Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1492 ATGTCTGGTTCTGATGGCGTCAACAACACCAACAACAATGGCGCCATAATCGACCTTCCTCAACAGAGACATAACCAACAACAGAGCAATCAGACTTCCAACAATGGCGCTTTGACTGTCAAAAAACCCCCCTCTAAGGACCGTCACAGCAAGGTCGACGGCCGTGGCCGCCGTATTCGTATGCCCATCATTTGTGCCGCTCGCGTCTTCCAACTCACCCGCGAGTTGGGCCACAAATCCGACGGCCAGACCATCGAGTGGCTTCTCCGTCAAGCGGAGCCCTCGATCATCGCCGCCACTGGCACCGGCACCACTCCGGCTAGCTTCTCTACCATCTCCGCCTCTCTTCGCGGTGCTGCCGCTGCTGTTTCCTCTTCTTCTTCCTCTCTTTCCGCTTCTTTCGACCATAAACCCCTTCTGGCTCCGGCTCCCTTCATTCTCGGCAAGCGCGTCAGAACCGACGATGATGGAGGTAATAAAGACGACGGTGGCGGTGGCGGTGGTGGCATTTCGGTCGGCCACTCTGTCGGTTCGATTATGGGTCCGGCTGCGGGTGGCTACTGGGCTATTCCTGCCAGGCCGGATTTCGGGCAAGTGTGGAGCTTTGCCGCCGCCGCGGCAGCGGCGGCTCCGGAGATGGTGATTCAGCCGGCGGCGGTTTCTCATCAGGCGTCACTGTTCGTTCAGCAGCAATCGATCGGAGAGGCGTCGGCGGCGAAAGTGGGAAATTACCTTCCGGGGCATCTGAATTTGCTTGCTTCTTTATCGAGTGGACCGGGAAGTTCCGGCCGGAGAGACAACGACCACCGTTGA 813 58.43 MSGSDGVNNTNNNGAIIDLPQQRHNQQQSNQTSNNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGAAAAVSSSSSSLSASFDHKPLLAPAPFILGKRVRTDDDGGNKDDGGGGGGGISVGHSVGSIMGPAAGGYWAIPARPDFGQVWSFAAAAAAAAPEMVIQPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLSSGPGSSGRRDNDHR 270
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13710718 13712798 + Tan0005888.1 Tan11g1492 768429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1492 270 Pfam TCP family transcription factor 45 136 IPR017887 -
Tan11g1492 270 MobiDBLite consensus disorder prediction 151 170 - -
Tan11g1492 270 MobiDBLite consensus disorder prediction 1 55 - -
Tan11g1492 270 ProSiteProfiles TCP domain profile. 45 99 IPR017887 -
Tan11g1492 270 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 157 IPR005333 GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0042752(PANTHER)|GO:0043565(PANTHER)
Tan11g1492 270 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g2130 Tan-Chr9:71602131 Tan11g1492 Tan-Chr11:13710718 5.00E-29 dispersed
Tan11g1492 Tan-Chr11:13710718 Tan04g0422 Tan-Chr4:3533260 1.20E-74 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28751 PF03634 TCP 2.00E-32 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1492 K16221 - csv:101214586 347.821