Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g1546 | ATGGCGCTCTCTGATAAACCCTCTCGCCAATCTCTCATCCCCAGCTTCCTTTATTCTTCACCTTCTTCCACTCGCACTCTGCCCCTCAAGAAGATGCTTCAGTCTTCACCCAGTCTCGATGGGGTTTCATCTTCTCCTAAGAGCTTTGTTATTCCCGCCCCGACTGAGCCGTCTAAGAAGATCGAGATGTACTCGCCGGCTTTCTACGCTGCTTGTACTTTTGGTGGAATTCTCAGCTGTGGTCTCACGCATATGACTGTTACTCCTCTCGATTTGGTTAAATGCAATATGCAGATTGACCCTGCGAAATACAAAAGCATTTCGTCTGGTTTTGGAGTTTTGCTTAAGGAGCAGGGTGTGAGGGGTTTCTTTAGGGGTTGGGTGCCTACCCTCCTTGGCTACAGTGCACAGGGTGCCTGCAAGTTTGGTTTCTATGAGTTCTTTAAGAAGTATTATTCGGATATTGCTGGACCTGAGTATGCGGCCAAGTACAAGACCTTGATCTATCTTGCTGGCTCTGCATCTGCTGAGGTGATTGCTGATATTGCACTTTGCCCTTTCGAAGCAGTGAAGGTTCGGGTTCAAACTCAGCCTGGTTTCGCTAGAGGACTATCAGATGGACTTCCCAAGTTCGTCAGATCTGAAGGAACTCTAGGGTTGTACAAGGGTATTGTTCCACTCTGGGGACGCCAGATTCCATACACAATGATGAAGTTTGCATCCTTTGAGACAATAGTCGAAATGATATACAAGTATGCCATTCCCACACCAAAGGACCAGTGCAGCAAATCTCTCCAGCTTGGTGTTAGTTTTGCTGGTGGATATGTGGCTGGTGTTTTCTGTGCTATTGTGTCTCATCCTGCTGATAATCTCGTGTCGTTCCTCAACAATGCCAAAGGAGCAACTGTTGGTGATGCTGTCAAGAAGCTCGGATTATGGGGTCTCTTCACCCGTGGTCTACCTCTCCGTATAGTTATGATTGGAACTCTTACTGGTGCTCAGTGGGGTATTTATGATGCATTCAAAGTATTTGTTGGACTGCCTACTACTGGTGGTGTTGCTCCTGCTGTCCCCACACCTGCTGCTTCTGAGCTTGCAAATGCGTGA | 1107 | 47.52 | MALSDKPSRQSLIPSFLYSSPSSTRTLPLKKMLQSSPSLDGVSSSPKSFVIPAPTEPSKKIEMYSPAFYAACTFGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADIALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGTLGLYKGIVPLWGRQIPYTMMKFASFETIVEMIYKYAIPTPKDQCSKSLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGVAPAVPTPAASELANA | 368 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 14293363 | 14298295 | + | Tan0004643.1 | Tan11g1546 | 768483 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g1546 | 368 | PANTHER | SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED | 50 | 354 | IPR044677 | GO:0005315(PANTHER)|GO:0005315(InterPro)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro) | |
Tan11g1546 | 368 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 164 | 248 | IPR018108 | - | |
Tan11g1546 | 368 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 67 | 151 | IPR018108 | - | |
Tan11g1546 | 368 | FunFam | Phosphate carrier protein, mitochondrial | 67 | 345 | - | - | |
Tan11g1546 | 368 | Gene3D | Mitochondrial carrier domain | 68 | 345 | IPR023395 | - | |
Tan11g1546 | 368 | Pfam | Mitochondrial carrier protein | 69 | 154 | IPR018108 | - | |
Tan11g1546 | 368 | Pfam | Mitochondrial carrier protein | 165 | 251 | IPR018108 | - | |
Tan11g1546 | 368 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Tan11g1546 | 368 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 265 | 344 | IPR018108 | - | |
Tan11g1546 | 368 | SUPERFAMILY | Mitochondrial carrier | 70 | 340 | IPR023395 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan09g2425 | Tan-Chr9:73838281 | Tan11g1546 | Tan-Chr11:14293363 | 2.50E-165 | dispersed | |
Tan10g0176 | Tan-Chr10:1805725 | Tan11g1546 | Tan-Chr11:14293363 | 3.70E-14 | dispersed | |
Tan11g1546 | Tan-Chr11:14293363 | Tan07g0051 | Tan-Chr7:2617801 | 5.70E-168 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g1546 | K15102 | - | csv:101221771 | 689.878 |