Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1358 ATGGGTAGCTCAAGAGACATAGCGATTGGACCAGTGGCTGTTGTTTCTCTCTTGTTGGGAACACTGCTTCAAAAGGAGATTGATTACCATACACATCCAGAAGAGTATCTGCGGCTTGCATTTACAGCTACTTTTTTTGCCGGGATCACCCAAGCCACACTAGGGATCCTAAGGTTGGGTTTTCTGATTGACTTTCTATCTCACGCTGCCATTGTTGGTTTTATGGGTGGAGCTGCCATCACTATTGCCCTTCAACAGCTTAAAGGCTTTCTTGGCATTAAAAAATTCACGAAGAAAACAGACATTATCTCTGTAATGCGCTCAGTATTTGAAGCAGCGCATCATGGATGGAACTGGCAGACTATAGTCCTTGGAGTAGCTTTTCTAAGTTTTCTTCTATTCGCTAAGTATATTGGAAAGAAGAAAAAGAGCCTGTTTTGGGTGCCTGCAATTGCTCCCTTAATATCAGTTATTCTGTCCACCTTCTTTGTTTACATTACCCATGCAGACGAGAAAGGTGTTGCAATTGTAAAACACATAGAGAAAGGAATCAATCCTTCATCAGTGAAGCAAATTTACTTCACTGGCGACAACCTCCTTAAAGGGTTCAGGATTGGCATTGTGGCCGGTATGATAGCATTAACGGAAGCCATAGCAATTGGAAGAACATTTGCTTCCATGAAGGATTACCAGCTTGATGGTAACAAAGAAATGGTGGCACTGGGAACAATGAATGTTATTGGTTCAATGACTTCCTGCTATGTGGCAACAGGCTCGTTCTCTCGCTCAGCTGTGAATTACATGTCTGGCTGCCAAACTGCAGTCTCAAACATTGTTATGTCCTGTGTTGTATTTCTAACTCTAGAGTTCATCACTCCCCTTTTCAAGTACACTCCAAATGCTATTCTCGCTGTCATCATTATCTCTGCTGTGATCAACTTGATTGACATTCCGGCGGCAATTTTGCTTTGGAAAATTGATAAATTTGATTTTGTTGCTTGTTTGGGAGCCTTCTTCGGTGTGATTTTTGCAAGTGTTGAGATAGGTCTCCTAATTGCTGTCTCTATATCATTTGCTAAGATACTCTTACAAGTAACCAGGCCACGAGTTGCAGTACTTGGAAAGATCCCTAGGACGACAGTGTACAGAAACACCCAACAATATCCAGAAGCAATAAGGGTTCCAGGCGTTCTGATTGTCAGAGTTGATTCTGCAATTTACTTTTCTAACTCCAATTACATCAAAGAGAGGATATTGAGATGGTTGGCAGATGAGGAAGAACAAATAAAGAAGGCTTATTCACCGAGAACTCAGTTTTTGATTGTTGAGATGTCTCCTGTTATCGACATTGACACTAGTGGCATTCATGCCTTGGAAGAGCTATACAGGAATCTCCAGAAAAGAGACATTCAGCTTATTCTGGCAAACCCCGGCGCAGTAGTGATCGACAAACTCCACGCGTCCGATGTGGCTAATCTGATTGGTGAGGACCATATCTTTCTAACAGTTGCTGAAGCTGTTTCGTCCTGCTCCCCAAAATTGGTGGAAGAGGCCTAG 1557 42.45 MGSSRDIAIGPVAVVSLLLGTLLQKEIDYHTHPEEYLRLAFTATFFAGITQATLGILRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKKFTKKTDIISVMRSVFEAAHHGWNWQTIVLGVAFLSFLLFAKYIGKKKKSLFWVPAIAPLISVILSTFFVYITHADEKGVAIVKHIEKGINPSSVKQIYFTGDNLLKGFRIGIVAGMIALTEAIAIGRTFASMKDYQLDGNKEMVALGTMNVIGSMTSCYVATGSFSRSAVNYMSGCQTAVSNIVMSCVVFLTLEFITPLFKYTPNAILAVIIISAVINLIDIPAAILLWKIDKFDFVACLGAFFGVIFASVEIGLLIAVSISFAKILLQVTRPRVAVLGKIPRTTVYRNTQQYPEAIRVPGVLIVRVDSAIYFSNSNYIKERILRWLADEEEQIKKAYSPRTQFLIVEMSPVIDIDTSGIHALEELYRNLQKRDIQLILANPGAVVIDKLHASDVANLIGEDHIFLTVAEAVSSCSPKLVEEA 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11899646 11906049 - Tan0000690.1 Tan11g1358 768295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1358 518 Gene3D STAS domain 367 513 IPR036513 -
Tan11g1358 518 FunFam Sulfate transporter 31 367 513 - -
Tan11g1358 518 PANTHER SULFATE TRANSPORTER 1 510 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan11g1358 518 CDD STAS_SulP_like_sulfate_transporter 388 503 - -
Tan11g1358 518 NCBIfam sulfate permease 1 506 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Tan11g1358 518 ProSiteProfiles STAS domain profile. 387 510 IPR002645 -
Tan11g1358 518 Pfam Sulfate permease family 1 335 IPR011547 GO:0016020(InterPro)
Tan11g1358 518 SUPERFAMILY SpoIIaa-like 389 511 IPR036513 -
Tan11g1358 518 Pfam STAS domain 388 506 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g1358 Tan-Chr11:11899646 Tan11g1360 Tan-Chr11:11899646 9.60E-246 dispersed
Tan11g1358 Tan-Chr11:11899646 Tan11g1359 Tan-Chr11:11899646 1.70E-287 tandem
Tan01g3965 Tan-Chr1:104464418 Tan11g1358 Tan-Chr11:11899646 7.40E-235 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1358 K17470 - csv:101212138 946.421