Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g1202 | ATGGTAACATCGGGGCCACCCACTCCTATGGGTGGCGGTGCACAGTCTGTTTCACCCTCACTTCTGCGATCTAATTCTGGATTGCTGGGAGTTCAAGGTGGTCTGCTGCCTTCTCAGGCAGCCTTTTCTTCACTTGTATCGCCCCGCAATCAGTTCAATAATATGAATATGCTTGGTAATATGTCCAATGTGTCATCTCTCCTTAATCAATCATTTGGAAATGGGGCTCCTAATTCTGGACTTCCATGTCCTGGCAGTAGTCACCCTGGTGCAGAGCCAGACCCTCTTTCTGGTGTTGGCAATGGAATGAGCTTTAATAATCCTTCATCATCATTTGTAGCATCAAATATGACAAACCCCGTATCATCTGTCCAAGGGCAGAATCCACAATTTTCTAACCTTCCTAGCAGCCAGTTGTTATCAGATCAGCAGCAGTCACAACCACTTGAACCCCAGAACTTCCAACATAGTCAACAGTCGATGGAACAGTTTTCAGCACTTCAGAGCAATCAACAACCACAATTTCAAGCAATTCGAGGGTTGACTGGTGTTGGTACTGTAAAGTTGGAGCCTCAGGTGACCGGCAATGATCAACATGGACAGCAGCAGCAGCAGCAGCATTTGCAAACATTGAGAAATCTTGGTCCAGTGAAATTGGAATCACAACGACTTCAATCGCTGCGAGGTTTGGCACCAGTAAAAATGGAACCCCAACAATCAGACCAGTCATTATTTCTGCAGCAGCAGCAGCATCAACAGCATCAGCAGCATCAGCATCCGCATCAACAACAACAACCGCAACAGTTTCTCCATATGTCTAGACAGTCCTCTCAGGCAGCGGCTGCCCAAATCAATCTAATGCACCAACAAAGGCTTTTGCAGTTGCAACAACAACATCAGCAACAACATCTCTTAAAAAGTATGCCACCTCAACGGCCACAGTTGCAACAACATTTCCAACAGCAGAACCTTCCACTAAGATCTCCCGTAAAACCAGGATATGAACCTGGAATGTGTGCTAGGCGTCTGACTTTTTACATGTATCATCAGCAAAACAGACCTGAAGACAACAACATAGATTTCTGGAGGAAATTTGTTAACGAGTACTTTGCACCTCATGCCAAAAAGAAGTGGTGTGTTTCCATGTATGGAAGTGGGCGACAAACAACTGGAGTTTTCCCTCAGGATGTATGGCATTGTGAAATATGCAATCGTAAGCCTGGGCGTGGCTTTGAAGCAACTGCTGAAGTTCTTCCCAGGCTTTTTAAGATCAAGTATGAGAGTGGTACTATGGAGGAACTACTTTATCTTGACATGCCTCGTGAATATCATAATGCATCTGGTCAGATCGTCCTGGATTATGCCAAAGCAATACAGGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGCGATGGCCAACTTCGAATTGTTTTTTCTCCAGACCTTAAGATATGTTCATGGGAATTCTGTGCTCGACGCCATGAAGAACTTATTCCTAGGAGATTATTGATACCTCAGGTTAGTCACCTTGGGGCAGCAGCTCAAAAGTACCAGTCTGCCATTCAGAACGCATCATCCAATTTATCAACTCCTGAATTGCAAAATAATTGTAATATGTTTGTGGCTTCAGCGCGACAATTGGCTAAAGCCTTAGAAGTTCCGCTGGTAAATGACTTGGGATATACAAAGAGATATGTACGTTGTCTTCAGATATCCGAAGTGGTTAATAGCATGAAGGACTTGATTGATTACAGCAAAGAAACAGGGATTGGGCCAATGGATAGTTTAGCCAAGTTTCCTCGGAGGACTAGTTCATCATTGGGGCTTACAAATCAAACTCAAGTTTCTGATGAGCAGCAACAGCAGCAGCAGCAGCAACAACAACAACAACAGCAATCATCCTTAGCCCAGCACTCAAATAATAACCAGATTTCTGTCCAGGCTTCTGCAGTGCAGCTTTCAGCTAGCAATGGTGTGACCAATGTAAATAACAACGTCAACCAACCTTCAACATCAAACTCAGCAAGCACCATTGTTGGGCTTCTTCACCAGAATTCGATGAACTCCAGACAGCAGAACTCTATGTCTAATCCTAGCAACTCATATGGGGGAAGTTCTGTTCAGATTCCATCTCCTGGTTCATCCAGTACAATTCCACCTACACAACCGAACCCTTCTACATTCCAGCCACCAACTCCCTCATCATCTAACAATCTTTCACAACCATTGCATACAGCTGCAAAGAGTGCCAATCAGATGAGTGCTGCTAATTCTCCGGCAAATATCTCTATGCAACAACCCGCTTTATCTGGAGATGCTGATCCTAGTGATACACAGTCCTCCGTGCAAAAGATTTTACAAGAGATGATGATGAACAATCAAATGAATGGCCCGACAAGTCTGGTTGGTGTTGGTTCGGTGGTCAATGATATGAAAAATGTGAATGGTGTCTTACCTACAAGCAACACAGGTCTCAACAATGGGAATTGTACAGGGGGCAACGGAACAACCAACGGTGGCTCAGGCATGGGAGGAGGAGTATATGGATCAATGGGGAGTGGGCTTGGGCAGCCCACCTTGGTTAATGGGATGAGGAATGCAATGGGAAATAACTCCATTATGAACAGACGAATAGGAATGGCGTCGCTCGCTCTAGAGCAAAGCATGAACGGTCAACCGCAGGATTTGGGAAACCAGCTTCTAAGCGGACTAGGAGCTGTAAACGGCTTTAGTAATCTCCAATTTGACTGGAAGCCATCCCCATGA | 2766 | 44.87 | MVTSGPPTPMGGGAQSVSPSLLRSNSGLLGVQGGLLPSQAAFSSLVSPRNQFNNMNMLGNMSNVSSLLNQSFGNGAPNSGLPCPGSSHPGAEPDPLSGVGNGMSFNNPSSSFVASNMTNPVSSVQGQNPQFSNLPSSQLLSDQQQSQPLEPQNFQHSQQSMEQFSALQSNQQPQFQAIRGLTGVGTVKLEPQVTGNDQHGQQQQQQHLQTLRNLGPVKLESQRLQSLRGLAPVKMEPQQSDQSLFLQQQQHQQHQQHQHPHQQQQPQQFLHMSRQSSQAAAAQINLMHQQRLLQLQQQHQQQHLLKSMPPQRPQLQQHFQQQNLPLRSPVKPGYEPGMCARRLTFYMYHQQNRPEDNNIDFWRKFVNEYFAPHAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTMEELLYLDMPREYHNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSHLGAAAQKYQSAIQNASSNLSTPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSKETGIGPMDSLAKFPRRTSSSLGLTNQTQVSDEQQQQQQQQQQQQQQSSLAQHSNNNQISVQASAVQLSASNGVTNVNNNVNQPSTSNSASTIVGLLHQNSMNSRQQNSMSNPSNSYGGSSVQIPSPGSSSTIPPTQPNPSTFQPPTPSSSNNLSQPLHTAAKSANQMSAANSPANISMQQPALSGDADPSDTQSSVQKILQEMMMNNQMNGPTSLVGVGSVVNDMKNVNGVLPTSNTGLNNGNCTGGNGTTNGGSGMGGGVYGSMGSGLGQPTLVNGMRNAMGNNSIMNRRIGMASLALEQSMNGQPQDLGNQLLSGLGAVNGFSNLQFDWKPSP | 921 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9954597 | 9962580 | + | Tan0021663.2 | Tan11g1202 | 768139 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g1202 | 921 | Pfam | LIM-domain binding protein | 342 | 596 | IPR029005 | - | |
Tan11g1202 | 921 | MobiDBLite | consensus disorder prediction | 235 | 280 | - | - | |
Tan11g1202 | 921 | MobiDBLite | consensus disorder prediction | 731 | 757 | - | - | |
Tan11g1202 | 921 | MobiDBLite | consensus disorder prediction | 100 | 172 | - | - | |
Tan11g1202 | 921 | MobiDBLite | consensus disorder prediction | 689 | 757 | - | - | |
Tan11g1202 | 921 | MobiDBLite | consensus disorder prediction | 689 | 715 | - | - | |
Tan11g1202 | 921 | MobiDBLite | consensus disorder prediction | 311 | 327 | - | - | |
Tan11g1202 | 921 | MobiDBLite | consensus disorder prediction | 311 | 333 | - | - | |
Tan11g1202 | 921 | MobiDBLite | consensus disorder prediction | 69 | 172 | - | - | |
Tan11g1202 | 921 | MobiDBLite | consensus disorder prediction | 606 | 640 | - | - | |
Tan11g1202 | 921 | MobiDBLite | consensus disorder prediction | 716 | 730 | - | - | |
Tan11g1202 | 921 | MobiDBLite | consensus disorder prediction | 236 | 280 | - | - | |
Tan11g1202 | 921 | PANTHER | LIM DOMAIN-BINDING PROTEIN | 1 | 912 | IPR029005 | GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g3309 | Tan-Chr1:89716149 | Tan11g1202 | Tan-Chr11:9954597 | 4.00E-308 | dispersed | |
Tan11g1201 | Tan-Chr11:9954597 | Tan11g1202 | Tan-Chr11:9954597 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g1202 | - | - | - | 0.0 |