Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1206 ATGTTCTCAAGGGATTCTAACGTTCTATTCAGTGGCGGCGGTATCAGTTTTCTCTATGGAAATCATACTGGAAAGTTCAGCTATGGCTATTCTAGTTTCAAGGGTAAAAGGGCTTCGATGGAGGACTTCTATGAAACTAGAATTTCTGAAGTTGATGGACAGATGGTTGCTTTTTTCGGTGTTTTTGATGGCCATGGAGGCTCCAGAACAGCTGAATACCTTAAGCACAATCTTTTCAAGAACCTAAGTAGCCATCCAGACTTTATCAAAGACACTAAGACAGCTATTACTGAGGTTTTTAGACAGACAGATGCCGATTATATTAATGAAGAGAGAGGACAGCAGAAAGATGCCGGGTCAACTGCATCAACTGCTGTATTGTTAGGGGATCGTCTCCTTGTTGCTAATGTTGGGGATTCCAGAGTAGTTGCGTCTAGAGCTGGTTCAGCTATTCCCCTCTCTATTGATCACAAGCCTGAGAGAACAGATGAACGGCAAAGGATTGAACAAGCTGGAGGTTTCATTATTTGGGCAGGAACTTGGAGAGTTGGTGGTATTCTAGCAGTTTCACGTTCCTTTGGAGATAAGCTACTCAAACAATATGTTGTTGCTGATCCCGAAATTAAGGAAGAAGAAATCGACAGTGTAGATTTTATTATTATTGCGAGCGATGGACTTTGGAATGTCATATCAAATGAGGAAGCTGTAACATTAGTGCAACACATCCAAGATGCAGAAATGGCGTCTAGAAAACTTATCCAAGAAGCTTATGCACGAGGGAGTTCCGACAACATTACATGCGTCATCGTCTCGACGGAAATGGTGAACGACACTGAGTATTACGACATTCTCGGCGTTCGTCCTTCTGCTTCCGAGGAGGAGATTCGTAAGGCCTATTATCATAAGGCGAAACAAGTTCATCCGGATAAGAATTTGAATGATCCTCAAGCTGCTGAAAGGTTTCAGGTACTAGGTGAAGCTTATCAAGTTTTGAGTGATGCAGTCCAAAGAGAAGCATATGATAGGAATGGGAAGCACAGTGTTACTAGGGAATCCATGCTTGACCCTACTGCTGTTTTTGCACTTCTATTTGGAAGTGAATTATTTGAGGACTACATTGGACATTTAGCTGTAGCATCAATGGCGTCGTCTGAATTAGAGAGCGAAGCTGGTAATCCAGAGAGATTACATGATAAGTTGAAGGCTGTCCAGAAAGAAAGAGAAGAAAAACTTGCACGTGTGCTGGAGGGTTTTCTTAATCAATATGTTCATGGTGACAAAGAAGGATTCTTACGGCATGCTGAATCTGAAGCCAAAAGACTTTCTAATGCAGCTTTTGGTGTTAGTATATTACACACTATAGGCTACATTTATTCAAGACAAGCAGCACAAGAGCTTGGAAAGAAAGCCATTTATCTTGGCGTGCCATTTGTGGCTGAATGGTTTCGCAACAAGGGACATTTTTGGAAGTCACAGATAACAGCTGCAAAAGGTGCATTTCAGTTGTTACAACTTCAAGATGATATTTCTCGGCAGTTTAAAATGGATGGTAGTGGCCCTGGAAATGATATTGAATCGCATATTCGAGCGAATAAAGACACATTCCTGAATTCTTTGTGGAAGCTTAACGTAGTGGACATTGAACTGACTCTTATAAATGTGTGCCAGATGGTGCTACGGGATAATACTGTTAAAAAGGAAGAACTAAAAGCTCGTGCTCTGGCTCTGAAGATTCTTGGAAAGATATTCCAGCAGGAGAAGCATGGACAAAATGGAGGAACGTCAAGAAAGAAAAGTGCTGCTGCAGTAGATGACGATGGAACAAGTTCAGACAGCAGCGATGATGAGGATCCCCAAAGACCACTATCATATCGAACTCCTTTTCTTACTCAGGGTATAGGTAGACTCTTCAGATGTCTCTGTAACCCAGCATTTGATGTGGACGATGAAGAAATTGTGTATAAAAGCAAATGA 1974 41.64 MFSRDSNVLFSGGGISFLYGNHTGKFSYGYSSFKGKRASMEDFYETRISEVDGQMVAFFGVFDGHGGSRTAEYLKHNLFKNLSSHPDFIKDTKTAITEVFRQTDADYINEERGQQKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPERTDERQRIEQAGGFIIWAGTWRVGGILAVSRSFGDKLLKQYVVADPEIKEEEIDSVDFIIIASDGLWNVISNEEAVTLVQHIQDAEMASRKLIQEAYARGSSDNITCVIVSTEMVNDTEYYDILGVRPSASEEEIRKAYYHKAKQVHPDKNLNDPQAAERFQVLGEAYQVLSDAVQREAYDRNGKHSVTRESMLDPTAVFALLFGSELFEDYIGHLAVASMASSELESEAGNPERLHDKLKAVQKEREEKLARVLEGFLNQYVHGDKEGFLRHAESEAKRLSNAAFGVSILHTIGYIYSRQAAQELGKKAIYLGVPFVAEWFRNKGHFWKSQITAAKGAFQLLQLQDDISRQFKMDGSGPGNDIESHIRANKDTFLNSLWKLNVVDIELTLINVCQMVLRDNTVKKEELKARALALKILGKIFQQEKHGQNGGTSRKKSAAAVDDDGTSSDSSDDEDPQRPLSYRTPFLTQGIGRLFRCLCNPAFDVDDEEIVYKSK 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9994268 10003945 + Tan0005094.1 Tan11g1206 768143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1206 657 ProSitePatterns PPM-type phosphatase domain signature. 58 66 IPR000222 GO:0043169(InterPro)
Tan11g1206 657 SMART PP2C_4 17 270 IPR001932 -
Tan11g1206 657 CDD DnaJ 279 333 IPR001623 -
Tan11g1206 657 Gene3D - 20 272 IPR036457 -
Tan11g1206 657 CDD PP2Cc 26 270 IPR001932 -
Tan11g1206 657 SUPERFAMILY PP2C-like 23 270 IPR036457 -
Tan11g1206 657 Pfam X-domain of DnaJ-containing 404 593 IPR026894 -
Tan11g1206 657 Gene3D DnaJ domain 273 359 IPR036869 -
Tan11g1206 657 Pfam DnaJ domain 279 341 IPR001623 -
Tan11g1206 657 FunFam probable protein phosphatase 2C 59 20 276 - -
Tan11g1206 657 ProSiteProfiles PPM-type phosphatase domain profile. 27 272 IPR001932 -
Tan11g1206 657 ProSiteProfiles dnaJ domain profile. 279 344 IPR001623 -
Tan11g1206 657 Pfam Protein phosphatase 2C 28 265 IPR001932 -
Tan11g1206 657 MobiDBLite consensus disorder prediction 587 625 - -
Tan11g1206 657 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 239 616 IPR052423 -
Tan11g1206 657 SMART dnaj_3 278 336 IPR001623 -
Tan11g1206 657 ProSitePatterns Nt-dnaJ domain signature. 321 340 IPR018253 -
Tan11g1206 657 PRINTS DnaJ domain signature 281 299 IPR001623 -
Tan11g1206 657 PRINTS DnaJ domain signature 316 336 IPR001623 -
Tan11g1206 657 PRINTS DnaJ domain signature 299 314 IPR001623 -
Tan11g1206 657 PRINTS DnaJ domain signature 336 355 IPR001623 -
Tan11g1206 657 SUPERFAMILY Chaperone J-domain 274 374 IPR036869 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0076 Tan-Chr1:831839 Tan11g1206 Tan-Chr11:9994268 1.90E-25 dispersed
Tan01g0077 Tan-Chr1:831839 Tan11g1206 Tan-Chr11:9994268 1.90E-25 dispersed
Tan01g3523 Tan-Chr1:100383347 Tan11g1206 Tan-Chr11:9994268 5.80E-99 dispersed
Tan01g5198 Tan-Chr1:117058075 Tan11g1206 Tan-Chr11:9994268 3.40E-36 dispersed
Tan02g0200 Tan-Chr2:1718196 Tan11g1206 Tan-Chr11:9994268 6.60E-47 dispersed
Tan03g2792 Tan-Chr3:80906878 Tan11g1206 Tan-Chr11:9994268 2.40E-38 dispersed
Tan04g1322 Tan-Chr4:13953942 Tan11g1206 Tan-Chr11:9994268 8.80E-39 dispersed
Tan05g1275 Tan-Chr5:13986568 Tan11g1206 Tan-Chr11:9994268 1.90E-81 dispersed
Tan05g1276 Tan-Chr5:13986568 Tan11g1206 Tan-Chr11:9994268 1.90E-81 dispersed
Tan08g1277 Tan-Chr8:42487673 Tan11g1206 Tan-Chr11:9994268 6.40E-38 dispersed
Tan08g1278 Tan-Chr8:42487673 Tan11g1206 Tan-Chr11:9994268 6.20E-38 dispersed
Tan11g0034 Tan-Chr11:639107 Tan11g1206 Tan-Chr11:9994268 4.90E-40 dispersed
Tan11g0210 Tan-Chr11:1765307 Tan11g1206 Tan-Chr11:9994268 4.70E-32 dispersed
Tan11g1206 Tan-Chr11:9994268 Tan01g4380 Tan-Chr1:108802212 6.20E-48 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1206 - - - 0.0