Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1315 ATGGCATCTGCCATGGCCAAACCCAAAATACAGAGAAAGATCATCAGACAGAACCATGAAAACCAGAAACCGAAGCCGCCGTCTTGGGCAGTTGTTAGAGGCATATTCAGTTGCAAGTACCTGCAGCCTCAACAGCAACCAGAAAAACAGCAGCATCAATTGCCACGCAAAGAGAAACAACAGGATCAAGCAACAGAAGAGAGTAGCAAGAACTGTAAGAAAATGAGGTGTTCGGGTTCACTCTGTAGCAACACCAAGGTAACACACAGGCTTGAAGCAGCAGCATCGCCAGAAGTTCACAAGAAAAGGGCATTGACTTCAATGGGTTCTAAAAACAATGAGTCTTCGAGTTCAAGTAGATCCACCAAAGCTCCTCCTTTGAACGAACAAAATGGTGTTCTATCAGCCACATGTTCATCGTTATCTGCATCATCATCTTCTAATTCCTCCAATGGTGCCTCTTTCAGAGGAATGCCTTTCAGGAGGTTCTATGGCTGTTATGAATGTAAAATGGTGATTGACCCTGTTCTTGGGATGACTAGAGATCCTTCTCTTAGAGCAACCATTTGCCCTTGTCCTGAATGTGGTGAGATTTTTATGAAAGCTGAAACTTTGGAGCTTCACCAGAGTGTTAGACATGCAGTATCTGAGCTTGGTCCTGAAGACACGAGCAAGAACATAGTGGAAATCATATTCCAGTCAAGCTGGCTGAAAAAGCAAGCCCCAATTTGCAAAATCGAAAGGATTCTCAAAGTCCAGAACACTCCAAAAACCATCTCGAAATTCGAGGAATACAGGGACTCCATTAAAGCCAAAGCCACAAAGCTTCCAAAGAAGTATCCACGTTGTATAGCAGATGGCAACGAACTCCTAAGGTTCCACTGCACCACCTTGGCCTGCTCATTGGGCCTAAATGGCTCCTCCAACCTCTGCAGTTCAATCCCACAATGCAATGTCTGTAGCATAATCAAGAATGGGTTCAAGGTGGCCGCAGAGGCCACCGGAAAGGGCATTCTAACAACAGCAACAAGTGGAAAGGCTCATGACAGCGCCGGAATATCATCGGACGGCAATGACAAACGAGCCATGCTGGTTTGCCGAGTAATAGCGGGCAGGGTGAAGAAGAGTTCAGAAGGCAGCATGGAGGATTATGATTCACTGGCCGGAGCAGCAGGCATGTATTCCAATTTGGATGAGTTATACGTGTTCAGTCCCAAGGCAATATTGCCCTGTTTTGTTGTCATTTATGGAGGGTTTTAA 1260 45.63 MASAMAKPKIQRKIIRQNHENQKPKPPSWAVVRGIFSCKYLQPQQQPEKQQHQLPRKEKQQDQATEESSKNCKKMRCSGSLCSNTKVTHRLEAAASPEVHKKRALTSMGSKNNESSSSSRSTKAPPLNEQNGVLSATCSSLSASSSSNSSNGASFRGMPFRRFYGCYECKMVIDPVLGMTRDPSLRATICPCPECGEIFMKAETLELHQSVRHAVSELGPEDTSKNIVEIIFQSSWLKKQAPICKIERILKVQNTPKTISKFEEYRDSIKAKATKLPKKYPRCIADGNELLRFHCTTLACSLGLNGSSNLCSSIPQCNVCSIIKNGFKVAAEATGKGILTTATSGKAHDSAGISSDGNDKRAMLVCRVIAGRVKKSSEGSMEDYDSLAGAAGMYSNLDELYVFSPKAILPCFVVIYGGF 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11348893 11350264 - Tan0013308.1 Tan11g1315 768252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1315 419 ProSiteProfiles Zinc finger C2H2 type domain profile. 190 218 IPR013087 -
Tan11g1315 419 MobiDBLite consensus disorder prediction 93 130 - -
Tan11g1315 419 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 28 416 - -
Tan11g1315 419 MobiDBLite consensus disorder prediction 51 70 - -
Tan11g1315 419 MobiDBLite consensus disorder prediction 42 70 - -
Tan11g1315 419 MobiDBLite consensus disorder prediction 93 107 - -
Tan11g1315 419 MobiDBLite consensus disorder prediction 1 29 - -
Tan11g1315 419 MobiDBLite consensus disorder prediction 108 130 - -
Tan11g1315 419 SUPERFAMILY ADP-ribosylation 215 417 - -
Tan11g1315 419 ProSitePatterns Zinc finger C2H2 type domain signature. 190 213 IPR013087 -
Tan11g1315 419 Gene3D - 214 417 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4499 Tan-Chr1:110613449 Tan11g1315 Tan-Chr11:11348893 5.20E-59 dispersed
Tan01g5010 Tan-Chr1:115817642 Tan11g1315 Tan-Chr11:11348893 2.30E-88 dispersed
Tan05g0455 Tan-Chr5:3161723 Tan11g1315 Tan-Chr11:11348893 5.80E-54 dispersed
Tan07g1840 Tan-Chr7:69954714 Tan11g1315 Tan-Chr11:11348893 4.30E-30 dispersed
Tan11g1315 Tan-Chr11:11348893 Tan01g1625 Tan-Chr1:16475212 6.90E-61 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28732 None None None None Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1315 - - - 0.0