Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1341 ATGCATCATCTGCCTCAGTTTTTCTCTCCTAGGAACCGAAGGAAAGCCATGGATCCGAGAAAAATTGCTGGGAAACCCAAGCTTGGCAGAGTTAATGCGGCTAAGAACATCGAGTATGACGCTGCCTCCTCGTCTTCTTCGCTTGAAGATTCTTCTGGGTCTCTCTACACTCGTTCCATGGAGACGCCGGATCCATCGAGCTTTCGGATTAAAGGGCTTGACGGTGAAGTTGATCTCATATGTCGGACTTTAGGGCTAACGGGTCCTGAAGATTTTGCTATTCCGATGGAGGCTTGGGAGGCCAGAAAAATTCGTTCTTCTTCCGAGCTTCTACCGAAGTCGAGGTTGCACCCTATGGATAGCCCGAAGAGCGAGGAGGTTAATAAGGAGAAGGAAGATAAAGAAATGGAAGATGATTTGTGCCGGAGGGTTAAGGATTCAGTTCGAATTTGCGTCGAGCAATCGACGCCTAAGACAGAATTTCTCGAGTTGACTGAACGCCGTATGGCTACTGCTACCGGATGTAGCTCGAGAAGTGGAATCAATGGTGCTCGGCCTCCCTTACTCAAGCCACCGCCGTCCATGCGGCTTCCGGATTTGGATAATACTTCCTCGACTTGGGACATTTTGAAAGCTTTTGCTCCATTAGTTGAAGATGAAAATCAGGAAGTAGTACAAGAAGGAACTGAACCTTCGGTTGAAGGAGAGGGAGAGGGAAATATTGTCAGGCCTGTGGATAACGCATTGCTCATTGGGTCTTGGGGTTCCTTCACAACCTCGAATGATGATGATTCTTCGAGCAGTACTACGGAGCCTGCAAATATTTCACCCAATATGAGATGTAAACCCATCATTACATCTTGGGCAAGGGGAAGGCGTCTAGGGAGCGGTTCATTTGGATCTGTATACGAAGCAATTTCACAGGATGGGACCTTTTTTGCAGTTAAGGAAGTTTCACTGCTCGACGAAGATAGTCAGGGAAGACAAAGTATCTATCAACTTCAGCAGGAGATAGCTCTTCTCAGTGAGTTTGAGCACGAGAACATAGTTCAGTACTACGGCACGGATACGGAGCAGGATGGGTCAAAACTCTATATCTTCCTTGAGCTTGTATCTCAGGGCTCCCTTATGAGTCTATATCAGAGGATTCACCTTCTGGATTCCATTGTTTCTGCCTATACAAGGCAGATTTTGTTTGGTTTAAAGTATCTTCATGAGCAAAATGTGGTTCACAGGGATATTAAGTGTGCTAATATATTGGTGGATGTGAATGGATCTGTGAAGCTTGCAGATTTTGGTTTGGCGAAGGCAACAAAATCGGACGATGTTAAATCTTGTAAGGGAACTGCATTCTGGATGGCGCCTGAGGTGGTTAATCGGAAGGGCCAGGGATACGGTCTTCCAGCTGATATCTGGAGTCTTGGGTGCACAGTATTGGAAATGTTAACTCGGAAGCTTCCATACTCAGAATTCGAATCTTCTCTGCAGGCTCTATACAATATTGGAAAAGGCAGACCGCCTATGGTTCCCGAGTCTCTCTCAGAAGACGCCCGGGGTTTCGTTCTGCAGTGCCTACAAATTAATCCACACGACCGTCCTACTGCTGCTGATCTTTTAAATCACCCGTTTGTGAAAAGACCAGCTTCCAGTTTATCAGGGTCGGCATCTCCTTACAACAGGCCAGGCAGAAGGATTTAA 1698 46.58 MHHLPQFFSPRNRRKAMDPRKIAGKPKLGRVNAAKNIEYDAASSSSSLEDSSGSLYTRSMETPDPSSFRIKGLDGEVDLICRTLGLTGPEDFAIPMEAWEARKIRSSSELLPKSRLHPMDSPKSEEVNKEKEDKEMEDDLCRRVKDSVRICVEQSTPKTEFLELTERRMATATGCSSRSGINGARPPLLKPPPSMRLPDLDNTSSTWDILKAFAPLVEDENQEVVQEGTEPSVEGEGEGNIVRPVDNALLIGSWGSFTTSNDDDSSSSTTEPANISPNMRCKPIITSWARGRRLGSGSFGSVYEAISQDGTFFAVKEVSLLDEDSQGRQSIYQLQQEIALLSEFEHENIVQYYGTDTEQDGSKLYIFLELVSQGSLMSLYQRIHLLDSIVSAYTRQILFGLKYLHEQNVVHRDIKCANILVDVNGSVKLADFGLAKATKSDDVKSCKGTAFWMAPEVVNRKGQGYGLPADIWSLGCTVLEMLTRKLPYSEFESSLQALYNIGKGRPPMVPESLSEDARGFVLQCLQINPHDRPTAADLLNHPFVKRPASSLSGSASPYNRPGRRI 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11645114 11651415 - Tan0012078.1 Tan11g1341 768278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1341 565 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 116 547 IPR050538 -
Tan11g1341 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g1341 565 ProSitePatterns Protein kinases ATP-binding region signature. 294 316 IPR017441 GO:0005524(InterPro)
Tan11g1341 565 FunFam Mitogen-activated protein kinase 1, putative, expressed 286 556 - -
Tan11g1341 565 SMART serkin_6 288 544 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g1341 565 MobiDBLite consensus disorder prediction 1 26 - -
Tan11g1341 565 ProSiteProfiles Protein kinase domain profile. 288 544 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g1341 565 MobiDBLite consensus disorder prediction 110 134 - -
Tan11g1341 565 MobiDBLite consensus disorder prediction 39 64 - -
Tan11g1341 565 Gene3D Transferase(Phosphotransferase) domain 1 287 558 - -
Tan11g1341 565 MobiDBLite consensus disorder prediction 173 194 - -
Tan11g1341 565 SUPERFAMILY Protein kinase-like (PK-like) 287 547 IPR011009 -
Tan11g1341 565 Pfam Protein kinase domain 290 544 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0555 Tan-Chr8:5391703 Tan11g1341 Tan-Chr11:11645114 7.80E-54 dispersed
Tan08g2366 Tan-Chr8:75028267 Tan11g1341 Tan-Chr11:11645114 1.60E-29 dispersed
Tan09g1114 Tan-Chr9:63452776 Tan11g1341 Tan-Chr11:11645114 8.80E-33 dispersed
Tan11g1316 Tan-Chr11:11361724 Tan11g1341 Tan-Chr11:11645114 3.50E-24 dispersed
Tan11g1341 Tan-Chr11:11645114 Tan01g2353 Tan-Chr1:28329619 1.40E-27 dispersed
Tan11g1341 Tan-Chr11:11645114 Tan01g0227 Tan-Chr1:2023667 1.50E-66 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68211 PF00069 Pkinase 1.80E-66 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1341 K13414 - csv:101218538 935.25