Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1579 ATGGGCAAGAAGAAGGGCTGGTTTTATTTAGTCAAGAAGCTATTTGTATCAGAGACAGAGCCAAAGCCTGAGAAGAAGCAAAAGAGATGGAAATGGGTGTTTGGAAGAATGAGGAACAAGAGATTAGCCACACTGACAGCACCATCGCCGCCGAAAGCGACAACGAGACGAGAGGAGGATGAGGAGGAAGAGGAGAGGAAGCAGGCTCTTTCTGTTGCCATTGCGAGTACTGCAGCGGCCCAAGCGGCGGTTGCAGCTGCTAAGGCTGCTGTTGAGGTTGTGTGGCTCACAGGGACCCCTCAATGTAATCAACAAGAGGCTGCAGATGAAGCCTTTAAACCTCTCAAGAAGGCCCCTCCATCTGATCTCCATAAACGTGAAAGGGAAATACATGAGTTTGCTGCTATTATTATCCAAACTGCTTTCCGTGGTTTCCTTGCAAGGAAAGCATTGAGAGCACTAAAAGGAATAGTGAGGCTACAGGCAATTATCAGAGGGAGAGCTGTTAGGCGCCAAGCCATTGCTACTTTGAAGTGCTTGCAGTCCATCGTTAGCATACAATCACAAGTCTGTTCAAATCGACTTCATCTTCCTCGAAACACTTTCAATTCTCCTGAAACGAAGCAGTTGCAGAGCTTGAAAGATAAGATTATAAAGTTGGATTCGAATGGTCAAAGGTGGGATGACAGCCTGCTATCGAAAGAAGAAGCCGATGCAGTGTTTTTGAGCAGGAAAGAGGCAGTGATCAGAAGAGAACGAGTCAAAGAATACTTGTTCGCTCACAGGAGATCTGCAGAATCAGAACGAAAGAACGTAAGAGGAAGATGGAGATACTGGCTAGACCAATGGGTCGACACACAACTCTCCAAAAGCAAAGAACTCGAAGATTTGGACTCCCTTTTCACCTCAAATTCAAAACACAAAGAGACAGAAGACGGATTCAAACCAAACCCAACAACAAAAAACATGGACAGAACCATAATAGAACTCCCCAACCAATCCCCGTCTCAAAAAGAAAAACAATCTCTGAAAAAGCTCTCACACCACAGCAAGCAACGTTCATTGGGGGGCGGAATAGACTTAAACAACAGCTCATTTTCAAGCTCCCCATTGGTGCCAACATACATGGCAGCCACAGAATCTGCAAAGGCAAAAGCAAGGTCGTTGAGCTCGCCAAAGCTGAGGCCAGCAGGGGGATTGGACACATGCTCAGATGGGAATTCCCCATGTAAGACAAAGCAGCTCAGTTTGGTGTCATCAATAGCGAGTGAAGTGACAATCAGCAGTGGAAGAAGGGGTTTTCAGCAGCAGAGATCACCGGGGCTGAAGGGGCTTCCAGGGCCAACTAGATCAAGCAGAAATCTCTCAAAGGATTTGAGCATTGATTCTGAGCATTCCTTGCCAAACTGGGATAGACAAAGTGCCTTCCAATGA 1434 46.51 MGKKKGWFYLVKKLFVSETEPKPEKKQKRWKWVFGRMRNKRLATLTAPSPPKATTRREEDEEEEERKQALSVAIASTAAAQAAVAAAKAAVEVVWLTGTPQCNQQEAADEAFKPLKKAPPSDLHKREREIHEFAAIIIQTAFRGFLARKALRALKGIVRLQAIIRGRAVRRQAIATLKCLQSIVSIQSQVCSNRLHLPRNTFNSPETKQLQSLKDKIIKLDSNGQRWDDSLLSKEEADAVFLSRKEAVIRRERVKEYLFAHRRSAESERKNVRGRWRYWLDQWVDTQLSKSKELEDLDSLFTSNSKHKETEDGFKPNPTTKNMDRTIIELPNQSPSQKEKQSLKKLSHHSKQRSLGGGIDLNNSSFSSSPLVPTYMAATESAKAKARSLSSPKLRPAGGLDTCSDGNSPCKTKQLSLVSSIASEVTISSGRRGFQQQRSPGLKGLPGPTRSSRNLSKDLSIDSEHSLPNWDRQSAFQ 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14727614 14731495 - Tan0016545.1 Tan11g1579 768516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1579 477 ProSiteProfiles IQ motif profile. 155 182 - -
Tan11g1579 477 MobiDBLite consensus disorder prediction 53 68 - -
Tan11g1579 477 PANTHER IQ-DOMAIN 5-RELATED 11 413 - -
Tan11g1579 477 MobiDBLite consensus disorder prediction 385 409 - -
Tan11g1579 477 Pfam IQ calmodulin-binding motif 134 152 IPR000048 GO:0005515(InterPro)
Tan11g1579 477 Pfam Protein of unknown function (DUF4005) 363 437 IPR025064 -
Tan11g1579 477 ProSiteProfiles IQ motif profile. 131 159 - -
Tan11g1579 477 MobiDBLite consensus disorder prediction 330 363 - -
Tan11g1579 477 MobiDBLite consensus disorder prediction 428 477 - -
Tan11g1579 477 Gene3D - 131 183 - -
Tan11g1579 477 SMART iq_5 130 152 IPR000048 GO:0005515(InterPro)
Tan11g1579 477 MobiDBLite consensus disorder prediction 449 477 - -
Tan11g1579 477 MobiDBLite consensus disorder prediction 41 68 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan10g1631 Tan-Chr10:30711236 Tan11g1579 Tan-Chr11:14727614 2.70E-26 dispersed
Tan11g0812 Tan-Chr11:6799965 Tan11g1579 Tan-Chr11:14727614 7.60E-27 dispersed
Tan11g1579 Tan-Chr11:14727614 Tan11g1580 Tan-Chr11:14727614 2.20E-233 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1579 - - - 0.0