Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1296 ATGATGATGATGGGTGTGAATTCTAATATAATGAGTAAGTTGAAGCCTTACATTCTAGTGATAAGCCTACAATTTGGAATGGCGGGCATATATGTAATATCCATGGCCACTCTTAACCAAGGCATGAGTCGCTATGTGTTGATCGTGTATCGAAACATCGTTGCTGCTCTCTTTCTCGCTCCTTTCGCTCTAATCTTCGAAAGGCCAGTTGTCGATCAGGGGTTCGGTTATTTGGGAATGTCGTACACATCAGCATCATTTACTTCGGCCATAATGAACGCTGTGCCTTCTATTACCTTTATCATTGCAGTCATTTTTCGAATGGAGCGTGTAAATTTAAAACAAGCACGAGGGGTAGCCAAGGTCATTGGCACTTTGGTGACCTTCGCCGGAGCTTTGGCTATGACACTTTACAAAGGCCCAATTCTCGATTTCTTTTGGACTCGAAAAACCAACCACCACGTCAACAGCGGCGCCGCCGCCGCTAATCAGCACTGGGTGGCCGGAACTTTGTTCATCCTTCTCGCTTGTGTGGCTTGGTCTTGTTTCTATATATTACAATCTGTAACAGTAAAGAGATACCCAGCGGAGCTGTCTCTTTCGACATTGATATGCTTGGCTGGTGTTCTTCAAAGCTCAGTGATAGCAGTTGCTGTAGAGCATCGAGCTAGCGCATGGGCGGTGGGCTGGGACTCCAGGCTTCTGGCTCCTCTCTATACGGGAATAGTTGGCTCAGGAATTGCATATTACTTCCAAGCTTTGGTTATGAAGACCAGAGGCCCTGTATTTGTGACGGCTTTCAACCCTTTATGTATGGTTGTTGTCACTATAATGTCCTCCATCATTCTTGCCGAGAAGATCCATCTTGGAAGTGTTATTGGAGCCATTATCATCGCAATTGGGCTTTATTCAGTTGTTTGGGGCAAAAGCAAGGATTATTCCACCGCCGCCGTCCACCTCGAAAAGCCTAACGCCGCCGTGCCGGAGCTCCCAATTACTGCCTCTAAACTCCCCGCCGAACAGGATGCTCACGATATTCTTCAACCTCCAAAATGA 1056 46.69 MMMMGVNSNIMSKLKPYILVISLQFGMAGIYVISMATLNQGMSRYVLIVYRNIVAALFLAPFALIFERPVVDQGFGYLGMSYTSASFTSAIMNAVPSITFIIAVIFRMERVNLKQARGVAKVIGTLVTFAGALAMTLYKGPILDFFWTRKTNHHVNSGAAAANQHWVAGTLFILLACVAWSCFYILQSVTVKRYPAELSLSTLICLAGVLQSSVIAVAVEHRASAWAVGWDSRLLAPLYTGIVGSGIAYYFQALVMKTRGPVFVTAFNPLCMVVVTIMSSIILAEKIHLGSVIGAIIIAIGLYSVVWGKSKDYSTAAVHLEKPNAAVPELPITASKLPAEQDAHDILQPPK 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11026334 11034524 - Tan0020113.2 Tan11g1296 768233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1296 351 PANTHER WAT1-RELATED PROTEIN 19 313 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan11g1296 351 Pfam EamA-like transporter family 169 306 IPR000620 GO:0016020(InterPro)
Tan11g1296 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 137 - -
Tan11g1296 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 310 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g1294 Tan-Chr11:11018010 Tan11g1296 Tan-Chr11:11026334 3.70E-58 dispersed
Tan11g1296 Tan-Chr11:11026334 Tan11g2035 Tan-Chr11:40353829 2.30E-49 dispersed
Tan11g1295 Tan-Chr11:11026334 Tan11g1296 Tan-Chr11:11026334 2.50E-187 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1296 - - - 0.0