 - -
Tan11g1201 921 MobiDBLite consensus disorder prediction 731 757 - -
Tan11g1201 921 MobiDBLite consensus disorder prediction 100 172 - -
Tan11g1201 921 MobiDBLite consensus disorder prediction 689 757 - -
Tan11g1201 921 MobiDBLite consensus disorder prediction 689 715 - -
Tan11g1201 921 MobiDBLite consensus disorder prediction 311 327 - -
Tan11g1201 921 MobiDBLite consensus disorder prediction 311 333 - -
Tan11g1201 921 MobiDBLite consensus disorder prediction 69 172 - -
Tan11g1201 921 MobiDBLite consensus disorder prediction 606 640 - -
Tan11g1201 921 MobiDBLite consensus disorder prediction 716 730 - -
Tan11g1201 921 MobiDBLite consensus disorder prediction 236 280 - -
Tan11g1201 921 PANTHER LIM DOMAIN-BINDING PROTEIN 1 912 IPR029005 GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0291 Tan-Chr7:5937509 Tan11g1201 Tan-Chr11:9954597 2.80E-93 dispersed
Tan11g1201 Tan-Chr11:9954597 Tan11g1202 Tan-Chr11:9954597 0.00E+00 tandem
Tan01g3309 Tan-Chr1:89716149 Tan11g1201 Tan-Chr11:9954597 4.00E-308 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1201 - - - 0.0