Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g1445 | ATGTCTAAATTAGAGGAGGTAATAATTTTGGATTGTATCCTAAGTCCATTTTGCACAAGGGTTAAGATTGCTTTGAATGAGAAGGGAGTGAGTTATGAGAGTAGAGAAGAGGATTTGTTTGGTTGGAAAGGTGGGAAAAGTGAGTTGTTGCTCAAATCTAACCCTATTTATAAGAAAGTGCCTGTTCTTTTGCATAATGGTAAGCCATTGAATGAAAGCTCCATTATTGTCAACTATATTGAGGAGGCTTGGCCTTCTTCTTCCCCTCTTCTTCCTTCTTCTCCATATGAAAGAGCTCAAGCTCGGTTTTGGATCGACTACATCGACAAAAAGGTATTCGAGGTGGGTGGGAAGATTTGGAGGAGCAATGGAGAAGAGCAAGAGGCAGCGAAGAAGGAGTTCATAGAGATTTTGAAGACATTGGAGGAAGCTTTAGGGGAAAAAGATTTCTTTGGAGGAGAAAGCTTTGGAATTGTGGATGTGATTGCAATCCCATTCACAAGTTGGTTCTATGCTTTTGAGAAAGTTGGAAACTTCAAAGTGGAACAACATTGCCCAAAATTCTCAGCTTGGGAAAAGAGATGCTTGCTAAAGGAGACTGTTGCTAGTGTCATCCCTAGCCCTCATAAGGTCTATGAGTTTGTCAACTCCATGAGAAAGAACTTAGGGCTTCAATAG | 678 | 40.71 | MSKLEEVIILDCILSPFCTRVKIALNEKGVSYESREEDLFGWKGGKSELLLKSNPIYKKVPVLLHNGKPLNESSIIVNYIEEAWPSSSPLLPSSPYERAQARFWIDYIDKKVFEVGGKIWRSNGEEQEAAKKEFIEILKTLEEALGEKDFFGGESFGIVDVIAIPFTSWFYAFEKVGNFKVEQHCPKFSAWEKRCLLKETVASVIPSPHKVYEFVNSMRKNLGLQ | 225 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 12988347 | 12989679 | + | Tan0019545.1 | Tan11g1445 | 768382 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g1445 | 225 | Pfam | Glutathione S-transferase, N-terminal domain | 14 | 85 | IPR004045 | - | |
Tan11g1445 | 225 | Gene3D | - | 94 | 225 | - | - | |
Tan11g1445 | 225 | CDD | GST_C_Tau | 96 | 218 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
Tan11g1445 | 225 | Gene3D | Glutaredoxin | 3 | 93 | - | - | |
Tan11g1445 | 225 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 6 | 216 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
Tan11g1445 | 225 | FunFam | Glutathione S-transferase U20 | 94 | 225 | - | - | |
Tan11g1445 | 225 | Pfam | Glutathione S-transferase, C-terminal domain | 123 | 195 | IPR004046 | - | |
Tan11g1445 | 225 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 94 | 214 | IPR010987 | - | |
Tan11g1445 | 225 | FunFam | Tau class glutathione S-transferase | 1 | 93 | - | - | |
Tan11g1445 | 225 | SFLD | Glutathione Transferase (cytosolic) | 5 | 222 | IPR040079 | - | |
Tan11g1445 | 225 | SUPERFAMILY | Thioredoxin-like | 13 | 112 | IPR036249 | - | |
Tan11g1445 | 225 | SUPERFAMILY | GST C-terminal domain-like | 82 | 221 | IPR036282 | - | |
Tan11g1445 | 225 | CDD | GST_N_Tau | 7 | 84 | - | - | |
Tan11g1445 | 225 | SFLD | Main.3: Omega- and Tau-like | 5 | 222 | IPR045073 | - | |
Tan11g1445 | 225 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 5 | 88 | IPR004045 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g0952 | Tan-Chr1:9194078 | Tan11g1445 | Tan-Chr11:12988347 | 2.40E-65 | dispersed | |
Tan10g0600 | Tan-Chr10:4880767 | Tan11g1445 | Tan-Chr11:12988347 | 6.00E-35 | dispersed | |
Tan10g0601 | Tan-Chr10:4887281 | Tan11g1445 | Tan-Chr11:12988347 | 1.90E-35 | dispersed | |
Tan11g1445 | Tan-Chr11:12988347 | Tan04g1084 | Tan-Chr4:9721737 | 1.00E-34 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g1445 | K00799 | - | csv:101213628 | 390.963 |