Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1558 ATGCCAGACGTGCAAGCCCTTGTGAATGATTTCGTTATCAAGCTTAAGAAGCGTAAAATTGAGGGTTCTTTGGCCACCGCGAAGCTTACGGCTGAATTGCTTCGTTCTGTCATTTCGCAGCAGCGAATACCCTACACGAATCAGGCGGCTGCTTTGATTGATGCTGTGAAAGCTATTGGCGAGCAGCTGATTGCTGCGAATCCTGTTGAGCTTGCTGTGGGTAATATTGTGAGGCGTGTTTTGCACATTATTAGAGAGGAGGATCTCTCTCTCACCACAGCTTCAATTGCTGGGTTGAGCTTAGCAGCAGTTAGTGATGATGAAGATGACAGTGAAAAAGATGATCACCCGGCCCTCTCAGCCGCTGCTGTTGCAGCTGCTGCAAGAAGCACTTTGCGGCCGCCTTCCTTGCAAACTCTTCTTGAGGATGTTCCTAATCAAGCATCTGTTCATCAAACTTCATCATCTGGAGGTGATTCAGAAGGAAAGAGCAAATCTGCTGATAAAAGTTCGAGGAGTCGGAAACTCAAGCATGATGTAATTGAAGCTGTTAATGAACTTATTCAGGATATTGCAACTTGTCACGAACAGATTGCTGAGCAAGCAGTGGAACACATCCATCAAAAAACAGTATTGGAATTTCTTTGTGCTGCTAAGGAGAAGAAAAGGTCCTTCCGGGTGTTTGTTGCTGAGGGTGCTCCAAGATATCAGGGTCATCTTCTTGCTAAGGAGTTGGTTACAAGAGGTTTACAGACCACACTTATTACTGATTCTGCAGTTTTTGCCATGATCTCCCGGGTGAATATGGTAATAGTTGGAGCTCATGCTGTCATGGCAAATGGCGGGGTCATGGCACCTGTTGGATTGAATATGGTGGCTCTTTCTGCTAAAAGGCATGCTGTTCCTTTTGTTGTACTAGCTGGAAGTCACAAGTTATGCCCTTTGTATCCTCACAATCCTGAAGTTCTACTCAATGAACTGAGATCCCCATCAGAGCTACTGGACTTCGGTGAATTTTCAGATTGCTTGGACTTTGGAACTAACACTGGTTCTCCTCTTCTCCACGTGGTCAACCCTACATTTGACTATGTGCCACCATCGCTCGTTAGTTTATTTATTACTGACACAGGTGGTCATAACTCATCCTACATGTATCGGCTTATTGCTGATTATTATTCCGCTGATGATTTGGTAATTAAACGAAGGCCTTCTACAGGGAGCTGA 1224 44.93 MPDVQALVNDFVIKLKKRKIEGSLATAKLTAELLRSVISQQRIPYTNQAAALIDAVKAIGEQLIAANPVELAVGNIVRRVLHIIREEDLSLTTASIAGLSLAAVSDDEDDSEKDDHPALSAAAVAAAARSTLRPPSLQTLLEDVPNQASVHQTSSSGGDSEGKSKSADKSSRSRKLKHDVIEAVNELIQDIATCHEQIAEQAVEHIHQKTVLEFLCAAKEKKRSFRVFVAEGAPRYQGHLLAKELVTRGLQTTLITDSAVFAMISRVNMVIVGAHAVMANGGVMAPVGLNMVALSAKRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCLDFGTNTGSPLLHVVNPTFDYVPPSLVSLFITDTGGHNSSYMYRLIADYYSADDLVIKRRPSTGS 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14421168 14429677 - Tan0014072.1 Tan11g1558 768495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1558 407 FunFam translation initiation factor eIF-2B subunit beta 194 392 - -
Tan11g1558 407 Gene3D - 192 391 IPR042529 -
Tan11g1558 407 MobiDBLite consensus disorder prediction 162 176 - -
Tan11g1558 407 MobiDBLite consensus disorder prediction 143 176 - -
Tan11g1558 407 MobiDBLite consensus disorder prediction 143 161 - -
Tan11g1558 407 SUPERFAMILY NagB/RpiA/CoA transferase-like 7 396 IPR037171 -
Tan11g1558 407 Pfam Initiation factor 2 subunit family 19 379 IPR000649 GO:0044237(InterPro)
Tan11g1558 407 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 3 398 IPR051855 GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0006413(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g1558 Tan-Chr11:14421168 Tan11g1560 Tan-Chr11:14435666 3.50E-203 dispersed
Tan11g1558 Tan-Chr11:14421168 Tan11g1559 Tan-Chr11:14435666 3.50E-203 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1558 K03754 - csv:101220366 697.197