Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1360 ATGGGTAGCTCAAGAGACATAGCGATTGGACCAGTGGCTGTTGTTTCTCTCTTGTTGGGAACACTGCTTCAAAAGGAGATTGATTACCATACACATCCAGAAGAGTATCTGCGGCTTGCATTTACAGCTACTTTTTTTGCCGGGATCACCCAAGCCACACTAGGGATCCTAAGGTTGGGTTTTCTGATTGACTTTCTATCTCACGCTGCCATTGTTGGTTTTATGGGTGGAGCTGCCATCACTATTGCCCTTCAACAGCTTAAAGGCTTTCTTGGCATTAAAAAATTCACGAAGAAAACAGACATTATCTCTGTAATGCGCTCAGTATTTGAAGCAGCGCATCATGGATGGAACTGGCAGACTATAGTCCTTGGAGTAGCTTTTCTAAGTTTTCTTCTATTCGCTAAGTATATTGGAAAGAAGAAAAAGAGCCTGTTTTGGGTGCCTGCAATTGCTCCCTTAATATCAGTTATTCTGTCCACCTTCTTTGTTTACATTACCCATGCAGACGAGAAAGGTGTTGCAATTGTAAAACACATAGAGAAAGGAATCAATCCTTCATCAGTGAAGCAAATTTACTTCACTGGCGACAACCTCCTTAAAGGGTTCAGGATTGGCATTGTGGCCGGTATGATAGCATTAACGGAAGCCATAGCAATTGGAAGAACATTTGCTTCCATGAAGGATTACCAGCTTGATGGTAACAAAGAAATGGTGGCACTGGGAACAATGAATGTTATTGGTTCAATGACTTCCTGCTATGTGGCAACAGGCTCGTTCTCTCGCTCAGCTGTGAATTACATGTCTGGCTGCCAAACTGCAGTCTCAAACATTGTTATGTCCTGTGTTGTATTTCTAACTCTAGAGTTCATCACTCCCCTTTTCAAGTACACTCCAAATGCTATTCTCGCTGTCATCATTATCTCTGCTGTGATCAACTTGATTGACATTCCGGCGGCAATTTTGCTTTGGAAAATTGATAAATTTGATTTTGTTGCTTGTTTGGGAGCCTTCTTCGGTGTGATTTTTGCAAGTGTTGAGATAGGTCTCCTAATTGCTGTCTCTATATCATTTGCTAAGATACTCTTACAAGTAACCAGGCCACGAGTTGCAGTACTTGGAAAGATCCCTAGGACGACAGTGTACAGAAACACCCAACAATATCCAGAAGCAATAAGGGTTCCAGGCGTTCTGATTGTCAGAGTTGATTCTGCAATTTACTTTTCTAACTCCAATTACATCAAAGAGAGGATATTGAGATGGTTGGCAGATGAGGAAGAACAAATAAAGAAGGCTTATTCACCGAGAACTCAGTTTTTGATTGTTGAGATGTCTCGTAAGTACTCTCAACCTTTCCAAATATTTTGGAATAATCCTGCACAGTAG 1386 41.34 MGSSRDIAIGPVAVVSLLLGTLLQKEIDYHTHPEEYLRLAFTATFFAGITQATLGILRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKKFTKKTDIISVMRSVFEAAHHGWNWQTIVLGVAFLSFLLFAKYIGKKKKSLFWVPAIAPLISVILSTFFVYITHADEKGVAIVKHIEKGINPSSVKQIYFTGDNLLKGFRIGIVAGMIALTEAIAIGRTFASMKDYQLDGNKEMVALGTMNVIGSMTSCYVATGSFSRSAVNYMSGCQTAVSNIVMSCVVFLTLEFITPLFKYTPNAILAVIIISAVINLIDIPAAILLWKIDKFDFVACLGAFFGVIFASVEIGLLIAVSISFAKILLQVTRPRVAVLGKIPRTTVYRNTQQYPEAIRVPGVLIVRVDSAIYFSNSNYIKERILRWLADEEEQIKKAYSPRTQFLIVEMSRKYSQPFQIFWNNPAQ 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11899646 11906049 - Tan0000690.3 Tan11g1360 768297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1360 461 Gene3D STAS domain 367 447 IPR036513 -
Tan11g1360 461 NCBIfam sulfate permease 1 446 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Tan11g1360 461 Pfam STAS domain 388 445 IPR002645 -
Tan11g1360 461 ProSiteProfiles STAS domain profile. 387 445 IPR002645 -
Tan11g1360 461 PANTHER SULFATE TRANSPORTER 1 446 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan11g1360 461 Pfam Sulfate permease family 1 335 IPR011547 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g1358 Tan-Chr11:11899646 Tan11g1360 Tan-Chr11:11899646 9.60E-246 dispersed
Tan11g1359 Tan-Chr11:11899646 Tan11g1360 Tan-Chr11:11899646 2.10E-245 tandem
Tan11g1360 Tan-Chr11:11899646 Tan11g1361 Tan-Chr11:11961373 1.10E-131 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1360 K17470 - csv:101212138 816.609