Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan11g1251 | ATGAGTACGGCGGCGATACCGTCTTTTGGCGGTGGCAGCAACCGCATAGCGGCGGAGAGGACGACGCCTCCGGCCAACGCCGTCAAGCTACCAAATCACCAAGGAGAACAAACCACAACCAATCAGAAACCTGGATGGAGAAAGTTTCTTTCACACGTTGGCCCTGGCTTCCTCGTCTCATTGGCTTACCTTGATCCTGGCAACTTGGAAACCGACTTGCAGGCTGGAGCTAATCATGGATATGAGCTTTTGTGGGTGGTGCTTATCGGATTAATATTTGCACTCATAATCCAATCCCTCGCTGCAAATCTCGGCGTAAGCACCGGAAAACACCTTTCAGAAGTTTGCAAGGCCGAATATCCAAAATTTGTGAAGTACTGCCTTTGGTTGCTGGCTGAAGTTGCTGTAATAGCCGCCGATATTCCAGAAGTGATAGGAACGGCCTTTGCTCTGAATATTCTATTCCATATTCCAGTTTGGGCTGGAGTTCTTCTCACCGGTTTAAGCACCCTCTTGCTCCTTGGACTCCAGAGATATGGGGCGAGGAAGCTTGAATTGCTAATAGCAATACTGGTATTCGTAATGGCGGCGTGTTTCTTCGGGGAAATGAGCTATGTTAAGCCGCCGGCGACCGGCGTTTTAAAAGGAATGTTTGTGCCCAAACTCAACGGCCAGGGAGCCACCGGCGACGCCATTGCTCTCCTCGGCGCTCTCGTTATGCCGCACAATCTCTTTCTTCATTCGGCTCTCGTGCTCTCAAGGAAAGTGCCAAATTCCGTCCGTGGTATCAACGACGCATGCAGGTACTTCCTAATAGAGAGCGGATTTGCATTGTTCGTAGCGTTTTTAATAAACGTGGCCGTCATTTCAGTTTCCGGCACCGTTTGTACGGTCGGTAAAATCTCTCAATCCACCGCCGATCAGTGCTCCGATATTACCCTCAACTCCGCCTCCTTCCTCCTCCAGAACGTTTTGGGAAAATCGAGCTCCACTATTTACGCCATTGCGTTGCTTGCCTCCGGACAAAGCTCCAGCATCACCGGCACTTATGCCGGGCAGTTCATCATGCAGGGATTTTTGGACCTGAAAATGAAAACATGGGCAAGGAACCTTATGACGAGGTCCATTGCCATTACGCCCAGTCTTATTGTCTCCATTATCGGTGGACCTCAAGGAGCTGGACGTCTAATCATTATTGCATCGATGATTCTTTCCTTCGAACTCCCCTTCGCTCTAATTCCACTCCTCAAATTCAGTAGTAGCACCACCAAGATGGGCCCCCACAAGAATTCCATATACATCATTGTAATCTCATGGATATTGGGCCTTGCAATTATCGGAATCAACATCTATTATCTGAGTACGGGGTTCGTGGGCTGGCTAATCGACAACAATTTATCCAAAGTTGCAAATGTATTCATTGGGATCGTTGTATTTCCATTGATGGCCATTTATATTCTTGCTGTTATTTACCTAACGTTTCGAAAGGATAGGGTTGTGACTTTCATTGAGCCCGAAAAGCACGATCCTATGGCCCAAGCCCATATGGAAAGTGGGCTAAGTAATTCTTTTGGGCCTGGTGACGTTGCCCCCGTTCCGTTTAGAGAGGATTTGGCCCATATTCCACTTCCAGAGTAG | 1638 | 48.41 | MSTAAIPSFGGGSNRIAAERTTPPANAVKLPNHQGEQTTTNQKPGWRKFLSHVGPGFLVSLAYLDPGNLETDLQAGANHGYELLWVVLIGLIFALIIQSLAANLGVSTGKHLSEVCKAEYPKFVKYCLWLLAEVAVIAADIPEVIGTAFALNILFHIPVWAGVLLTGLSTLLLLGLQRYGARKLELLIAILVFVMAACFFGEMSYVKPPATGVLKGMFVPKLNGQGATGDAIALLGALVMPHNLFLHSALVLSRKVPNSVRGINDACRYFLIESGFALFVAFLINVAVISVSGTVCTVGKISQSTADQCSDITLNSASFLLQNVLGKSSSTIYAIALLASGQSSSITGTYAGQFIMQGFLDLKMKTWARNLMTRSIAITPSLIVSIIGGPQGAGRLIIIASMILSFELPFALIPLLKFSSSTTKMGPHKNSIYIIVISWILGLAIIGINIYYLSTGFVGWLIDNNLSKVANVFIGIVVFPLMAIYILAVIYLTFRKDRVVTFIEPEKHDPMAQAHMESGLSNSFGPGDVAPVPFREDLAHIPLPE | 545 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 10668825 | 10676551 | + | Tan0006547.1 | Tan11g1251 | 768188 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan11g1251 | 545 | Hamap | Divalent metal cation transporter MntH [mntH]. | 36 | 457 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Tan11g1251 | 545 | PRINTS | Natural resistance-associated macrophage protein signature | 401 | 420 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Tan11g1251 | 545 | PRINTS | Natural resistance-associated macrophage protein signature | 128 | 154 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Tan11g1251 | 545 | PRINTS | Natural resistance-associated macrophage protein signature | 341 | 360 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Tan11g1251 | 545 | PRINTS | Natural resistance-associated macrophage protein signature | 181 | 202 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Tan11g1251 | 545 | PRINTS | Natural resistance-associated macrophage protein signature | 156 | 175 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Tan11g1251 | 545 | PRINTS | Natural resistance-associated macrophage protein signature | 231 | 254 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Tan11g1251 | 545 | PRINTS | Natural resistance-associated macrophage protein signature | 369 | 386 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Tan11g1251 | 545 | Pfam | Natural resistance-associated macrophage protein-like | 70 | 431 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Tan11g1251 | 545 | NCBIfam | Nramp family divalent metal transporter | 54 | 420 | - | - | |
| Tan11g1251 | 545 | NCBIfam | metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family | 47 | 423 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Tan11g1251 | 545 | PANTHER | SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER | 36 | 504 | IPR001046 | GO:0005384(PANTHER)|GO:0015086(PANTHER)|GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan04g2508 | Tan-Chr4:84010256 | Tan11g1251 | Tan-Chr11:10668825 | 2.40E-170 | dispersed | |
| Tan05g1588 | Tan-Chr5:38223023 | Tan11g1251 | Tan-Chr11:10668825 | 2.30E-87 | dispersed | |
| Tan05g1589 | Tan-Chr5:38223023 | Tan11g1251 | Tan-Chr11:10668825 | 2.30E-87 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan11g1251 | K21398 | - | csv:101219356 | 957.977 |