Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan11g1266 | ATGGAGTTAAAAGCAGCAGATGTAGCAGAAGTTCAACAAGTACAGCAACATTTCCATGTGCTGGCAGTGGATGATAGCCTTATTGACAGAAAGCTTTTGGAAAAGCTGCTAAGAATTTCTTCATGCGAAGTGACCTGCGTGGAGTCTGGAGACAAAGCTCTTAGATATCTGGGTCTTCTTGATGATCTTGACAAATTTTCTTCTTCTGCTGCTTCATTTTCTTCCCCACAACCACAACTCTCCAACCAACAGGAAGTCAAAGTCAACCTAATCATGACAGACTACTGTATGCCTGGGATGACTGGTTATGATCTACTCAAACGACTTAAGGGATCTTCTTGGAAAGATATTCCTGTTGTTGTCATGTCATCAGAGAACGAACCTTCAAGAATCAACATGTGCTTGGAAGAAGGGGCAGAGGAATTTCTTTTGAAGCCTCTTCAATTATCAGACGTGAAGAAGCTCGAGCCTCACCTTCAAAGGTCTCTCAGCCGTTCATCTGCAGAAATCAAGGAAGAAGAAACCAGCGGAGTCGGAGTCGGAGTCGGAATCGAAATGGCTACTTCCGAAATCATTGACGACGAAAACAACTCAAAAGAAGACATTAACAAGAACGACAATAACAATACCTTCAGTAAGAGAAAAGCCGCGAATCCAGAGCCATCTGAAAGACGACCAAAACTGAAAGAATTGCAAGCTGCAGGATAA | 708 | 42.8 | MELKAADVAEVQQVQQHFHVLAVDDSLIDRKLLEKLLRISSCEVTCVESGDKALRYLGLLDDLDKFSSSAASFSSPQPQLSNQQEVKVNLIMTDYCMPGMTGYDLLKRLKGSSWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSDVKKLEPHLQRSLSRSSAEIKEEETSGVGVGVGIEMATSEIIDDENNSKEDINKNDNNNTFSKRKAANPEPSERRPKLKELQAAG | 235 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 10792753 | 10796061 | - | Tan0022658.1 | Tan11g1266 | 768203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan11g1266 | 235 | CDD | REC_typeA_ARR | 20 | 155 | - | - | |
| Tan11g1266 | 235 | MobiDBLite | consensus disorder prediction | 217 | 235 | - | - | |
| Tan11g1266 | 235 | MobiDBLite | consensus disorder prediction | 191 | 235 | - | - | |
| Tan11g1266 | 235 | Pfam | Response regulator receiver domain | 69 | 153 | IPR001789 | GO:0000160(InterPro) | |
| Tan11g1266 | 235 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 15 | 225 | IPR045279 | GO:0009736(InterPro) | |
| Tan11g1266 | 235 | MobiDBLite | consensus disorder prediction | 192 | 208 | - | - | |
| Tan11g1266 | 235 | SUPERFAMILY | CheY-like | 18 | 154 | IPR011006 | - | |
| Tan11g1266 | 235 | SMART | REC_2 | 18 | 156 | IPR001789 | GO:0000160(InterPro) | |
| Tan11g1266 | 235 | Gene3D | - | 19 | 218 | - | - | |
| Tan11g1266 | 235 | ProSiteProfiles | Response regulatory domain profile. | 19 | 160 | IPR001789 | GO:0000160(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g3993 | Tan-Chr1:104864493 | Tan11g1266 | Tan-Chr11:10792753 | 1.50E-48 | dispersed | |
| Tan11g1266 | Tan-Chr11:10792753 | Tan11g1593 | Tan-Chr11:14982887 | 9.90E-41 | dispersed | |
| Tan11g1266 | Tan-Chr11:10792753 | Tan09g2194 | Tan-Chr9:71968697 | 3.30E-36 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 28724 | PF00072 | Response_reg | 9.40E-16 | CL0304 | Tan | TR |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan11g1266 | K14492 | - | csv:101216267 | 294.664 |