Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1445 ATGTCTAAATTAGAGGAGGTAATAATTTTGGATTGTATCCTAAGTCCATTTTGCACAAGGGTTAAGATTGCTTTGAATGAGAAGGGAGTGAGTTATGAGAGTAGAGAAGAGGATTTGTTTGGTTGGAAAGGTGGGAAAAGTGAGTTGTTGCTCAAATCTAACCCTATTTATAAGAAAGTGCCTGTTCTTTTGCATAATGGTAAGCCATTGAATGAAAGCTCCATTATTGTCAACTATATTGAGGAGGCTTGGCCTTCTTCTTCCCCTCTTCTTCCTTCTTCTCCATATGAAAGAGCTCAAGCTCGGTTTTGGATCGACTACATCGACAAAAAGGTATTCGAGGTGGGTGGGAAGATTTGGAGGAGCAATGGAGAAGAGCAAGAGGCAGCGAAGAAGGAGTTCATAGAGATTTTGAAGACATTGGAGGAAGCTTTAGGGGAAAAAGATTTCTTTGGAGGAGAAAGCTTTGGAATTGTGGATGTGATTGCAATCCCATTCACAAGTTGGTTCTATGCTTTTGAGAAAGTTGGAAACTTCAAAGTGGAACAACATTGCCCAAAATTCTCAGCTTGGGAAAAGAGATGCTTGCTAAAGGAGACTGTTGCTAGTGTCATCCCTAGCCCTCATAAGGTCTATGAGTTTGTCAACTCCATGAGAAAGAACTTAGGGCTTCAATAG 678 40.71 MSKLEEVIILDCILSPFCTRVKIALNEKGVSYESREEDLFGWKGGKSELLLKSNPIYKKVPVLLHNGKPLNESSIIVNYIEEAWPSSSPLLPSSPYERAQARFWIDYIDKKVFEVGGKIWRSNGEEQEAAKKEFIEILKTLEEALGEKDFFGGESFGIVDVIAIPFTSWFYAFEKVGNFKVEQHCPKFSAWEKRCLLKETVASVIPSPHKVYEFVNSMRKNLGLQ 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12988347 12989679 + Tan0019545.1 Tan11g1445 768382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1445 225 Pfam Glutathione S-transferase, N-terminal domain 14 85 IPR004045 -
Tan11g1445 225 Gene3D - 94 225 - -
Tan11g1445 225 CDD GST_C_Tau 96 218 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Tan11g1445 225 Gene3D Glutaredoxin 3 93 - -
Tan11g1445 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 216 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Tan11g1445 225 FunFam Glutathione S-transferase U20 94 225 - -
Tan11g1445 225 Pfam Glutathione S-transferase, C-terminal domain 123 195 IPR004046 -
Tan11g1445 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 94 214 IPR010987 -
Tan11g1445 225 FunFam Tau class glutathione S-transferase 1 93 - -
Tan11g1445 225 SFLD Glutathione Transferase (cytosolic) 5 222 IPR040079 -
Tan11g1445 225 SUPERFAMILY Thioredoxin-like 13 112 IPR036249 -
Tan11g1445 225 SUPERFAMILY GST C-terminal domain-like 82 221 IPR036282 -
Tan11g1445 225 CDD GST_N_Tau 7 84 - -
Tan11g1445 225 SFLD Main.3: Omega- and Tau-like 5 222 IPR045073 -
Tan11g1445 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 88 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0952 Tan-Chr1:9194078 Tan11g1445 Tan-Chr11:12988347 2.40E-65 dispersed
Tan10g0600 Tan-Chr10:4880767 Tan11g1445 Tan-Chr11:12988347 6.00E-35 dispersed
Tan10g0601 Tan-Chr10:4887281 Tan11g1445 Tan-Chr11:12988347 1.90E-35 dispersed
Tan11g1445 Tan-Chr11:12988347 Tan04g1084 Tan-Chr4:9721737 1.00E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1445 K00799 - csv:101213628 390.963