Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1546 ATGGCGCTCTCTGATAAACCCTCTCGCCAATCTCTCATCCCCAGCTTCCTTTATTCTTCACCTTCTTCCACTCGCACTCTGCCCCTCAAGAAGATGCTTCAGTCTTCACCCAGTCTCGATGGGGTTTCATCTTCTCCTAAGAGCTTTGTTATTCCCGCCCCGACTGAGCCGTCTAAGAAGATCGAGATGTACTCGCCGGCTTTCTACGCTGCTTGTACTTTTGGTGGAATTCTCAGCTGTGGTCTCACGCATATGACTGTTACTCCTCTCGATTTGGTTAAATGCAATATGCAGATTGACCCTGCGAAATACAAAAGCATTTCGTCTGGTTTTGGAGTTTTGCTTAAGGAGCAGGGTGTGAGGGGTTTCTTTAGGGGTTGGGTGCCTACCCTCCTTGGCTACAGTGCACAGGGTGCCTGCAAGTTTGGTTTCTATGAGTTCTTTAAGAAGTATTATTCGGATATTGCTGGACCTGAGTATGCGGCCAAGTACAAGACCTTGATCTATCTTGCTGGCTCTGCATCTGCTGAGGTGATTGCTGATATTGCACTTTGCCCTTTCGAAGCAGTGAAGGTTCGGGTTCAAACTCAGCCTGGTTTCGCTAGAGGACTATCAGATGGACTTCCCAAGTTCGTCAGATCTGAAGGAACTCTAGGGTTGTACAAGGGTATTGTTCCACTCTGGGGACGCCAGATTCCATACACAATGATGAAGTTTGCATCCTTTGAGACAATAGTCGAAATGATATACAAGTATGCCATTCCCACACCAAAGGACCAGTGCAGCAAATCTCTCCAGCTTGGTGTTAGTTTTGCTGGTGGATATGTGGCTGGTGTTTTCTGTGCTATTGTGTCTCATCCTGCTGATAATCTCGTGTCGTTCCTCAACAATGCCAAAGGAGCAACTGTTGGTGATGCTGTCAAGAAGCTCGGATTATGGGGTCTCTTCACCCGTGGTCTACCTCTCCGTATAGTTATGATTGGAACTCTTACTGGTGCTCAGTGGGGTATTTATGATGCATTCAAAGTATTTGTTGGACTGCCTACTACTGGTGGTGTTGCTCCTGCTGTCCCCACACCTGCTGCTTCTGAGCTTGCAAATGCGTGA 1107 47.52 MALSDKPSRQSLIPSFLYSSPSSTRTLPLKKMLQSSPSLDGVSSSPKSFVIPAPTEPSKKIEMYSPAFYAACTFGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADIALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGTLGLYKGIVPLWGRQIPYTMMKFASFETIVEMIYKYAIPTPKDQCSKSLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGVAPAVPTPAASELANA 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14293363 14298295 + Tan0004643.1 Tan11g1546 768483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1546 368 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 50 354 IPR044677 GO:0005315(PANTHER)|GO:0005315(InterPro)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
Tan11g1546 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 164 248 IPR018108 -
Tan11g1546 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 67 151 IPR018108 -
Tan11g1546 368 FunFam Phosphate carrier protein, mitochondrial 67 345 - -
Tan11g1546 368 Gene3D Mitochondrial carrier domain 68 345 IPR023395 -
Tan11g1546 368 Pfam Mitochondrial carrier protein 69 154 IPR018108 -
Tan11g1546 368 Pfam Mitochondrial carrier protein 165 251 IPR018108 -
Tan11g1546 368 MobiDBLite consensus disorder prediction 1 23 - -
Tan11g1546 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 265 344 IPR018108 -
Tan11g1546 368 SUPERFAMILY Mitochondrial carrier 70 340 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g2425 Tan-Chr9:73838281 Tan11g1546 Tan-Chr11:14293363 2.50E-165 dispersed
Tan10g0176 Tan-Chr10:1805725 Tan11g1546 Tan-Chr11:14293363 3.70E-14 dispersed
Tan11g1546 Tan-Chr11:14293363 Tan07g0051 Tan-Chr7:2617801 5.70E-168 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1546 K15102 - csv:101221771 689.878