Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1295 ATGATGATGATGGGTGTGAATTCTAATATAATGAGTAAGTTGAAGCCTTACATTCTAGTGATAAGCCTACAATTTGGAATGGCGGGCATATATGTAATATCCATGGCCACTCTTAACCAAGGCATGAGTCGCTATGTGTTGATCGTGTATCGAAACATCGTTGCTGCTCTCTTTCTCGCTCCTTTCGCTCTAATCTTCGAAAGGAAAACAAGGCCAAAAATGACACTCCGGGTCGCTTTGCAAATCATGGCTTTAGGCTTTCTAGAGCCAGTTGTCGATCAGGGGTTCGGTTATTTGGGAATGTCGTACACATCAGCATCATTTACTTCGGCCATAATGAACGCTGTGCCTTCTATTACCTTTATCATTGCAGTCATTTTTCGAATGGAGCGTGTAAATTTAAAACAAGCACGAGGGGTAGCCAAGGTCATTGGCACTTTGGTGACCTTCGCCGGAGCTTTGGCTATGACACTTTACAAAGGCCCAATTCTCGATTTCTTTTGGACTCGAAAAACCAACCACCACGTCAACAGCGGCGCCGCCGCCGCTAATCAGCACTGGGTGGCCGGAACTTTGTTCATCCTTCTCGCTTGTGTGGCTTGGTCTTGTTTCTATATATTACAATCTGTAACAGTAAAGAGATACCCAGCGGAGCTGTCTCTTTCGACATTGATATGCTTGGCTGGTGTTCTTCAAAGCTCAGTGATAGCAGTTGCTGTAGAGCATCGAGCTAGCGCATGGGCGGTGGGCTGGGACTCCAGGCTTCTGGCTCCTCTCTATACGGGAATAGTTGGCTCAGGAATTGCATATTACTTCCAAGCTTTGGTTATGAAGACCAGAGGCCCTGTATTTGTGACGGCTTTCAACCCTTTATGTATGGTTGTTGTCACTATAATGTCCTCCATCATTCTTGCCGAGAAGATCCATCTTGGAAGTGTTATTGGAGCCATTATCATCGCAATTGGGCTTTATTCAGTTGTTTGGGGCAAAAGCAAGGATTATTCCACCGCCGCCGTCCACCTCGAAAAGCCTAACGCCGCCGTGCCGGAGCTCCCAATTACTGCCTCTAAACTCCCCGCCGAACAGGATGCTCACGATATTCTTCAACCTCCAAAATGA 1119 46.56 MMMMGVNSNIMSKLKPYILVISLQFGMAGIYVISMATLNQGMSRYVLIVYRNIVAALFLAPFALIFERKTRPKMTLRVALQIMALGFLEPVVDQGFGYLGMSYTSASFTSAIMNAVPSITFIIAVIFRMERVNLKQARGVAKVIGTLVTFAGALAMTLYKGPILDFFWTRKTNHHVNSGAAAANQHWVAGTLFILLACVAWSCFYILQSVTVKRYPAELSLSTLICLAGVLQSSVIAVAVEHRASAWAVGWDSRLLAPLYTGIVGSGIAYYFQALVMKTRGPVFVTAFNPLCMVVVTIMSSIILAEKIHLGSVIGAIIIAIGLYSVVWGKSKDYSTAAVHLEKPNAAVPELPITASKLPAEQDAHDILQPPK 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11026334 11034524 - Tan0020113.1 Tan11g1295 768232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1295 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 331 - -
Tan11g1295 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 157 - -
Tan11g1295 372 PANTHER WAT1-RELATED PROTEIN 19 334 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan11g1295 372 Pfam EamA-like transporter family 17 145 IPR000620 GO:0016020(InterPro)
Tan11g1295 372 Pfam EamA-like transporter family 190 327 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2424 Tan-Chr6:76736919 Tan11g1295 Tan-Chr11:11026334 5.00E-53 dispersed
Tan06g2425 Tan-Chr6:76736919 Tan11g1295 Tan-Chr11:11026334 1.10E-48 dispersed
Tan08g1287 Tan-Chr8:43761805 Tan11g1295 Tan-Chr11:11026334 8.50E-93 dispersed
Tan08g1288 Tan-Chr8:43761805 Tan11g1295 Tan-Chr11:11026334 3.10E-65 dispersed
Tan09g1858 Tan-Chr9:69866110 Tan11g1295 Tan-Chr11:11026334 1.20E-58 dispersed
Tan11g0598 Tan-Chr11:5309320 Tan11g1295 Tan-Chr11:11026334 1.90E-46 dispersed
Tan11g0599 Tan-Chr11:5329032 Tan11g1295 Tan-Chr11:11026334 4.50E-40 dispersed
Tan11g0763 Tan-Chr11:6419484 Tan11g1295 Tan-Chr11:11026334 1.10E-74 dispersed
Tan11g0765 Tan-Chr11:6466453 Tan11g1295 Tan-Chr11:11026334 1.60E-85 dispersed
Tan11g1293 Tan-Chr11:11016209 Tan11g1295 Tan-Chr11:11026334 1.40E-100 dispersed
Tan11g1295 Tan-Chr11:11026334 Tan11g2035 Tan-Chr11:40353829 5.00E-55 dispersed
Tan11g1294 Tan-Chr11:11018010 Tan11g1295 Tan-Chr11:11026334 2.70E-69 tandem
Tan11g1295 Tan-Chr11:11026334 Tan11g1296 Tan-Chr11:11026334 2.50E-187 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1295 - - - 0.0