Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g1469 | ATGGTGGCACATGCCTGCTGTCAAATCAATGGGAGAATGGACGGTGAGGATGAAAAGACTCATAGGGGAAAGCTTGATATGAAGCTTTCAACATCAGGGTTTGGTCAGCAGGATCACGAAGGAGGGGAAAAGAAATGCTTGAATTCAGAGCTATGGCATGCATGCGCGGGGCCCCTTGTGTCCCTTCCAACTGCTGGGACTCGGGTTGTCTACTTCCCTCAGGGTCACAGCGAACAGGTTGCTGCCACGACCAACAAAGAAGTTGATGGGCATATACCAAATTACCCGAACCTACCTCCCCAGTTGATATGTCAACTTCACAACGTTACAATGCATGCAGACGTGGAAACGGATGAAGTATATGCTCAAATGACATTACAGCCGCTGACTGCACAAGAGCAAAAGGATACATTTCTACCCATGGAATTGGGGATTCCAAGTAGACAGCCAACAAATTACTTTTGCAAGACGTTGACAGCAAGTGATACAAGCACCCATGGAGGATTCTCTGTACCTCGTCGTGCTGCTGAGAAAGTTTTTCCTCCGCTGGATTTTTCACAACAGCCACCGGCACAAGAGCTGATTGCAAGGGACCTTCATGACGTTGAATGGAAGTTTAGGCATATTTTTCGCGGTTGGGAGGATGTCTTATTTTCCCTCCTTGTACTCTTTCGTTAA | 678 | 47.35 | MVAHACCQINGRMDGEDEKTHRGKLDMKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGWEDVLFSLLVLFR | 225 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 13381373 | 13399268 | + | Tan0014131.1 | Tan11g1469 | 768406 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g1469 | 225 | Pfam | B3 DNA binding domain | 154 | 212 | IPR003340 | GO:0003677(InterPro) | |
Tan11g1469 | 225 | CDD | B3_DNA | 153 | 215 | IPR003340 | GO:0003677(InterPro) | |
Tan11g1469 | 225 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 46 | 212 | IPR044835 | GO:0003677(InterPro)|GO:0006355(InterPro)|GO:0009725(InterPro) | |
Tan11g1469 | 225 | SUPERFAMILY | DNA-binding pseudobarrel domain | 138 | 213 | IPR015300 | - | |
Tan11g1469 | 225 | Gene3D | - | 152 | 219 | IPR015300 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan11g1469 | Tan-Chr11:13381373 | Tan11g2197 | Tan-Chr11:59274760 | 1.80E-47 | dispersed | |
Tan11g1469 | Tan-Chr11:13381373 | Tan03g2736 | Tan-Chr3:80297074 | 1.20E-91 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g1469 | K14486 | - | csv:101208098 | 390.578 |