Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1361 ATGGGTTCTTTGCCTTCTGAGACTCTGGCCGTCGAAATGACCGACACCCATGTTCTCGCCGGCGCCGGTGCCGGAGCAGAGACCACTGAATGGCTTCTCAATTCTCCCAACCCTCCAACTTTCTGGGAAGGAATTGCCGCCGCTGTCAAAGAAAATGCCATTCCCCGAAGCTGCACGAAGACCCATATGGCAAAGAAGGAGAAGAACAGCACTTCTTTAAGCACAGAAAAACAGAGCATTTTCAAGGCCATTTTTTTCCTTCTGCAGGGAGTGTTCCCAATCCTCAGATTGGGCCGCAGCTACAAAGCTTCTAAGTTCAAAAAGGACCTTATGGCTGGTTTAACACTCGCCAGTCTCAGCATCCCTCAGAGTATTGGGTATGCTAATTTGGCAAAGCTTGATCCTCAATTTGGTCTTTATACAAGTGCTGTTCCTCCTTTAATCTATGCTTTAATGGGGAGCTCGAGAGAGATAGCCATTGGCCCAGTGGCGGTGGTTTCGCTGCTTCTTTCGTCTATGCTTCAAGAAATTCAAGATCCTGTTGCAGACCCAGTTGCTTATAGAAGGCTTGTTTTTACTGTCACCTTCTTTGCAGGGACTTTCCAAGCAGCATTTGGACTTTTGAGATTGGGATTTCTTGTGGATTTTCTTTCTCATGCTGCCATTGTTGGGTTCATGGCTGGTGCAGCCATTCTCATTGGTCTTCAGCAAATGAAAGGCTTACTTGCCATTAGCAACTTCACCACTAAAACTGATGTGGTCTCTGTTTTGGAATCTGTTGTGAGATCTGTTCATCAGCCTTGGTACCCCTTGAACATTGTACTTGGCTGCTCATTTCTGATCTTTCTCCTTGTGGCCAGGTTCATTGGCAGGAGGAAGAAGAAGCTCTTTTGGGTGTCAGCCATTGCTCCTCTCATATCTGTCATTCTCTCCACTTTGATAGTATTTATGTCAAGAGCTGATAGACATGGAGTTAAGATTGTGAAGGAAGTTAAAGAAGGTTTGAACCCAATCTCCATTCATCAGCTGCAACTGAACAGCTCAACTGTTGGCTTAGCTGCCAAAGTTGGCCTCATTGCTGCCCTTATAGCTCTCACAGAAGCGATCGCAGTCGGTCGATCCTTCGCCTCCATTAAAGGCTACAACATTGATGGGAACAAGGAGATGATTGCTATGGGCTTCATGAACATAATAGGCTCTCTAACCTCTTGCTACATAGCCACCGGGTCATTCTCAAGAACGGCTGTGAATTTTAGTGGTGGGTGTGAGAGTGTATTGTCAAATATAGTGATGGCAATAACAGTGATGCTGACACTACAATTTTTCACTCGATTTCTTTACTTCACTCCAATGGCCATTTTGGCTTCAATCATTCTCTCTGCTCTTCCTGGTCTCATTGACATCAATGAGGCTTTGCATATCTGGAAGGTTGACAAGCTTGACTTTCTTGCCTCTCTTGGCGCTTTCCTTGGTGTCTTGTTTCATTCAGTGGAATTTGGCCTTCTTCTAGCGGTTGGAATTTCATTTGCAAAGATATTGTTGATTTCAATCAGACCAGCCACAGAAGAGGTGGGAAGGCTTCCAAGAAGTGATATTTTTTGCAACATGAAGCAATTCCCCATGGCCATGAAAACTCAAGGAATCTCCATTTTCAGAATAAACTCTGCCTTGCTTTGTTTTGCCAATGCCAGTTTCATTAGGGACAGGATAATGAAATTGGTAGAAGAAGATGAAGATGATGATATTGAAGATCTAACCACAAAAGATAATCAACCTAAACAAGTAGTAGTTGACATGTGCAACGTTATGAATATCGACACATCAGGAATCATTGTCTTAGAGGAACTTCACAAAAGATTATTGTTGCATGGCATACAACTAACAATAGCCAGTCCAAAATGGGAAGTGATCCACAAACTTAAAAAAACAAATTTTGTTGAGAGAATTGAAGGAAGGGTTTTTCTATCAGTTGGTGAAGCTGTGGATTCATGCCTTGGAAATGCATCCAAATTGCCTTAA 2019 43.39 MGSLPSETLAVEMTDTHVLAGAGAGAETTEWLLNSPNPPTFWEGIAAAVKENAIPRSCTKTHMAKKEKNSTSLSTEKQSIFKAIFFLLQGVFPILRLGRSYKASKFKKDLMAGLTLASLSIPQSIGYANLAKLDPQFGLYTSAVPPLIYALMGSSREIAIGPVAVVSLLLSSMLQEIQDPVADPVAYRRLVFTVTFFAGTFQAAFGLLRLGFLVDFLSHAAIVGFMAGAAILIGLQQMKGLLAISNFTTKTDVVSVLESVVRSVHQPWYPLNIVLGCSFLIFLLVARFIGRRKKKLFWVSAIAPLISVILSTLIVFMSRADRHGVKIVKEVKEGLNPISIHQLQLNSSTVGLAAKVGLIAALIALTEAIAVGRSFASIKGYNIDGNKEMIAMGFMNIIGSLTSCYIATGSFSRTAVNFSGGCESVLSNIVMAITVMLTLQFFTRFLYFTPMAILASIILSALPGLIDINEALHIWKVDKLDFLASLGAFLGVLFHSVEFGLLLAVGISFAKILLISIRPATEEVGRLPRSDIFCNMKQFPMAMKTQGISIFRINSALLCFANASFIRDRIMKLVEEDEDDDIEDLTTKDNQPKQVVVDMCNVMNIDTSGIIVLEELHKRLLLHGIQLTIASPKWEVIHKLKKTNFVERIEGRVFLSVGEAVDSCLGNASKLP 672
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11961373 11969773 + Tan0016528.1 Tan11g1361 768298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1361 672 Pfam Sulfate permease family 106 485 IPR011547 GO:0016020(InterPro)
Tan11g1361 672 SUPERFAMILY SpoIIaa-like 544 664 IPR036513 -
Tan11g1361 672 ProSitePatterns SLC26A transporters signature. 135 156 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Tan11g1361 672 ProSiteProfiles STAS domain profile. 558 664 IPR002645 -
Tan11g1361 672 Gene3D STAS domain 518 667 IPR036513 -
Tan11g1361 672 PANTHER SULFATE TRANSPORTER 72 665 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan11g1361 672 NCBIfam sulfate permease 93 657 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Tan11g1361 672 Pfam STAS domain 541 660 IPR002645 -
Tan11g1361 672 CDD STAS_SulP_like_sulfate_transporter 539 655 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1356 Tan-Chr1:13232594 Tan11g1361 Tan-Chr11:11961373 1.80E-220 dispersed
Tan11g1359 Tan-Chr11:11899646 Tan11g1361 Tan-Chr11:11961373 5.20E-172 dispersed
Tan11g1360 Tan-Chr11:11899646 Tan11g1361 Tan-Chr11:11961373 1.10E-131 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1361 K17469 - csv:101211892 1077.39