Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1474 ATGATGATGAACCCCATCCCGGTTCACCACGTTAACCGGTTCGCCGCCTCCGCTAATTCTTCGCCGGATCTCGCCGCCGCCGTTCCCGGCTTCGGAGTTCATCGCAAGAAGAGGATGGCTAGACAGCGCCGCTCTTCTTCTAATCTTCATTTCTCCTTTCCTTCTTCTTCTTCTTCTTCAAATTCTTCTTCCTCCGCCCACCTCCTCCCTTCCCCACGGGTAATTGATCTAAGGAGGCTGAAGTTTCTTTTTCAGAAGGAGCTGAAAAACAGTGATGTTAGCTCTCTGAGGAGAATGATACTCCCAAAGAAAGCAGCTGAAACTCACCTCCCAGCTTTAGAGTCTAAAGAAGGGATCATCATCACCATGGATGACTTGGATGGGGTGCATGTTTGGAACTTTAAATACAGGTTTTGGCCAAATAACAATAGTAGAATGTATGTACTTGAAAATACTGGGGACTTTGTCAATGCCCATGGCTTACAACTAGGAGATTTCATCATGGTTTACCAAGATTTTGAAGATCACAATTATGTCATTCAAGCAAAAAAGGCTTCCGATCAAGAACTATATTCCGACATAGCAAGCAACGTCGTGATCAACGACGACATTGCCTTTCAAGACTACGATGCTAGCAAAGCTGCCAGCTCCATATACGTGCCTAGTCCAACCATGGACGATCCCGTGTCGTCGTTCATCTACGACACCAGTTCTGCCTTCGACAACGATTCACCCTTCGACTTTATGAGTGGCTCAATGACCAACTACTCGAGAATGGGAGCTCTCGAAGGCTTTGGATCGGTCGAGAACTTGTCCCTCGACGACTTCTACTAA 834 46.76 MMMNPIPVHHVNRFAASANSSPDLAAAVPGFGVHRKKRMARQRRSSSNLHFSFPSSSSSSNSSSSAHLLPSPRVIDLRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPALESKEGIIITMDDLDGVHVWNFKYRFWPNNNSRMYVLENTGDFVNAHGLQLGDFIMVYQDFEDHNYVIQAKKASDQELYSDIASNVVINDDIAFQDYDASKAASSIYVPSPTMDDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGALEGFGSVENLSLDDFY 277
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 13450125 13453874 + Tan0008299.1 Tan11g1474 768411
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1474 277 ProSiteProfiles B3 DNA-binding domain profile. 84 186 IPR003340 GO:0003677(InterPro)
Tan11g1474 277 CDD B3_DNA 82 184 IPR003340 GO:0003677(InterPro)
Tan11g1474 277 SMART B3_2 84 186 IPR003340 GO:0003677(InterPro)
Tan11g1474 277 Pfam B3 DNA binding domain 84 183 IPR003340 GO:0003677(InterPro)
Tan11g1474 277 SUPERFAMILY DNA-binding pseudobarrel domain 82 180 IPR015300 -
Tan11g1474 277 MobiDBLite consensus disorder prediction 43 68 - -
Tan11g1474 277 FunFam B3 domain-containing transcription factor FUS3 80 194 - -
Tan11g1474 277 Gene3D - 80 197 IPR015300 -
Tan11g1474 277 MobiDBLite consensus disorder prediction 45 68 - -
Tan11g1474 277 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 35 191 IPR044800 GO:0003700(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1324 Tan-Chr6:16055370 Tan11g1474 Tan-Chr11:13450125 1.40E-32 dispersed
Tan08g2440 Tan-Chr8:75585057 Tan11g1474 Tan-Chr11:13450125 1.30E-15 dispersed
Tan08g2441 Tan-Chr8:75585057 Tan11g1474 Tan-Chr11:13450125 1.80E-15 dispersed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28748 PF02362 B3 4.70E-18 CL0405 Tan TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1474 K09287 - csv:101222512 399.053