Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g1341 | ATGCATCATCTGCCTCAGTTTTTCTCTCCTAGGAACCGAAGGAAAGCCATGGATCCGAGAAAAATTGCTGGGAAACCCAAGCTTGGCAGAGTTAATGCGGCTAAGAACATCGAGTATGACGCTGCCTCCTCGTCTTCTTCGCTTGAAGATTCTTCTGGGTCTCTCTACACTCGTTCCATGGAGACGCCGGATCCATCGAGCTTTCGGATTAAAGGGCTTGACGGTGAAGTTGATCTCATATGTCGGACTTTAGGGCTAACGGGTCCTGAAGATTTTGCTATTCCGATGGAGGCTTGGGAGGCCAGAAAAATTCGTTCTTCTTCCGAGCTTCTACCGAAGTCGAGGTTGCACCCTATGGATAGCCCGAAGAGCGAGGAGGTTAATAAGGAGAAGGAAGATAAAGAAATGGAAGATGATTTGTGCCGGAGGGTTAAGGATTCAGTTCGAATTTGCGTCGAGCAATCGACGCCTAAGACAGAATTTCTCGAGTTGACTGAACGCCGTATGGCTACTGCTACCGGATGTAGCTCGAGAAGTGGAATCAATGGTGCTCGGCCTCCCTTACTCAAGCCACCGCCGTCCATGCGGCTTCCGGATTTGGATAATACTTCCTCGACTTGGGACATTTTGAAAGCTTTTGCTCCATTAGTTGAAGATGAAAATCAGGAAGTAGTACAAGAAGGAACTGAACCTTCGGTTGAAGGAGAGGGAGAGGGAAATATTGTCAGGCCTGTGGATAACGCATTGCTCATTGGGTCTTGGGGTTCCTTCACAACCTCGAATGATGATGATTCTTCGAGCAGTACTACGGAGCCTGCAAATATTTCACCCAATATGAGATGTAAACCCATCATTACATCTTGGGCAAGGGGAAGGCGTCTAGGGAGCGGTTCATTTGGATCTGTATACGAAGCAATTTCACAGGATGGGACCTTTTTTGCAGTTAAGGAAGTTTCACTGCTCGACGAAGATAGTCAGGGAAGACAAAGTATCTATCAACTTCAGCAGGAGATAGCTCTTCTCAGTGAGTTTGAGCACGAGAACATAGTTCAGTACTACGGCACGGATACGGAGCAGGATGGGTCAAAACTCTATATCTTCCTTGAGCTTGTATCTCAGGGCTCCCTTATGAGTCTATATCAGAGGATTCACCTTCTGGATTCCATTGTTTCTGCCTATACAAGGCAGATTTTGTTTGGTTTAAAGTATCTTCATGAGCAAAATGTGGTTCACAGGGATATTAAGTGTGCTAATATATTGGTGGATGTGAATGGATCTGTGAAGCTTGCAGATTTTGGTTTGGCGAAGGCAACAAAATCGGACGATGTTAAATCTTGTAAGGGAACTGCATTCTGGATGGCGCCTGAGGTGGTTAATCGGAAGGGCCAGGGATACGGTCTTCCAGCTGATATCTGGAGTCTTGGGTGCACAGTATTGGAAATGTTAACTCGGAAGCTTCCATACTCAGAATTCGAATCTTCTCTGCAGGCTCTATACAATATTGGAAAAGGCAGACCGCCTATGGTTCCCGAGTCTCTCTCAGAAGACGCCCGGGGTTTCGTTCTGCAGTGCCTACAAATTAATCCACACGACCGTCCTACTGCTGCTGATCTTTTAAATCACCCGTTTGTGAAAAGACCAGCTTCCAGTTTATCAGGGTCGGCATCTCCTTACAACAGGCCAGGCAGAAGGATTTAA | 1698 | 46.58 | MHHLPQFFSPRNRRKAMDPRKIAGKPKLGRVNAAKNIEYDAASSSSSLEDSSGSLYTRSMETPDPSSFRIKGLDGEVDLICRTLGLTGPEDFAIPMEAWEARKIRSSSELLPKSRLHPMDSPKSEEVNKEKEDKEMEDDLCRRVKDSVRICVEQSTPKTEFLELTERRMATATGCSSRSGINGARPPLLKPPPSMRLPDLDNTSSTWDILKAFAPLVEDENQEVVQEGTEPSVEGEGEGNIVRPVDNALLIGSWGSFTTSNDDDSSSSTTEPANISPNMRCKPIITSWARGRRLGSGSFGSVYEAISQDGTFFAVKEVSLLDEDSQGRQSIYQLQQEIALLSEFEHENIVQYYGTDTEQDGSKLYIFLELVSQGSLMSLYQRIHLLDSIVSAYTRQILFGLKYLHEQNVVHRDIKCANILVDVNGSVKLADFGLAKATKSDDVKSCKGTAFWMAPEVVNRKGQGYGLPADIWSLGCTVLEMLTRKLPYSEFESSLQALYNIGKGRPPMVPESLSEDARGFVLQCLQINPHDRPTAADLLNHPFVKRPASSLSGSASPYNRPGRRI | 565 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 11645114 | 11651415 | - | Tan0012078.1 | Tan11g1341 | 768278 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g1341 | 565 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 116 | 547 | IPR050538 | - | |
Tan11g1341 | 565 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 409 | 421 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan11g1341 | 565 | ProSitePatterns | Protein kinases ATP-binding region signature. | 294 | 316 | IPR017441 | GO:0005524(InterPro) | |
Tan11g1341 | 565 | FunFam | Mitogen-activated protein kinase 1, putative, expressed | 286 | 556 | - | - | |
Tan11g1341 | 565 | SMART | serkin_6 | 288 | 544 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan11g1341 | 565 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Tan11g1341 | 565 | ProSiteProfiles | Protein kinase domain profile. | 288 | 544 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan11g1341 | 565 | MobiDBLite | consensus disorder prediction | 110 | 134 | - | - | |
Tan11g1341 | 565 | MobiDBLite | consensus disorder prediction | 39 | 64 | - | - | |
Tan11g1341 | 565 | Gene3D | Transferase(Phosphotransferase) domain 1 | 287 | 558 | - | - | |
Tan11g1341 | 565 | MobiDBLite | consensus disorder prediction | 173 | 194 | - | - | |
Tan11g1341 | 565 | SUPERFAMILY | Protein kinase-like (PK-like) | 287 | 547 | IPR011009 | - | |
Tan11g1341 | 565 | Pfam | Protein kinase domain | 290 | 544 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan08g0555 | Tan-Chr8:5391703 | Tan11g1341 | Tan-Chr11:11645114 | 7.80E-54 | dispersed | |
Tan08g2366 | Tan-Chr8:75028267 | Tan11g1341 | Tan-Chr11:11645114 | 1.60E-29 | dispersed | |
Tan09g1114 | Tan-Chr9:63452776 | Tan11g1341 | Tan-Chr11:11645114 | 8.80E-33 | dispersed | |
Tan11g1316 | Tan-Chr11:11361724 | Tan11g1341 | Tan-Chr11:11645114 | 3.50E-24 | dispersed | |
Tan11g1341 | Tan-Chr11:11645114 | Tan01g2353 | Tan-Chr1:28329619 | 1.40E-27 | dispersed | |
Tan11g1341 | Tan-Chr11:11645114 | Tan01g0227 | Tan-Chr1:2023667 | 1.50E-66 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
68211 | PF00069 | Pkinase | 1.80E-66 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g1341 | K13414 | - | csv:101218538 | 935.25 |