Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1559 ATGAGGATTATGCCAGACGTGCAAGCCCTTGTGAATGATTTCGTTATCAAGCTTAAGAAGCGTAAAATTGAGGGTTCTTTGGCCACCGCGAAGCTTACGGCTGAATTGCTTCGTTCTGTCATTTCGCAGCAGCGAATACCCTACACGAATCAGGCGGCTGCTTTGATTGATGCTGTGAAAGCTGTTGGCGAGCAGCTGATTGCTGCGAATCCTGTTGAGCTTGCTGTGGGTAATATTGTGAGGCGTGTTTTGCACATTATTAGAGAGGAGGATCTCTCTCTCACCACAGCTTCAATTGCTGGGTTGAGCTTAGCAGCAGTTAGTGATGATGAAGATGACAGTGAAAAAGATGATCGCCCGGTCCTCTCAGCCGCTGCTGTTGCAGCTGCTGCAAGAAGCACTTTGCGGCCGCCTTCCTTGCAAACTCTTCTTGAGGATGTTCCTAATCAAGCATCTGTTCATCAAACTTCATCATCTGGAGGTGATTCAGAAGGAAAGAGCAAATCTGCTGATAAAAGTTCGAGGAGTCGGAAACTTAAGCATGATGTAATTGAAGCTGTTAATGAACTTATTCAGGATATTGCAATTTGTCACGAACAGATTGCTGAGCAAGCAGTGGAGCACATCCATCAAAACGAGGTAATATTAACTCTTGGGAGTTCCCGAACAGTATTGGAATTTCTTTGTGCTGCTAAGGAGAAGAAAAGGTCCTTCCGGGTGTTTGTTGCTGAGGGTGCTCCAAGATACCAGGGTCATCTTCTTGCTAAGGAGTTGGTTACAAGAGGTTTACAGACCACACTTATTACTGATTCTGCAGTTTTTGCCATGATCTCCCGGGTGAATATGGTAATAGTTGGAGCTCATGCTGTCATGGCAAATGGCGGTGTCATGGCACCTGTTGGATTGAATATGTTGGCTCTTGCAGCTAAAAGGCATGCTGTTCCTTTTGTTGTACTAGCTGGAAGTCACAAGTTATGCCCTTTGTATCCTCACAATCCTGAAGTTCTACTCAATGAACTGAGATCCCCATCAGAGCTACTGGACTTCGGTGAATTTTCAGATTGCTTGGACTTTGGAACTAACACTGGTTCTCCTCTTCTCCACGTGGTCAACCCTACATTTGACTATGTGCCACCATCACTCATTAGTTTATTTATTACTGACACAGGTGGTCATAACTCATCCTACATGTATCGCCTTATTGCTGATTACTATTCAGCTGATGATTTGGTAATTAAACGAAGGCCTTCTACAGGGAGCTGA 1263 44.73 MRIMPDVQALVNDFVIKLKKRKIEGSLATAKLTAELLRSVISQQRIPYTNQAAALIDAVKAVGEQLIAANPVELAVGNIVRRVLHIIREEDLSLTTASIAGLSLAAVSDDEDDSEKDDRPVLSAAAVAAAARSTLRPPSLQTLLEDVPNQASVHQTSSSGGDSEGKSKSADKSSRSRKLKHDVIEAVNELIQDIAICHEQIAEQAVEHIHQNEVILTLGSSRTVLEFLCAAKEKKRSFRVFVAEGAPRYQGHLLAKELVTRGLQTTLITDSAVFAMISRVNMVIVGAHAVMANGGVMAPVGLNMLALAAKRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCLDFGTNTGSPLLHVVNPTFDYVPPSLISLFITDTGGHNSSYMYRLIADYYSADDLVIKRRPSTGS 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14435666 14448517 - Tan0001782.1 Tan11g1559 768496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1559 420 Gene3D - 197 404 IPR042529 -
Tan11g1559 420 SUPERFAMILY NagB/RpiA/CoA transferase-like 6 409 IPR037171 -
Tan11g1559 420 FunFam translation initiation factor eIF-2B subunit beta 197 405 - -
Tan11g1559 420 MobiDBLite consensus disorder prediction 146 178 - -
Tan11g1559 420 Pfam Initiation factor 2 subunit family 168 392 IPR000649 GO:0044237(InterPro)
Tan11g1559 420 MobiDBLite consensus disorder prediction 146 164 - -
Tan11g1559 420 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 6 411 IPR051855 GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0006413(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g1559 Tan-Chr11:14435666 Tan11g1561 Tan-Chr11:14435666 8.70E-213 dispersed
Tan11g1558 Tan-Chr11:14421168 Tan11g1559 Tan-Chr11:14435666 3.50E-203 tandem
Tan11g1559 Tan-Chr11:14435666 Tan11g1560 Tan-Chr11:14435666 8.70E-213 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1559 K03754 - csv:101220366 729.169