Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1221 ATGGAGGGGCTTGTGCGACGAATCATGATGATGAATATAGGCATATTAGCAGTGGCAGCAGCGGCGGTAGCTTCTCAAGCCAAACCCGGATGCGAGGATAAGTGTGACAACTTAGAAATTCCATATCCATTCGGGACGAGCAAAGAGTGTTATCTTGATGAAAAATTCTTCATTGCGTGTAACAAAACTCATTATGATCCTCCAAAGGCATTTCTAATGGGCAGCAACATCGAAGTAACCAATATATCCCTCAGTGGTGAGCTCCAAATCTTGCAATACATAGCCAGAGATTGTTACACACAAGATGGTCCCAAATTCTCCAACAGACCCACTCTCAGCGTTCCCATGTTCACCATTTCCAACACCAAGAACAAATTCACCGTCATCGGCTGTGATACTTACGCTTATATTTACGGCCAACTCGAGGGTGAATCCTACTCAGGTGGATGCATTGGGTGGTGTGAAAGCAATCCTAAAACAGTGAGAGAAGGGTCCTGCTCTGGCAATGGGTGCTGTCAGTTGGAGATTCCCAAAGGCCTAAAAGATTTGAGGTTGGAAGTTTATAGCTTCAAGAATCACACTAACGTACTCGACTTCAATCCTTGTGGGTATGCTTTTGTGATTGAACAAGACAAGTTCAATTTCTCTTACTCATATTTTCGTGAATTTACTGAGGAGAGAGTCCCTTTGGTGCTTGATTGGGGTATCAAAAATGATACTTGCTTAACAACTAACAACGCAGATAATTGCCTATGTGGAGCACACAGCAAAAAGAATTCTAGCTTCTCTGTGGATGGATCTGAATATTACTGTCAGTGTTTGGATGGTTTTGAGGGGAATCCATATCTCGGTTGTCAAAATATAAACGAATGCGAGAGACAGCTCCATAATTGTCTTAGCATAGATCACTGTAAAGACATAGATGGAAGCTATACTTGCTATTGTCCTGAAGGCTATGGAGATGGAACAAAAAATGGAACCCGTTGCACCACAAACTCTAAGTCTCCGGCCCGTATCATCGTTGGAATTGGTGTAGGTTTCACAGTTTTGCTGATTGGTAGTACATGGATGTACTTGGTTTACAAAAGGTGGAAGTTCATCCATCGAAAAGATAAGTTTTTTAAGAATAATGGAGGCTTCTTGCTTCAGCAACATCTTTCTCAAGGACAGTCATCCACCAACGCTGTCAGAATTTTCACCCAAGAAGAGCTTGAAAGGGCTACAAACAAGTTCCATGAAAGCGCCGTGGTTGGAAAAGGTGGCTATGGCACTGTTTACAAAGGAGTCTTCCACGACGGTTTGGTAGTTGCAATTAAGAAATCAAAATTAGTGGACCAATCCCAAACTTCCCAATTCATTAACGAAGTCATTGTGTTGTCCAAAATCAACCATCGCAATGTGGTGAAGTTGCTAGGGTGTTGTTTAGAGACGGAAGTTCCATTGCTAGTATATGAGTTCATCACCAACGGCACACTTTTTGATCACATTCATGATAAATCTCTTTCATGGGAAGCTCGTTTGAAAATAGCTTCTCAAACTGCAGGTGTCCTTTCGTATTTGCATTCCTCAGCTTCTACTCCCATTATCCACAGAGATATCAAGTCCACTAATATACTTTTAGACCATAATTATACTGCAAAAGTCTCTGATTTCGGTGCTTCGAAATTGGTTCCATTGGATCAAACTCAGCTATCCACGATGGTGCAAGGGACACTCGGATATTTGGATCCTGAGTACTTGTTAACAAGCGAGTTGACAGAGAAGAGTGACGTGTACAGCTTTGGAATTGTGCTTCTTGAGCTTATAACTGGGAAGAAGGCGGTGCGTTTCGATGGGCCGGAAGTAGAGAGGAATCTAGCCATGTACGTTCTTTGTGCGATGAAAGAAAATCGTGTTGAAGATGTTGTTGAGATGGGAATGTCGACAGAAGTGAACTTTGAGCAGATAAAAGAAGTGGCAAAGCTAGCAAAAGAGTGTTTGAGAGTAAAAGGTGAGGAGCGACCCACCATGAAGGAGGTAGCAATGGAGTTAGAGAGACTTGGACAGATGCAGATTGAGCATTCATGGGCACGTAACAATTTATCCAACGTAGAAGAGATGGCCTATTTGCTGGATGGAGCTTCAAACTCAAGCTCATTTGTTGTTGGTGACAGTTTGAATACTATGGACTATAACATAAAGGCTCAAATTTTGTCACGTATCCCCGACGGAAGATGA 2217 42.35 MEGLVRRIMMMNIGILAVAAAAVASQAKPGCEDKCDNLEIPYPFGTSKECYLDEKFFIACNKTHYDPPKAFLMGSNIEVTNISLSGELQILQYIARDCYTQDGPKFSNRPTLSVPMFTISNTKNKFTVIGCDTYAYIYGQLEGESYSGGCIGWCESNPKTVREGSCSGNGCCQLEIPKGLKDLRLEVYSFKNHTNVLDFNPCGYAFVIEQDKFNFSYSYFREFTEERVPLVLDWGIKNDTCLTTNNADNCLCGAHSKKNSSFSVDGSEYYCQCLDGFEGNPYLGCQNINECERQLHNCLSIDHCKDIDGSYTCYCPEGYGDGTKNGTRCTTNSKSPARIIVGIGVGFTVLLIGSTWMYLVYKRWKFIHRKDKFFKNNGGFLLQQHLSQGQSSTNAVRIFTQEELERATNKFHESAVVGKGGYGTVYKGVFHDGLVVAIKKSKLVDQSQTSQFINEVIVLSKINHRNVVKLLGCCLETEVPLLVYEFITNGTLFDHIHDKSLSWEARLKIASQTAGVLSYLHSSASTPIIHRDIKSTNILLDHNYTAKVSDFGASKLVPLDQTQLSTMVQGTLGYLDPEYLLTSELTEKSDVYSFGIVLLELITGKKAVRFDGPEVERNLAMYVLCAMKENRVEDVVEMGMSTEVNFEQIKEVAKLAKECLRVKGEERPTMKEVAMELERLGQMQIEHSWARNNLSNVEEMAYLLDGASNSSSFVVGDSLNTMDYNIKAQILSRIPDGR 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10249675 10253021 + Tan0000850.1 Tan11g1221 768158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1221 738 ProSitePatterns Calcium-binding EGF-like domain signature. 287 313 IPR018097 GO:0005509(InterPro)
Tan11g1221 738 FunFam Wall-associated receptor kinase 2 487 701 - -
Tan11g1221 738 Gene3D Phosphorylase Kinase; domain 1 382 486 - -
Tan11g1221 738 CDD EGF_CA 287 319 - -
Tan11g1221 738 ProSitePatterns Serine/Threonine protein kinases active-site signature. 528 540 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g1221 738 ProSiteProfiles Protein kinase domain profile. 411 690 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g1221 738 CDD STKc_IRAK 417 680 - -
Tan11g1221 738 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524(InterPro)
Tan11g1221 738 ProSiteProfiles EGF-like domain profile. 287 330 IPR000742 -
Tan11g1221 738 SMART serkin_6 411 680 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g1221 738 FunFam Wall-associated receptor kinase 2 381 486 - -
Tan11g1221 738 Pfam Calcium-binding EGF domain 288 329 IPR049883 -
Tan11g1221 738 Gene3D Plasmodium vivax P25 domain 232 337 - -
Tan11g1221 738 SUPERFAMILY Protein kinase-like (PK-like) 391 678 IPR011009 -
Tan11g1221 738 SMART egfca_6 287 330 IPR001881 GO:0005509(InterPro)
Tan11g1221 738 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 304 315 IPR000152 -
Tan11g1221 738 FunFam Fibrillin 2 282 326 - -
Tan11g1221 738 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 27 681 IPR045274 GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0007166(InterPro)|GO:0007166(PANTHER)
Tan11g1221 738 Pfam Protein kinase domain 412 673 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g1221 738 Gene3D Transferase(Phosphotransferase) domain 1 487 700 - -
Tan11g1221 738 Pfam Wall-associated receptor kinase galacturonan-binding 31 86 IPR025287 GO:0030247(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g5186 Tan-Chr1:116854745 Tan11g1221 Tan-Chr11:10249675 2.00E-180 dispersed
Tan11g1218 Tan-Chr11:10164484 Tan11g1221 Tan-Chr11:10249675 1.00E-276 dispersed
Tan11g1221 Tan-Chr11:10249675 Tan01g4444 Tan-Chr1:109800869 5.50E-61 dispersed
Tan11g1220 Tan-Chr11:10227376 Tan11g1221 Tan-Chr11:10249675 1.40E-266 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68206 PF00069 Pkinase 1.10E-49 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1221 - - - 0.0