Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1421 ATGGAGAAGAACCAACCTGAGAATCAACACATTCTTCAGAAGACTTCTAGCTTCACCGCCAAGGACGACGCCCCCAAATTGACCGCTGATGATAATCCCAATCTCCCCGTTCCAGATCCTGATGCTGCTGCAGTTGCTGTTCCTGTAGACACCGACGCCGATGTAAAATCTGCTGAGAAATTGGAGGATAATCAGGACAAGGATCAGGATCAGGATCAGGAGAAGAAGGAGAAGGAGGAGAAGGAGGAGGAGGAGAAGGAGAAGGAGAAGGAGGAGGAGAAAGAGGAAGAGAAAGAGGAGGAGGAGGAGGAAAAGAAGGAGGAAGAGTCGAAGGATGAACCTTATCTTCATTATGATCTCCAGACGATTCTTCAAGATGTCGATCAATTTCTGTTAACTCCTCACGGTTCTCGTGATCGAGAGGAGGATTCTGCTGTGGAGATTCCGAAGTTCATTGACAGGTTCATGGATCTCTTGGATGCGAAGATTGATCAATACGAGAATGCGGAATCGAATGCGAAAGAGAAAGAGAATCGAGTGCCGGAGGACGAATCTACGTTTCTTGAAGCGGTTGATCGGATATCGAAGCTGAAAAGTGCAATCCACGAAATGAAATTGGAAGAGGAGAAGAGTTCGTTGATCAATCGCATCGGAAGCACTCAACTACGTGCAATTTCTTATTTGGAAGAAGAGTTCAGGTTCCTTCTCGAGGAGTCCAGAAATGGCGATTCGGATCCTGCTTCCGATGCTGAATCCGATCAACTCTATTTTCCAGGTTACTCCGATGAGATCGTGAGCCATTTGAACAAAATCGCCAACCAAATGATTGCCGGTGGATTCGAATCGGAATGTTGCCAAGTTTACATCGTCGCGAGAAGAAACATATTCGAAGAGGCCTTGCAGAAGCTCGGATTCGAGAAACACAGCATCGATGATATCCAGAAGATGAGTTGGGAATCAATGGAGAGGGAGATCGCTACGTGGATTAAAACCTTCAAGCAATGCGCCACCGTTTTGTTCCCCGGCGAACGGAAACTCGTCGAATCTGTATTTTCATCGTATATTCCAATCTCCGCCAGTCTGTTTAGCAACCTAACTCGCGGCATTGTGATTCAACTGCTAAATTTCTCAGAAGGAGTCGCAATGACGAAACGCTCCGCCGAGAAATTGTTCAAGCTGCTCGACATGTACGAAGCTCTTCGCGATATGGTCCCAAAAATGGAATGCTTATTTCCAGAAGAATCCGCCAACGAACTCAAAACAGAGACCACAACCGCTCGAACTCGTCTAGGGGAAGCCGCGATTTGCATATTTTGCGATCTCGAAAACTCGATCAAAGCGGACACCGGAAAAACTCCTGTACCAGGCGGCGCCGTTCATCCATTGACTCGATACACCATAAACTACTTGAAATACGCTTGCGAGTACAGAAACACACTGGAACAGATTTTCAAAGAACACTCAAAGATCGAGCGAGCCGATTCCACAAGCCGACCACATTTCGAAGGCGAACAAGCACCGAATTACAACCAACCTAGCGGCGGTGACAATCAATCACCATTCTCGGTGGAACTGACGAGGGTAATGGAGCTCCTGGACTCAAATCTGGAAGCAAAATCAAAGCTATACAGAGACATAGCACTGAGTTCAATTTTCATGATGAACAACGGGCGTTACATCTTGCAGAAAATCAAAGGATCTGCAGAGATTCACGAACTGGTAGGCGATACTTGGTACAGAAAGAGATCTTCGGATCTCCGTCAGTACCACAAGAATTACCAGAGAGAAACGTGGGGAAGATTGTTGGGTTGTTTGAACCACGAGGGATTGACAGTGCACGGGAAAGTGGCAAAGCCAGTGCTGAAGGAGAGGTTTAAAGGATTCAACGCCCTGTTCGAAGAGATTCATAAGACGCAAAGCTCGTGGATCATAAGCGACGAGCAGCTTCAATCGGAGCTCCGAGTATCGATATCGGCAGTGATGATTCCGGCGTACAGATCATTCCTAGCTAGGTTTTCACAGTACTTGGATCCGGGGAGACAAACAGAGAAATACATTAAACTTCAACCTGAAGACATAGAAACCTACATAGATGATCTATTCGATGGAAATCCATCCTCCATGGCAAGAAAGAGAACATAA 2142 46.45 MEKNQPENQHILQKTSSFTAKDDAPKLTADDNPNLPVPDPDAAAVAVPVDTDADVKSAEKLEDNQDKDQDQDQEKKEKEEKEEEEKEKEKEEEKEEEKEEEEEEKKEEESKDEPYLHYDLQTILQDVDQFLLTPHGSRDREEDSAVEIPKFIDRFMDLLDAKIDQYENAESNAKEKENRVPEDESTFLEAVDRISKLKSAIHEMKLEEEKSSLINRIGSTQLRAISYLEEEFRFLLEESRNGDSDPASDAESDQLYFPGYSDEIVSHLNKIANQMIAGGFESECCQVYIVARRNIFEEALQKLGFEKHSIDDIQKMSWESMEREIATWIKTFKQCATVLFPGERKLVESVFSSYIPISASLFSNLTRGIVIQLLNFSEGVAMTKRSAEKLFKLLDMYEALRDMVPKMECLFPEESANELKTETTTARTRLGEAAICIFCDLENSIKADTGKTPVPGGAVHPLTRYTINYLKYACEYRNTLEQIFKEHSKIERADSTSRPHFEGEQAPNYNQPSGGDNQSPFSVELTRVMELLDSNLEAKSKLYRDIALSSIFMMNNGRYILQKIKGSAEIHELVGDTWYRKRSSDLRQYHKNYQRETWGRLLGCLNHEGLTVHGKVAKPVLKERFKGFNALFEEIHKTQSSWIISDEQLQSELRVSISAVMIPAYRSFLARFSQYLDPGRQTEKYIKLQPEDIETYIDDLFDGNPSSMARKRT 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12798608 12801043 + Tan0021791.1 Tan11g1421 768358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1421 713 PANTHER EXOCYST COMPLEX PROTEIN EXO70 96 704 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Tan11g1421 713 MobiDBLite consensus disorder prediction 491 520 - -
Tan11g1421 713 Coils Coil 152 186 - -
Tan11g1421 713 MobiDBLite consensus disorder prediction 53 93 - -
Tan11g1421 713 SUPERFAMILY Cullin repeat-like 181 702 IPR016159 -
Tan11g1421 713 MobiDBLite consensus disorder prediction 94 108 - -
Tan11g1421 713 MobiDBLite consensus disorder prediction 1 116 - -
Tan11g1421 713 Pfam Exo70 exocyst complex subunit C-terminal 327 699 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Tan11g1421 713 Pfam Exocyst complex component Exo70 N-terminal 156 238 - -
Tan11g1421 713 MobiDBLite consensus disorder prediction 501 520 - -
Tan11g1421 713 Coils Coil 58 113 - -
Tan11g1421 713 Gene3D Exocyst complex component Exo70 122 711 - -
Tan11g1421 713 MobiDBLite consensus disorder prediction 8 22 - -
Tan11g1421 713 FunFam Exocyst subunit Exo70 family protein 170 709 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2961 Tan-Chr5:81690153 Tan11g1421 Tan-Chr11:12798608 5.90E-91 dispersed
Tan10g1341 Tan-Chr10:16134711 Tan11g1421 Tan-Chr11:12798608 3.00E-167 dispersed
Tan11g1421 Tan-Chr11:12798608 Tan04g2072 Tan-Chr4:74948413 1.70E-06 dispersed
Tan11g1421 Tan-Chr11:12798608 Tan09g2370 Tan-Chr9:73415933 3.70E-91 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1421 K07195 - csv:101206040 1082.01