Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1218 ATGGGGCGTCCAATTGAGACGCTTATTCTACTCATAATACTAAACATAGCCATCTTATCGGCGGCGTATGTAGCAACGGCGACGACGGCGGCGAATGCATCGACGGTAGTAGGCTCTCAGGCCTTACCCGGGTGCGACGAATGGTGCGGCGACTTGCAGATTCCCTATCCATTCGGCACAAGGGAAGGGTGTTATCTGAATAGAAATTTCTTCATCGAATGTAACACAAGTCATTATGATTCTCCAAAGGCATTTCTAGGGGGTGGCAACCTTAACGTTACAAATATATTAATCTCCGGGGAGATTCAGATATTGCACTTCGTCGCCCAAGATTGCTACCCGAAAACCAACAGTTCCGATGATTCATCCTCCATCTATCTCGATGTACCGGCGTACACTGTTTCTACCAAGAACAAGTTCACCGTCATCGGCTGTGATACTTACGCTTATATTTATGGCGACATCGAAGGGCAAAGCTTCAGAACTGCATGCGTAGCATTGTGTGATGATATTACCAACGTAAGAGATGGGCGCTGCTCTGGCAATGGGTGTTGTCAGTTGGAGATTCCCAATGGCTTAGATTATTTGAGATACGAAGTGAGCAGCTTCAACAATCACATTAATGTCTCGACCTTCAATCCATGTGGGTATGCCTTTGTAATTCAAGAAGACGAGTTTAATTTCTCGTCAACGTATGTTCGCAATTTTCCCCATAACAGAATTCCGTCGGTGCTTGATTGGGCCATTAGTAACAGTACTTGCTTGACGGCTCACAACAAAACTAATTGTATTTGTGGCCCAAATAGCAGCAAGGTTAACTTTCTTCATGATGGATCTGAATATCGTTGTCACTGCTTCGAAGGCTTTGAGGGGAATCCATATCTCCCTCAAGGTTGTCAAGATATAGATGAGTGCAAGGATGAAAGGCTGAATGACTGCAAGTATGAGTGTGTTAACACAGTAGGAAACTATACTTGCAATTGTCCTGAGGAGTTTAAAGGAGATGGAAGACATGGGGGAGAAGGTTGTACCAAAAACTCCAAGTCTTTCGTTCAAATCATCGTAGGAGTTTGTGTGGGGTTCACAGTATTAGTGATTGGAAGTACATGGTTATACTTGGGCTACAGAAAATGGAAGTATATTAAACTGAAAGAGAAGTTCTTTGAGAACAATGGAGGCTTGATGCTTCAACAACATCTTTCTCAATGGCAATTATCTAGGGACATGGTCAGAATTTTCACCCAAGAGGAGCTGGAGAAGGCTACAAACAAGTACGACGAAAATGCAGTGGTTGGAAAAGGTGGCTATGGCACTGTTTACAAAGGAGTCTTAGACGACGGTCTGGTAGTTGCAATTAAGAAATCAAAATTAGCAGACCAATCCCAAACTTCCCAATTCATTAACGAAGTCATTGTTTTGTCCCAAATCAACCACCGTAATGTGGTCAGACTCTTAGGGTGTTGTTTAGAGACACAAGTTCCATTGTTGGTGTACGAGTTCATCACTAATAGTACACTTTACGACCATATCCATGAAAAAACCAATCACGATTATTCTCTCTCATGGGAAGCTCGCTTGAGAATAGCTTCAGAAACAGCAGGGGTCATTTCATATTTGCATTCTTCAGCTTCCACTCCAATTATCCACAGAGATATCAAGACAACTAACATACTTTTAGACAATAATTACACTGCAAAGGTGTCTGATTTCGGTGCTTCAAAGTTGGTTCCAGTGGATCAAACTCAATTATCCACAATGGTGCAAGGGACTCTTGGATATTTAGACCCAGAGTACTTGTTAACGAGTGAGTTGACAGAGAAAAGCGACGTGTATAGCTTTGGAATTGTGCTGCTAGAGCTTATAACTGGGAAGAAGGCAGTGAGTTTTGAGGGGCCAGAAGCAGAGAGGAATCTAGCCATGTACGTCCTGAGTGCAATGAAAGAAGATCGTTTGGTAGAAGTTGTGGAAAAGGGAATGGCAACGGAAGCAAACTTTGAACAGATAAAAGGAGTGGCTAAGTTAGCAAGAAAGTGTTTGAGAATAAGTGGGGAGGACCGACCGAGCATGAAGGAGGTGGGTATGGAGTTGGAAGGACTGAGAGTGATGATTGAGGATCATTGGGTTAATGACAAGCACTCACCGAACACAGGAGAGATAGTGGCTTATTTGCTGCAGGATGGAGCTTCAGAATCCACATCCAACCAGTTTTTTATGAGTGGGAGAACAAATGTTGTGGACGATAGCATGAAGCAAAAAGATAGTTTTTATTATTGCAATCCCAGAGGTCAAACCCCATTGTACAAAAACCTCATTTTAAATATGGGACGTCCCGCGGAGAAGCTTGTTCGGGTGATGATGATTTTTTTAGCATCTTTAGCGGCAGCGGCGGCACCAGACTGCGACCGACAGTGTGGGAACTTGGAAATTCCATATCCGTTTGGGATGAAGGAAGGGTGTTATCTGAATAAAAATTTCTCTATTAGCTGCAACAAAAGTCATGATCCTCCAAAGGCAATTCTAGGAGGAAGAATTGAAGTAATCAATATATCTATCGTTCGCAGTGAGCTCCAAATCTTGCAGTCTGTAGCCCGAGATTGCTACATGAAAAATGGTTCCAATTTCTACAACAATTACACTATCAAAATTCCCATGTTCACCATTTCCCACACGAAAAACAAGTTCGCGGTCATCGGGTGTGATACTTACGCTTTTATTTCGGGCCAACTCCAAGGGGAATTCTATCAAAGTGGGTGCATGACGTTGTGTGGAAACAGTACAAGAACTATAAGCGATGGATCTTGCTCTGGCAATGGGTGCTGTCAGGTGGAGATTCCCAAAGGCCTAAAAGATTTGGTGTTGGATGTGAGTAGCTTTAGAGGTCACTCAAACGTACTCAACTTCAATCCCTGTGGGTATGCTTTTGTAATTCAACAGGACAACTTTACTTTCTCTTCCTCATATCTTCGCAATTTTACAAAAGACAAAGTTCCTCTGGTGCTTGATTGGGCCATCCCAACCCAAACTTGCTCAACCCTTAACAACAAAACCAATTGCATATGTGGACCAAACAGTAAAAAGATTAACTTCCTCAATGATACATCTCAATATCATTGTCGGTGCTTGGAAGGTTTTCAGGGGAATCCATATCTCTCTAAAGGTTGTCAAGACATAGATGAATGCCAGAATGGAAGCCATGAATGCAAATTCAAAGATCAGTGTGTTAACACGCCAGGAAACTATACCTGCAATTGTCCTAAGAACTATAAAGGAGATAGCAGACGTGGGGGAGAAGGTTGCACCCAAAACTCCACGCCTTTTATTCTTATAATCGTTGGAATTGGCGTGGGTCTCACAATTTTAGTGATTGGCAGTACATGGTTATACTTGGGTTACAAAAAGTGGAAGTTTATCCAACGAAAAGAGAAGTTTTTTGAGAAAAATGGAGGGTTGATGCTTCAACAACATCTCTCCAAGTGGCAATCACCCGCCGACATGCTCAAAATTTTCACTCAAGAAGAGCTGGAGAAGGCCACAGACAAGTTTAATGATAGTGTTGTGGTTGGAAAAGGCGGCTATGGCACCGTTTACAAGGGAGTCTTAGACGACGGTCTAACAATCGCAATCAAGAAATCAAAATTTGTGAACAAATCTCAAACTTCCCAATTCATTAATGAAGTCATCATTCTGTCTCAAATCAATCATCGAAATGTGGTGAGGCTTTTAGGGTGCTGTTTGGAGACACAAGTTCCATTGTTGGTGTATGAGTTTATTTCCGGTGGAACGCTCTTCGAACACATTCATGACAAAACCAAGCATGCTTCTTCTTATGTTTCATGGGAAGCTCGTCTGAAAATAGCTTCAGAAACTGCTGGTGTGCTCTCCTATTTGCATTCTTCAGCTTCTACTCCCATTATACATAGAGATATCAAGTCCTCTAATATACTTTTAGACCATAATTACACAGTTAAACTCTCTGATTTTGGAGCTTCAAAATTGGTTCCGTTGGATCATACTCAAATATCCACAATGGTGCAAGGGACTCTTGGATATTTGGATCCAGAATACTTGCTGACAAGTGAGTTAACGGAAAAAAGCGATGTGTATAGTTTCGGAATTGTGCTTTTTGAGCTTATAACTGGGAAGAAAGCGGTGCGTTTTGATGGGCCGGAAGAAGAGAGAAATCTAGCTATGTACGTATTGAGTGCAATGAAAGAAGATCGTTTGGAAGATGTTGTGGAGGAGGGAATGGCAACCGAAGAGATCACCTTGGGGCAGATAAAAGAAGCGGCAAAGTTAGCAAAAGAGTGTGTAAGAGTAAAAGGGGAGGATCGACCCACCATGAGGGAGGTTGCTATCCAGTTGGAAGGGTTGCAACCGATGAAGCAAGTTGAGCATTGCAATTCGTTGATTGGAAATTCAGACTCAAGTCCATTTGTTGTTAGTGACACTATGGATAGCATAAATCCTCACATTTTGTCACATATCAATCATGGAAGATGA 4500 42.27 MGRPIETLILLIILNIAILSAAYVATATTAANASTVVGSQALPGCDEWCGDLQIPYPFGTREGCYLNRNFFIECNTSHYDSPKAFLGGGNLNVTNILISGEIQILHFVAQDCYPKTNSSDDSSSIYLDVPAYTVSTKNKFTVIGCDTYAYIYGDIEGQSFRTACVALCDDITNVRDGRCSGNGCCQLEIPNGLDYLRYEVSSFNNHINVSTFNPCGYAFVIQEDEFNFSSTYVRNFPHNRIPSVLDWAISNSTCLTAHNKTNCICGPNSSKVNFLHDGSEYRCHCFEGFEGNPYLPQGCQDIDECKDERLNDCKYECVNTVGNYTCNCPEEFKGDGRHGGEGCTKNSKSFVQIIVGVCVGFTVLVIGSTWLYLGYRKWKYIKLKEKFFENNGGLMLQQHLSQWQLSRDMVRIFTQEELEKATNKYDENAVVGKGGYGTVYKGVLDDGLVVAIKKSKLADQSQTSQFINEVIVLSQINHRNVVRLLGCCLETQVPLLVYEFITNSTLYDHIHEKTNHDYSLSWEARLRIASETAGVISYLHSSASTPIIHRDIKTTNILLDNNYTAKVSDFGASKLVPVDQTQLSTMVQGTLGYLDPEYLLTSELTEKSDVYSFGIVLLELITGKKAVSFEGPEAERNLAMYVLSAMKEDRLVEVVEKGMATEANFEQIKGVAKLARKCLRISGEDRPSMKEVGMELEGLRVMIEDHWVNDKHSPNTGEIVAYLLQDGASESTSNQFFMSGRTNVVDDSMKQKDSFYYCNPRGQTPLYKNLILNMGRPAEKLVRVMMIFLASLAAAAAPDCDRQCGNLEIPYPFGMKEGCYLNKNFSISCNKSHDPPKAILGGRIEVINISIVRSELQILQSVARDCYMKNGSNFYNNYTIKIPMFTISHTKNKFAVIGCDTYAFISGQLQGEFYQSGCMTLCGNSTRTISDGSCSGNGCCQVEIPKGLKDLVLDVSSFRGHSNVLNFNPCGYAFVIQQDNFTFSSSYLRNFTKDKVPLVLDWAIPTQTCSTLNNKTNCICGPNSKKINFLNDTSQYHCRCLEGFQGNPYLSKGCQDIDECQNGSHECKFKDQCVNTPGNYTCNCPKNYKGDSRRGGEGCTQNSTPFILIIVGIGVGLTILVIGSTWLYLGYKKWKFIQRKEKFFEKNGGLMLQQHLSKWQSPADMLKIFTQEELEKATDKFNDSVVVGKGGYGTVYKGVLDDGLTIAIKKSKFVNKSQTSQFINEVIILSQINHRNVVRLLGCCLETQVPLLVYEFISGGTLFEHIHDKTKHASSYVSWEARLKIASETAGVLSYLHSSASTPIIHRDIKSSNILLDHNYTVKLSDFGASKLVPLDHTQISTMVQGTLGYLDPEYLLTSELTEKSDVYSFGIVLFELITGKKAVRFDGPEEERNLAMYVLSAMKEDRLEDVVEEGMATEEITLGQIKEAAKLAKECVRVKGEDRPTMREVAIQLEGLQPMKQVEHCNSLIGNSDSSPFVVSDTMDSINPHILSHINHGR 1499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10164484 10191725 - Tan0004812.1 Tan11g1218 768155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1218 1499 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 317 328 IPR000152 -
Tan11g1218 1499 ProSiteProfiles EGF-like domain profile. 1056 1094 IPR000742 -
Tan11g1218 1499 SMART serkin_6 425 703 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g1218 1499 SMART serkin_6 1181 1461 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g1218 1499 FunFam Wall-associated receptor kinase 2 1151 1256 - -
Tan11g1218 1499 ProSitePatterns Calcium-binding EGF-like domain signature. 1056 1082 IPR018097 GO:0005509(InterPro)
Tan11g1218 1499 ProSitePatterns Calcium-binding EGF-like domain signature. 301 326 IPR018097 GO:0005509(InterPro)
Tan11g1218 1499 SUPERFAMILY Protein kinase-like (PK-like) 404 696 IPR011009 -
Tan11g1218 1499 FunFam Wall-associated receptor kinase 2 501 718 - -
Tan11g1218 1499 FunFam Wall-associated receptor kinase 2 1257 1475 - -
Tan11g1218 1499 FunFam Wall-associated receptor kinase 2 395 500 - -
Tan11g1218 1499 SUPERFAMILY EGF/Laminin 1055 1091 - -
Tan11g1218 1499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1304 1316 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g1218 1499 CDD STKc_IRAK 1187 1457 - -
Tan11g1218 1499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 547 559 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g1218 1499 ProSitePatterns Protein kinases ATP-binding region signature. 1187 1210 IPR017441 GO:0005524(InterPro)
Tan11g1218 1499 Pfam Protein tyrosine and serine/threonine kinase 429 694 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g1218 1499 CDD EGF_CA 1056 1092 - -
Tan11g1218 1499 SUPERFAMILY EGF/Laminin 300 336 - -
Tan11g1218 1499 Gene3D Plasmodium vivax P25 domain 244 350 - -
Tan11g1218 1499 SMART egfca_6 301 344 IPR001881 GO:0005509(InterPro)
Tan11g1218 1499 SMART egfca_6 1056 1100 IPR001881 GO:0005509(InterPro)
Tan11g1218 1499 ProSitePatterns Protein kinases ATP-binding region signature. 431 454 IPR017441 GO:0005524(InterPro)
Tan11g1218 1499 ProSiteProfiles EGF-like domain profile. 301 338 IPR000742 -
Tan11g1218 1499 FunFam Fibrillin 2 1051 1095 - -
Tan11g1218 1499 SUPERFAMILY Protein kinase-like (PK-like) 1161 1454 IPR011009 -
Tan11g1218 1499 Pfam Wall-associated receptor kinase galacturonan-binding 800 858 IPR025287 GO:0030247(InterPro)
Tan11g1218 1499 Gene3D Phosphorylase Kinase; domain 1 397 500 - -
Tan11g1218 1499 Gene3D Phosphorylase Kinase; domain 1 1153 1256 - -
Tan11g1218 1499 Pfam Protein kinase domain 1183 1450 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g1218 1499 Pfam Calcium-binding EGF domain 1056 1092 IPR049883 -
Tan11g1218 1499 Pfam Calcium-binding EGF domain 301 333 IPR049883 -
Tan11g1218 1499 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 1073 1084 IPR000152 -
Tan11g1218 1499 SMART egf_5 1059 1100 IPR000742 -
Tan11g1218 1499 SMART egf_5 253 300 IPR000742 -
Tan11g1218 1499 SMART egf_5 304 344 IPR000742 -
Tan11g1218 1499 SMART egf_5 1008 1055 IPR000742 -
Tan11g1218 1499 CDD STKc_IRAK 431 699 - -
Tan11g1218 1499 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 41 715 IPR045274 GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0007166(InterPro)|GO:0007166(PANTHER)
Tan11g1218 1499 ProSiteProfiles Protein kinase domain profile. 425 708 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g1218 1499 FunFam Fibrillin 2 296 339 - -
Tan11g1218 1499 Gene3D Transferase(Phosphotransferase) domain 1 501 715 - -
Tan11g1218 1499 Gene3D Transferase(Phosphotransferase) domain 1 1257 1474 - -
Tan11g1218 1499 CDD EGF_CA 301 335 - -
Tan11g1218 1499 ProSiteProfiles Protein kinase domain profile. 1181 1461 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g1218 1499 Gene3D Laminin 1003 1099 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0569 Tan-Chr9:50384667 Tan11g1218 Tan-Chr11:10164484 3.00E-95 dispersed
Tan09g0570 Tan-Chr9:50481496 Tan11g1218 Tan-Chr11:10164484 1.20E-91 dispersed
Tan11g1218 Tan-Chr11:10164484 Tan11g1221 Tan-Chr11:10249675 1.00E-276 dispersed
Tan11g1218 Tan-Chr11:10164484 Tan11g1220 Tan-Chr11:10227376 4.50E-280 proximal
Tan01g5186 Tan-Chr1:116854745 Tan11g1218 Tan-Chr11:10164484 1.10E-191 transposed
Tan01g3290 Tan-Chr1:88338933 Tan11g1218 Tan-Chr11:10164484 5.50E-175 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68204 PF00069 Pkinase 2.30E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1218 - - - 0.0