Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1400 ATGAAGATGAAGATGAAGATGAAGAGGGAGCTTGAGGATGATGGATCTAGAGGTGGAGGCGGCGGCGGGAGGGGGGTTGTGAGAGGGGAGTGTTCTTCAATGTCGACTGGGAAAATGAAGATGTGGGAGGAGGAGCAAGACGGCGGAGGAATGGATGAGTTGCTTGCTGTTTTGGGCTACAAGGTTCGAGCGTCGGACATGGCGGATGTGGCGCAGAAGCTGGAGCAGCTGGAGATGGTGATGGGAACTGCTCAGGAAGATGGGATTTCTCATTTGGCTTCTGATACTGTTCATTATAATCCTTCTGATCTTTCTGCTTGGGTTCAAAATATGCTCTCTGAATTCAACTCTCCTCCTCCTTCTCAATCTTCTCAATACCCCAATTCTCACCCACAGATTCAATCCACGACTTCGCGTTTGTACAACGACGATTCTGAGTACGATCTTAGCGCCATTCCCGGCGTCGCGGTTTTACCTCCCAAACATTCCTTAACTGAAATCGAAACCAATTCTCACAAGCGCCTCAAAATTGAAGGGGAGATTTCCGTGAATTGGTTGCCGCCGTTCGTTGCGGCGGCGGCTGGGAGTGTTGTCTCTGAACCTTCTCGTCCGGTGGTGGTTGTGGAAGAGGGTTCGCAAGAGACGGGGATTCAACTCGTTCACACTCTAATGGCCTGCGCCGAAGCCGTGCAGCAAGAGAATATGAAGCTCGCCGAGGCGTTGGTGAAGCATATCGGATTACTGGCGGCGGCGCAAGCCGGAGCGATGAGGAAAGTCGCGACGTATTTCGCCGAAGCCCTAGCGCGTCGGATTTACAGAATCTACTCTCCTCAAGACGGACTTTACTCTTCCTACTCTGATCTCCTCCAGATGCACTTTTACGAGACCTGTCCGTATCTGAAATTCGCGCATTTCACTGCCAATCAAGCCATTCTCGAAGCGTTCGCGACGGCGGCGAGAGTTCATGTTATCGATTTCAGTCTCAATCAAGGTATGCAGTGGCCGGCGCTGATGCAGGCGCTCGCATTACGTTCTGGAGGTCCGCCGGCGTTTCGATTGACCGGAATCGGCCCGCCGCAGCCGGGTAATACGGCTGATTCGTTGCAGCAAGTCGGTTGGAAGTTAGCGCAGATGGCGGAAGCCATTGGTGTGGAGTTCGAGTTCAATCACATCGTGTGTAGCAATCTGGCAGATCTCGATCCGGAGGCTCTGGAGATTCGGCCGGCGGCGGTGGAGGCGGTGGCGGTGAACTCGGTGTTTGATCTCCACCGGTTGTTGGCTCGGCCTGGAGCGATCGAGAAGGTTTTGGGATCGATAAAGACGACGAAGCCGAAGATTGTGACGATTGTGGAACAGGAAGCGAACCACAACGGGCCGGTTTTCCTTGACCGGTTCACCGAGGCGTTGCATTATTACTCGAACCTATTTGACTCGCTCGAGGGATCTTCGACCGGGTTCGAACCGGCGAGTGAGGACGTGTTGTTGTCGGAGGTTTATTTGGGGAGGCAGATTTGTAATGTGGTGGCTTGTGAAGGAATGGACCGAGTCGAGCGGCACGAGTCATTGACTCAGTGGCGAACTCGGATGGAATCGGCCGGGTTCGACCCGGTTCATCTCGGTTCCAACGCGTTCAAGCAGGCTAGCATGCTTTTGGCCCTCTTTGCTGGCGGAGAAGGGTACAGGGTGGAAGAGAATAATGGGTGTTTAATGCTTGGCTGGCACACTCGACCGTTGATTGCCACGTCAGCTTGGCAACTCGCTGCCGATGAGTCAAAGTGA 1779 53.74 MKMKMKMKRELEDDGSRGGGGGGRGVVRGECSSMSTGKMKMWEEEQDGGGMDELLAVLGYKVRASDMADVAQKLEQLEMVMGTAQEDGISHLASDTVHYNPSDLSAWVQNMLSEFNSPPPSQSSQYPNSHPQIQSTTSRLYNDDSEYDLSAIPGVAVLPPKHSLTEIETNSHKRLKIEGEISVNWLPPFVAAAAGSVVSEPSRPVVVVEEGSQETGIQLVHTLMACAEAVQQENMKLAEALVKHIGLLAAAQAGAMRKVATYFAEALARRIYRIYSPQDGLYSSYSDLLQMHFYETCPYLKFAHFTANQAILEAFATAARVHVIDFSLNQGMQWPALMQALALRSGGPPAFRLTGIGPPQPGNTADSLQQVGWKLAQMAEAIGVEFEFNHIVCSNLADLDPEALEIRPAAVEAVAVNSVFDLHRLLARPGAIEKVLGSIKTTKPKIVTIVEQEANHNGPVFLDRFTEALHYYSNLFDSLEGSSTGFEPASEDVLLSEVYLGRQICNVVACEGMDRVERHESLTQWRTRMESAGFDPVHLGSNAFKQASMLLALFAGGEGYRVEENNGCLMLGWHTRPLIATSAWQLAADESK 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12468463 12470816 - Tan0008439.1 Tan11g1400 768337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1400 592 Gene3D - 50 115 IPR038088 -
Tan11g1400 592 MobiDBLite consensus disorder prediction 113 136 - -
Tan11g1400 592 MobiDBLite consensus disorder prediction 1 17 - -
Tan11g1400 592 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 180 584 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0009723(PANTHER)|GO:0009737(PANTHER)|GO:0009863(PANTHER)|GO:0009867(PANTHER)|GO:0009938(PANTHER)|GO:0010187(PANTHER)|GO:0042538(PANTHER)|GO:0043565(PANTHER)|GO:2000033(PANTHER)|GO:2000377(PANTHER)
Tan11g1400 592 Coils Coil 67 87 - -
Tan11g1400 592 Pfam Transcriptional regulator DELLA protein N terminal 52 119 IPR021914 -
Tan11g1400 592 MobiDBLite consensus disorder prediction 1 35 - -
Tan11g1400 592 Pfam GRAS domain family 219 585 IPR005202 -
Tan11g1400 592 ProSiteProfiles GRAS family profile. 210 585 IPR005202 -
Tan11g1400 592 SMART DELLA_2 52 125 - -
Tan11g1400 592 FunFam DELLA protein GAI 50 115 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1972 Tan-Chr3:74808985 Tan11g1400 Tan-Chr11:12468463 5.50E-51 dispersed
Tan04g2033 Tan-Chr4:73062542 Tan11g1400 Tan-Chr11:12468463 2.80E-183 dispersed
Tan11g0122 Tan-Chr11:1245175 Tan11g1400 Tan-Chr11:12468463 2.00E-83 dispersed
Tan11g1300 Tan-Chr11:11146974 Tan11g1400 Tan-Chr11:12468463 5.80E-41 dispersed
Tan11g1400 Tan-Chr11:12468463 Tan11g1747 Tan-Chr11:17753713 3.10E-200 dispersed
Tan11g1400 Tan-Chr11:12468463 Tan08g2009 Tan-Chr8:72165090 8.90E-46 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28742 PF03514 GRAS 5.70E-136 CL0063 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1400 K14494 - csv:101213911 952.584