Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1251 ATGAGTACGGCGGCGATACCGTCTTTTGGCGGTGGCAGCAACCGCATAGCGGCGGAGAGGACGACGCCTCCGGCCAACGCCGTCAAGCTACCAAATCACCAAGGAGAACAAACCACAACCAATCAGAAACCTGGATGGAGAAAGTTTCTTTCACACGTTGGCCCTGGCTTCCTCGTCTCATTGGCTTACCTTGATCCTGGCAACTTGGAAACCGACTTGCAGGCTGGAGCTAATCATGGATATGAGCTTTTGTGGGTGGTGCTTATCGGATTAATATTTGCACTCATAATCCAATCCCTCGCTGCAAATCTCGGCGTAAGCACCGGAAAACACCTTTCAGAAGTTTGCAAGGCCGAATATCCAAAATTTGTGAAGTACTGCCTTTGGTTGCTGGCTGAAGTTGCTGTAATAGCCGCCGATATTCCAGAAGTGATAGGAACGGCCTTTGCTCTGAATATTCTATTCCATATTCCAGTTTGGGCTGGAGTTCTTCTCACCGGTTTAAGCACCCTCTTGCTCCTTGGACTCCAGAGATATGGGGCGAGGAAGCTTGAATTGCTAATAGCAATACTGGTATTCGTAATGGCGGCGTGTTTCTTCGGGGAAATGAGCTATGTTAAGCCGCCGGCGACCGGCGTTTTAAAAGGAATGTTTGTGCCCAAACTCAACGGCCAGGGAGCCACCGGCGACGCCATTGCTCTCCTCGGCGCTCTCGTTATGCCGCACAATCTCTTTCTTCATTCGGCTCTCGTGCTCTCAAGGAAAGTGCCAAATTCCGTCCGTGGTATCAACGACGCATGCAGGTACTTCCTAATAGAGAGCGGATTTGCATTGTTCGTAGCGTTTTTAATAAACGTGGCCGTCATTTCAGTTTCCGGCACCGTTTGTACGGTCGGTAAAATCTCTCAATCCACCGCCGATCAGTGCTCCGATATTACCCTCAACTCCGCCTCCTTCCTCCTCCAGAACGTTTTGGGAAAATCGAGCTCCACTATTTACGCCATTGCGTTGCTTGCCTCCGGACAAAGCTCCAGCATCACCGGCACTTATGCCGGGCAGTTCATCATGCAGGGATTTTTGGACCTGAAAATGAAAACATGGGCAAGGAACCTTATGACGAGGTCCATTGCCATTACGCCCAGTCTTATTGTCTCCATTATCGGTGGACCTCAAGGAGCTGGACGTCTAATCATTATTGCATCGATGATTCTTTCCTTCGAACTCCCCTTCGCTCTAATTCCACTCCTCAAATTCAGTAGTAGCACCACCAAGATGGGCCCCCACAAGAATTCCATATACATCATTGTAATCTCATGGATATTGGGCCTTGCAATTATCGGAATCAACATCTATTATCTGAGTACGGGGTTCGTGGGCTGGCTAATCGACAACAATTTATCCAAAGTTGCAAATGTATTCATTGGGATCGTTGTATTTCCATTGATGGCCATTTATATTCTTGCTGTTATTTACCTAACGTTTCGAAAGGATAGGGTTGTGACTTTCATTGAGCCCGAAAAGCACGATCCTATGGCCCAAGCCCATATGGAAAGTGGGCTAAGTAATTCTTTTGGGCCTGGTGACGTTGCCCCCGTTCCGTTTAGAGAGGATTTGGCCCATATTCCACTTCCAGAGTAG 1638 48.41 MSTAAIPSFGGGSNRIAAERTTPPANAVKLPNHQGEQTTTNQKPGWRKFLSHVGPGFLVSLAYLDPGNLETDLQAGANHGYELLWVVLIGLIFALIIQSLAANLGVSTGKHLSEVCKAEYPKFVKYCLWLLAEVAVIAADIPEVIGTAFALNILFHIPVWAGVLLTGLSTLLLLGLQRYGARKLELLIAILVFVMAACFFGEMSYVKPPATGVLKGMFVPKLNGQGATGDAIALLGALVMPHNLFLHSALVLSRKVPNSVRGINDACRYFLIESGFALFVAFLINVAVISVSGTVCTVGKISQSTADQCSDITLNSASFLLQNVLGKSSSTIYAIALLASGQSSSITGTYAGQFIMQGFLDLKMKTWARNLMTRSIAITPSLIVSIIGGPQGAGRLIIIASMILSFELPFALIPLLKFSSSTTKMGPHKNSIYIIVISWILGLAIIGINIYYLSTGFVGWLIDNNLSKVANVFIGIVVFPLMAIYILAVIYLTFRKDRVVTFIEPEKHDPMAQAHMESGLSNSFGPGDVAPVPFREDLAHIPLPE 545
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 10668825 10676551 + Tan0006547.1 Tan11g1251 768188
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1251 545 Hamap Divalent metal cation transporter MntH [mntH]. 36 457 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Tan11g1251 545 PRINTS Natural resistance-associated macrophage protein signature 401 420 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Tan11g1251 545 PRINTS Natural resistance-associated macrophage protein signature 128 154 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Tan11g1251 545 PRINTS Natural resistance-associated macrophage protein signature 341 360 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Tan11g1251 545 PRINTS Natural resistance-associated macrophage protein signature 181 202 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Tan11g1251 545 PRINTS Natural resistance-associated macrophage protein signature 156 175 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Tan11g1251 545 PRINTS Natural resistance-associated macrophage protein signature 231 254 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Tan11g1251 545 PRINTS Natural resistance-associated macrophage protein signature 369 386 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Tan11g1251 545 Pfam Natural resistance-associated macrophage protein-like 70 431 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Tan11g1251 545 NCBIfam Nramp family divalent metal transporter 54 420 - -
Tan11g1251 545 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 47 423 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
Tan11g1251 545 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 36 504 IPR001046 GO:0005384(PANTHER)|GO:0015086(PANTHER)|GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2508 Tan-Chr4:84010256 Tan11g1251 Tan-Chr11:10668825 2.40E-170 dispersed
Tan05g1588 Tan-Chr5:38223023 Tan11g1251 Tan-Chr11:10668825 2.30E-87 dispersed
Tan05g1589 Tan-Chr5:38223023 Tan11g1251 Tan-Chr11:10668825 2.30E-87 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1251 K21398 - csv:101219356 957.977