Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1359 ATGGACTCAAGGGACCATTCCAATGGCGGTGAACTTGAAACAAAAGAGATGGGCATTAGAAGTCTTTCATCTTCACGCAACAATACTCAGTACATTCACAAGGTGGGGGTTCCACCAAAGCAAAATCTCCTCAAAGAATTTAAAGCCACAGTGAAAGAGACTTTCTTTGCAGATGATCCTCTGCGAACGTTCAAGGATCAATCAAAGTCCCGAAAGTTGATCCTGGGAATTCAGGCTATCTTCCCAATATTTGAATGGGGAAGGAATTACAATCTGACTAAATTCAGAGGCGATCTGATTGCTGGATTCACTATTGCAAGTCTGTGTATTCCACAGGATATAGGGTATGCAAATCTAGCTAATTTGGCTCCCCAGTATGGATTATACTCCAGCTTTGTACCACCACTGGTTTATGCTTTGATGGGTAGCTCAAGAGACATAGCGATTGGACCAGTGGCTGTTGTTTCTCTCTTGTTGGGAACACTGCTTCAAAAGGAGATTGATTACCATACACATCCAGAAGAGTATCTGCGGCTTGCATTTACAGCTACTTTTTTTGCCGGGATCACCCAAGCCACACTAGGGATCCTAAGGTTGGGTTTTCTGATTGACTTTCTATCTCACGCTGCCATTGTTGGTTTTATGGGTGGAGCTGCCATCACTATTGCCCTTCAACAGCTTAAAGGCTTTCTTGGCATTAAAAAATTCACGAAGAAAACAGACATTATCTCTGTAATGCGCTCAGTATTTGAAGCAGCGCATCATGGATGGAACTGGCAGACTATAGTCCTTGGAGTAGCTTTTCTAAGTTTTCTTCTATTCGCTAAGTATATTGGAAAGAAGAAAAAGAGCCTGTTTTGGGTGCCTGCAATTGCTCCCTTAATATCAGTTATTCTGTCCACCTTCTTTGTTTACATTACCCATGCAGACGAGAAAGGTGTTGCAATTGTAAAACACATAGAGAAAGGAATCAATCCTTCATCAGTGAAGCAAATTTACTTCACTGGCGACAACCTCCTTAAAGGGTTCAGGATTGGCATTGTGGCCGGTATGATAGCATTAACGGAAGCCATAGCAATTGGAAGAACATTTGCTTCCATGAAGGATTACCAGCTTGATGGTAACAAAGAAATGGTGGCACTGGGAACAATGAATGTTATTGGTTCAATGACTTCCTGCTATGTGGCAACAGGCTCGTTCTCTCGCTCAGCTGTGAATTACATGTCTGGCTGCCAAACTGCAGTCTCAAACATTGTTATGTCCTGTGTTGTATTTCTAACTCTAGAGTTCATCACTCCCCTTTTCAAGTACACTCCAAATGCTATTCTCGCTGTCATCATTATCTCTGCTGTGATCAACTTGATTGACATTCCGGCGGCAATTTTGCTTTGGAAAATTGATAAATTTGATTTTGTTGCTTGTTTGGGAGCCTTCTTCGGTGTGATTTTTGCAAGTGTTGAGATAGGTCTCCTAATTGCTGTCTCTATATCATTTGCTAAGATACTCTTACAAGTAACCAGGCCACGAGTTGCAGTACTTGGAAAGATCCCTAGGACGACAGTGTACAGAAACACCCAACAATATCCAGAAGCAATAAGGGTTCCAGGCGTTCTGATTGTCAGAGTTGATTCTGCAATTTACTTTTCTAACTCCAATTACATCAAAGAGAGGATATTGAGATGGTTGGCAGATGAGGAAGAACAAATAAAGAAGGCTTATTCACCGAGAACTCAGTTTTTGATTGTTGAGATGTCTCCTGTTATCGACATTGACACTAGTGGCATTCATGCCTTGGAAGAGCTATACAGGAATCTCCAGAAAAGAGACATTCAGCTTATTCTGGCAAACCCCGGCGCAGTAGTGATCGACAAACTCCACGCGTCCGATGTGGCTAATCTGATTGGTGAGGACCATATCTTTCTAACAGTTGCTGAAGCTGTTTCGTCCTGCTCCCCAAAATTGGTGGAAGAGGCCTAG 1977 42.39 MDSRDHSNGGELETKEMGIRSLSSSRNNTQYIHKVGVPPKQNLLKEFKATVKETFFADDPLRTFKDQSKSRKLILGIQAIFPIFEWGRNYNLTKFRGDLIAGFTIASLCIPQDIGYANLANLAPQYGLYSSFVPPLVYALMGSSRDIAIGPVAVVSLLLGTLLQKEIDYHTHPEEYLRLAFTATFFAGITQATLGILRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKKFTKKTDIISVMRSVFEAAHHGWNWQTIVLGVAFLSFLLFAKYIGKKKKSLFWVPAIAPLISVILSTFFVYITHADEKGVAIVKHIEKGINPSSVKQIYFTGDNLLKGFRIGIVAGMIALTEAIAIGRTFASMKDYQLDGNKEMVALGTMNVIGSMTSCYVATGSFSRSAVNYMSGCQTAVSNIVMSCVVFLTLEFITPLFKYTPNAILAVIIISAVINLIDIPAAILLWKIDKFDFVACLGAFFGVIFASVEIGLLIAVSISFAKILLQVTRPRVAVLGKIPRTTVYRNTQQYPEAIRVPGVLIVRVDSAIYFSNSNYIKERILRWLADEEEQIKKAYSPRTQFLIVEMSPVIDIDTSGIHALEELYRNLQKRDIQLILANPGAVVIDKLHASDVANLIGEDHIFLTVAEAVSSCSPKLVEEA 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11899646 11904316 - Tan0000690.2 Tan11g1359 768296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1359 658 NCBIfam sulfate permease 82 646 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Tan11g1359 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
Tan11g1359 658 Pfam Sulfate permease family 95 475 IPR011547 GO:0016020(InterPro)
Tan11g1359 658 SUPERFAMILY SpoIIaa-like 529 651 IPR036513 -
Tan11g1359 658 Pfam STAS domain 528 646 IPR002645 -
Tan11g1359 658 Gene3D STAS domain 507 653 IPR036513 -
Tan11g1359 658 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Tan11g1359 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Tan11g1359 658 PANTHER SULFATE TRANSPORTER 56 650 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan11g1359 658 FunFam Sulfate transporter 31 507 653 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3965 Tan-Chr1:104464418 Tan11g1359 Tan-Chr11:11899646 2.60E-296 dispersed
Tan02g1254 Tan-Chr2:32892616 Tan11g1359 Tan-Chr11:11899646 4.00E-257 dispersed
Tan02g1255 Tan-Chr2:32981324 Tan11g1359 Tan-Chr11:11899646 6.00E-223 dispersed
Tan06g1013 Tan-Chr6:8941271 Tan11g1359 Tan-Chr11:11899646 2.40E-201 dispersed
Tan10g0797 Tan-Chr10:6672866 Tan11g1359 Tan-Chr11:11899646 2.60E-192 dispersed
Tan11g0773 Tan-Chr11:6506607 Tan11g1359 Tan-Chr11:11899646 5.30E-106 dispersed
Tan11g0774 Tan-Chr11:6506607 Tan11g1359 Tan-Chr11:11899646 3.10E-99 dispersed
Tan11g1359 Tan-Chr11:11899646 Tan11g1361 Tan-Chr11:11961373 5.20E-172 dispersed
Tan11g1358 Tan-Chr11:11899646 Tan11g1359 Tan-Chr11:11899646 1.70E-287 tandem
Tan11g1359 Tan-Chr11:11899646 Tan11g1360 Tan-Chr11:11899646 2.10E-245 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1359 K17470 - csv:101212138 1201.04