Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1481 ATGAGTGAGACGATTGAGAATTACTTGAGAAAGAACTTCGAACTCGAGCCGAAGGGTCCGTCGGAGGAGGCTCAAATGCGATGGCGATCCGCCGTCTCTATTGTCAAGAATCGCCGCCGGAGGTTCCGCATGGTTGCTGATCTCGGGAAGCGTGCTGAGTGTGAGGAGAAGCGCAAGAAACTCCAGGAAAAGATACGAGTAGCTCTATACGTACAAAAAGCAGCATTGCATTTCATTGATGCTGGGAAGCGAGGTGATTACAAGCTCTCCACAGAAGTAAGGGAAGCTGGTTTCGGAGTCGATCCTGATGCATTAGCATCTATTGTTCAAACCCATAACACCAAGAGTTTGGAATATTTTGGGGGAATTGAGGGATTGGCAAGAGAATTAGACGTTTCTCTGAAAGATGGAATTGTTTCAAGTGAAATACCTTCGAGGCAGAACATATACGGCATCAACCGTTATGTTGAGAAGCCTTCAAGAGGCTTTTGGACGTTTGTATGGGAAGCCTTGCATGATTTGACTCTTATCATTCTCTTGGTTTCTGCTGTGGTTTCCATTGGCGTTGGAAATGCAACTGAAGGTTGGCCTAAAGGCATGTACGACGGACTTGGAATAATACTAAGTATTATTCTGGTCGTGATGGTAACGGCAATCAGTGACTATAATCAGTCCTTGCAATTTAAGGACTTGGAAAAGCAGAAGAAAAACATTATCATTCAAGTTACAAGAGATGGATGCAGACAGAAGGTTTCCATTTATGACTTGGTGGTTGGGGATATTGTTCATTTGTCTATTGGAGATCAAGTCCCTGCTGATGGCATTTTGGTGTCAGGCTACAGCTTATCACTTGACGAATCGAGCTTGTCAGGCGAAAGTGAACCTGTAAATGTAGATGATAATAGGCCTTTTCTTCTAGCAGGGACCAAAGTGCAGGATGGGTCTGGTAAAATGCTGGTTGCTTCGGTTGGGATGAGAACTGAATGGGGAAGGTTGATGGTCACTTTGAGTGAAGGAGGAGATGACGAAACGCCACTTCAGGTAAAGCTTAATGGGGTTGCGACAATTATCGGAAAGATCGGCTTGGTTTTCGCGCTGTTAACGTTCATAGTTCTGATCTCAAGGTTCTTTGTGCATAAAGCATTACACAATCAGATTGGGCACTGGTCCTCCAGAGATGCATCAATTCTTCTGAATTATTTTGCCATTGCTGTTATTATAGTTGTTGTTGCAGTTCCAGAAGGATTGCCTCTGGCCGTGACACTAAGTCTTGCCTTTGCCATGAAAAGGTTAATGAAGGATAAGGCACTTGTGAGGCATCTCTCTGCTTGTGAAACTATGGGGTCTGCAACCTGCATTTGCACTGATAAAACAGGTACATTGACAACAAATCATATGGTTGTTGATAGAATATGGATCTGTGAAGAAACGAGGACAATCAAAAATCCCCACGACGAAGCTGCTTTGAAAACCTCCGTAAATGAAACGGTATACAATCTCTTCGTACAATCCATATTTCAAAATACTAGCTCAGAGGTGGTCAAAGGCAAAGACGGGAGCAACACCATTTTAGGTACTCCAACTGAGACTGCATTGCTAGAATTTGGCTTGCTTTTGGGTGGTGCTTTTGGTTCATTGAATGACGAGTATAAGATCGTCAAAGTTGAGCCATTCAATTCAAATAGAAAGAAAATGTCTGTCCTTGTGGCTCTTCCCGGTGGCGGCTTTCGAGCATTCTGCAAGGGAGCATCAGAAATCATTTTATCTATGTGTAACAAGGTTCTCAGTTCTAACGGAGAAGCATTGCCTCTTTCAGACGAAAAAAGAGCAAACATCTCGAATATCATTAATAGTTTTGCCAGCGATGCTCTTAGAACTCTATGCATCGCTTACAAGGATATAGAAGTTTCTTCAGCAACAGACAAAATTCCAGATGATGATTTTACTTTAATTGCTGTTATTGGTATTAAAGATCCTGTACGTCCAGGTGTAAAGGAGGCAGTTCAGGCTTGTTTGGCTGCTGGAATAACTGTAAGAATGGTAACTGGCGATAACATAAACACGGCTAAAGCCATAGCCAAAGAGTGTGGCATTTTGACAGAAGGTGGTTTGGCAATAGAAGGGCCAGAGTTCCGCAACAAGAGCCAAGATGAAATGGAGAAGTTAATACCAAAACTCCAGGTGATGGCTCGATCATCTCCTCTTGACAAGCATACGTTGGTAGGACAGTTGAGGAAAACGTTCAAAGAAGTGGTGGCTGTCACAGGCGATGGGACTAATGATGCCCCTGCTTTGCATGAGGCAGACATTGGATTGGCCATGGGTATTGCCGGAACAGAGGTTGCAAAAGAAAATGCAGACGTAGTAATAATGGATGATAATTTCACAACCATTGTGAATGTTGCGAGATGGGGACGTGCAGTCTACATCAACATTCAGAAATTCGTACAGTTCCAGCTTACAGTCAACGTAGTGGCTCTCATGCTCAATTTTATATCAGCGTGCGCTTCAGGTTCTGCTCCTCTCACTGCTGTTCAAATGCTATGGGTGAACTTGATAATGGACACACTCGGGGCTCTGGCTTTGGCGACAGAGCCTCCGAACGAGGGGCTGATGAAAAGAAAACCAATTGGGAGAAATGTTAATATCATCACTGGGATTATGTGGAGGAACATCATCGGTCAGAGCATCTACCAAATCACTGTCTTATTAATCCTGAGATTTGAAGGAAAGCGCCTGCTGAAGCTCACTGGTCCCGATTCAAGTATCATTCTCGACACATTCATCTTCAACTCCTTCGTGTTTTGCCAGGTATTCAATGAAATAAACAGCCGTGACATGGAGAAGATAAACGTTTTCAGAGGGATATTGGGGAGTTGGGTTTTCATAGGAGTGATGGCTTCAACCGTAGGTTTCCAAATCATAATAGTAGAATTTCTTGGGACATTTGCAGAAACAATGCCATTGAGTTGGAAATTATGGGCAGGCAGCATCATAATCGGAGCTTTGAGTTTACCAATAGCCATGCTCCTGAAATGCATCCCTGTTTCTAATTCTAACTCCAAAACCACATGCCATTTCCACGATGGTTATGAGCCCCTCCCCACTGGGCCTGAGTTGGCTTGA 3126 43.67 MSETIENYLRKNFELEPKGPSEEAQMRWRSAVSIVKNRRRRFRMVADLGKRAECEEKRKKLQEKIRVALYVQKAALHFIDAGKRGDYKLSTEVREAGFGVDPDALASIVQTHNTKSLEYFGGIEGLARELDVSLKDGIVSSEIPSRQNIYGINRYVEKPSRGFWTFVWEALHDLTLIILLVSAVVSIGVGNATEGWPKGMYDGLGIILSIILVVMVTAISDYNQSLQFKDLEKQKKNIIIQVTRDGCRQKVSIYDLVVGDIVHLSIGDQVPADGILVSGYSLSLDESSLSGESEPVNVDDNRPFLLAGTKVQDGSGKMLVASVGMRTEWGRLMVTLSEGGDDETPLQVKLNGVATIIGKIGLVFALLTFIVLISRFFVHKALHNQIGHWSSRDASILLNYFAIAVIIVVVAVPEGLPLAVTLSLAFAMKRLMKDKALVRHLSACETMGSATCICTDKTGTLTTNHMVVDRIWICEETRTIKNPHDEAALKTSVNETVYNLFVQSIFQNTSSEVVKGKDGSNTILGTPTETALLEFGLLLGGAFGSLNDEYKIVKVEPFNSNRKKMSVLVALPGGGFRAFCKGASEIILSMCNKVLSSNGEALPLSDEKRANISNIINSFASDALRTLCIAYKDIEVSSATDKIPDDDFTLIAVIGIKDPVRPGVKEAVQACLAAGITVRMVTGDNINTAKAIAKECGILTEGGLAIEGPEFRNKSQDEMEKLIPKLQVMARSSPLDKHTLVGQLRKTFKEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVVIMDDNFTTIVNVARWGRAVYINIQKFVQFQLTVNVVALMLNFISACASGSAPLTAVQMLWVNLIMDTLGALALATEPPNEGLMKRKPIGRNVNIITGIMWRNIIGQSIYQITVLLILRFEGKRLLKLTGPDSSIILDTFIFNSFVFCQVFNEINSRDMEKINVFRGILGSWVFIGVMASTVGFQIIIVEFLGTFAETMPLSWKLWAGSIIIGALSLPIAMLLKCIPVSNSNSKTTCHFHDGYEPLPTGPELA 1041
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 13525081 13533091 - Tan0013113.1 Tan11g1481 768418
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1481 1041 NCBIfam HAD-IC family P-type ATPase 551 700 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan11g1481 1041 NCBIfam HAD-IC family P-type ATPase 206 519 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan11g1481 1041 NCBIfam HAD-IC family P-type ATPase 725 840 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan11g1481 1041 FunFam Calcium-transporting ATPase 652 800 - -
Tan11g1481 1041 Gene3D - 169 1013 - -
Tan11g1481 1041 SUPERFAMILY Calcium ATPase, transmembrane domain M 119 1017 IPR023298 -
Tan11g1481 1041 Pfam Cation transporting ATPase, C-terminus 840 1013 IPR006068 -
Tan11g1481 1041 Pfam Cation transport ATPase (P-type) 514 594 - -
Tan11g1481 1041 SUPERFAMILY Calcium ATPase, transduction domain A 239 333 IPR008250 -
Tan11g1481 1041 Pfam haloacid dehalogenase-like hydrolase 647 769 - -
Tan11g1481 1041 NCBIfam calcium-translocating P-type ATPase, PMCA-type 111 1016 IPR006408 GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro)
Tan11g1481 1041 SUPERFAMILY HAD-like 453 860 IPR036412 -
Tan11g1481 1041 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 460 664 IPR023299 GO:0000166(InterPro)
Tan11g1481 1041 Pfam Ca2+-ATPase N terminal autoinhibitory domain 9 53 IPR024750 GO:0005516(InterPro)
Tan11g1481 1041 Pfam E1-E2 ATPase 240 433 - -
Tan11g1481 1041 CDD P-type_ATPase_Ca_PMCA-like 146 888 - -
Tan11g1481 1041 SFLD Haloacid Dehalogenase 436 807 - -
Tan11g1481 1041 PANTHER CATION TRANSPORTING ATPASE 80 1017 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Tan11g1481 1041 SFLD p-type atpase 436 807 IPR044492 -
Tan11g1481 1041 ProSitePatterns E1-E2 ATPases phosphorylation site. 456 462 IPR018303 -
Tan11g1481 1041 PRINTS H+-transporting ATPase (proton pump) signature 612 630 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan11g1481 1041 PRINTS H+-transporting ATPase (proton pump) signature 755 771 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan11g1481 1041 PRINTS H+-transporting ATPase (proton pump) signature 787 812 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan11g1481 1041 FunFam Calcium-transporting ATPase 20 80 - -
Tan11g1481 1041 SMART Cation_ATPase_N_a_2 119 191 IPR004014 -
Tan11g1481 1041 Gene3D - 20 81 - -
Tan11g1481 1041 Gene3D - 137 337 - -
Tan11g1481 1041 Pfam Cation transporter/ATPase, N-terminus 120 186 IPR004014 -
Tan11g1481 1041 FunFam Calcium-transporting ATPase 216 337 - -
Tan11g1481 1041 Gene3D - 451 800 IPR023214 -
Tan11g1481 1041 PRINTS P-type cation-transporting ATPase superfamily signature 285 299 - -
Tan11g1481 1041 PRINTS P-type cation-transporting ATPase superfamily signature 674 684 - -
Tan11g1481 1041 PRINTS P-type cation-transporting ATPase superfamily signature 652 663 - -
Tan11g1481 1041 PRINTS P-type cation-transporting ATPase superfamily signature 454 468 - -
Tan11g1481 1041 PRINTS P-type cation-transporting ATPase superfamily signature 755 774 - -
Tan11g1481 1041 PRINTS P-type cation-transporting ATPase superfamily signature 779 791 - -
Tan11g1481 1041 FunFam Calcium-transporting ATPase 464 659 - -
Tan11g1481 1041 Gene3D - 464 659 IPR023299 GO:0000166(InterPro)
Tan11g1481 1041 FunFam Calcium-transporting ATPase 772 1018 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1718 Tan-Chr2:80232291 Tan11g1481 Tan-Chr11:13525081 1.10E-85 dispersed
Tan10g1637 Tan-Chr10:31065507 Tan11g1481 Tan-Chr11:13525081 0.00E+00 dispersed
Tan11g1481 Tan-Chr11:13525081 Tan01g4694 Tan-Chr1:112877771 0.00E+00 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1481 K01537 - csv:101203529 1843.17