Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1293 ATGGAAATTATTGAAAAAATTTGGAGAATGATGAAAAAAATGAAGGCTTATTTTATTGTGGTGTTTCTGCAGATTTCATTTGCAGTTTTGTACACCATTGTAGCTATTTCTCTTAAGCATGGCCTTAGCCATTTCGTGTTGTCTGTCTATCGCCATGCAATTGCCACCGTTCTTCTCGTCCCCTTCGCTCTCATTCTCGAAAGGAAGACGAGACCTCGAATGACATTGCCCATCTTCTTAAGAATCTTGTTGCTTGGTTTTATAGAGCCAGTTCTCGACCAGAATTTATACTATTTGGGAATGAAGTACACTTCGGCAACATTTGCCTCTGCCGCCGTCAATGTCCTTCCGGCCATAACCTTCATCCTCGCCGTCATTTTCAGGCTGGAAATCATCAACCTAAAGAAAAAACGAGGCTTAGCGAAGGTAGCCGGAACTGTTATAACGGTCACCGGAGCTATGGTTATGAGTCTGTACAAAGGGCCTGCTTTCAATTTCCTTCCGAGCGGCGGCCGTAGCAAAATGAGTCACAACGAAACGGCGACGAATGAGTCGACAGACCAGCACTGGGTCACCGGCACCATCTTCGTCCTCATCAGTTGCTGCGGCTGGTCCGGCTTCTATATTTTGCAGTCAGTGACATTAAAAATGTACCCGGCGGAGATATCACTGGCAGCTTTAATATGCTTAACCGGAATGGTGGAAGGAGGAGCTGTAACTCTCGCCGCCGAACGCAACATGATGGTCTGGATTATCGGCTGGGATTCCACACTTCTCGCCGTCCTTTACTCCGGAATAGTATGCTCTGGAATAGCATATTACGTTCAAGGCGTTGTGATGAAGGAACGAGGTCCAGTTTTTGTAACATCCTTTAGTCCTCTCTGTACGGTCATCACGGCGGCTCTCGGCTCCATTTTCTTAGCCGAGAAAGTTCATCTTGGAAGTTTGATTGGGTCGGCGATCGTGGTATTAGGATTGTATACGGTGATTTGGGGCAAAAGCAGAGATTTTGAAACCTCAAAACAATCTAATGATAACAAGGAATTGCCGATCACAGATTCTACTTTCCGATCAACGGCGCCTGGTGATGATTCCAATGCCGGTGATGTTTCCGGGAAGACGGCCGAGGCTCCGGCCAACCCTCCAATTCTCTAA 1155 46.67 MEIIEKIWRMMKKMKAYFIVVFLQISFAVLYTIVAISLKHGLSHFVLSVYRHAIATVLLVPFALILERKTRPRMTLPIFLRILLLGFIEPVLDQNLYYLGMKYTSATFASAAVNVLPAITFILAVIFRLEIINLKKKRGLAKVAGTVITVTGAMVMSLYKGPAFNFLPSGGRSKMSHNETATNESTDQHWVTGTIFVLISCCGWSGFYILQSVTLKMYPAEISLAALICLTGMVEGGAVTLAAERNMMVWIIGWDSTLLAVLYSGIVCSGIAYYVQGVVMKERGPVFVTSFSPLCTVITAALGSIFLAEKVHLGSLIGSAIVVLGLYTVIWGKSRDFETSKQSNDNKELPITDSTFRSTAPGDDSNAGDVSGKTAEAPANPPIL 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11016209 11022392 - Tan0018071.1 Tan11g1293 768230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1293 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Tan11g1293 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 335 - -
Tan11g1293 384 PANTHER WAT1-RELATED PROTEIN 20 343 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan11g1293 384 MobiDBLite consensus disorder prediction 344 365 - -
Tan11g1293 384 MobiDBLite consensus disorder prediction 339 384 - -
Tan11g1293 384 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020(InterPro)
Tan11g1293 384 Pfam EamA-like transporter family 18 157 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4012 Tan-Chr1:105039449 Tan11g1293 Tan-Chr11:11016209 2.40E-113 dispersed
Tan01g4019 Tan-Chr1:105138153 Tan11g1293 Tan-Chr11:11016209 6.60E-94 dispersed
Tan11g1140 Tan-Chr11:9010081 Tan11g1293 Tan-Chr11:11016209 2.80E-50 dispersed
Tan11g1293 Tan-Chr11:11016209 Tan11g1295 Tan-Chr11:11026334 1.40E-100 dispersed
Tan11g1293 Tan-Chr11:11016209 Tan11g1294 Tan-Chr11:11018010 3.60E-141 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1293 - - - 0.0