Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g1593 | ATGGGCCTTGCTCTTGAAACCACTCAGTTTCATGTTCTTGCTGTTGATGATAGCTTCATCGATCGGAAATTGATCGAGCGCCTCCTCGAAACCTCTTCCTATCATGTTACTGCTGTTGATTCCGGTACCAAGGCCTTGGAATTTCTTGGTCTTATTGAAGATCATGATCTCGATGATGATGATGATGAACGACACTCCAAAATCTCCCCCTCAAATCAAGAAGTGGATGTAAATTTGATCATCACCGATTACAGTATGCCCGGAATGAGCGGCTACGATCTCCTCAGGAAGATCAAGGAATCGAAATCTCTTAAAGACATACCAGTAGTGATTATGTCCTCTGAGAATGTTCCTTCAAGAATCAACAGATGCTTGGAAGAAGGAGCGGAAGAGTTCTTCCTCAAACCAGTTCAATTGTCTGATGTCAGAAAGTTGAGACCTCATTTGATTAAAGAAAAACCCACAAGGAATTGA | 474 | 42.19 | MGLALETTQFHVLAVDDSFIDRKLIERLLETSSYHVTAVDSGTKALEFLGLIEDHDLDDDDDERHSKISPSNQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKPTRN | 157 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 14982887 | 14984304 | - | Tan0007775.1 | Tan11g1593 | 768530 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g1593 | 157 | ProSiteProfiles | Response regulatory domain profile. | 11 | 150 | IPR001789 | GO:0000160(InterPro) | |
Tan11g1593 | 157 | Gene3D | - | 11 | 156 | - | - | |
Tan11g1593 | 157 | SMART | REC_2 | 10 | 146 | IPR001789 | GO:0000160(InterPro) | |
Tan11g1593 | 157 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 9 | 151 | IPR045279 | GO:0009736(InterPro) | |
Tan11g1593 | 157 | SUPERFAMILY | CheY-like | 9 | 145 | IPR011006 | - | |
Tan11g1593 | 157 | Pfam | Response regulator receiver domain | 12 | 143 | IPR001789 | GO:0000160(InterPro) | |
Tan11g1593 | 157 | CDD | REC_typeA_ARR | 12 | 145 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan08g1252 | Tan-Chr8:38118784 | Tan11g1593 | Tan-Chr11:14982887 | 1.00E-47 | dispersed | |
Tan09g2194 | Tan-Chr9:71968697 | Tan11g1593 | Tan-Chr11:14982887 | 5.20E-34 | dispersed | |
Tan11g1266 | Tan-Chr11:10792753 | Tan11g1593 | Tan-Chr11:14982887 | 9.90E-41 | dispersed | |
Tan11g1593 | Tan-Chr11:14982887 | Tan11g1594 | Tan-Chr11:14982887 | 4.70E-71 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28758 | PF00072 | Response_reg | 2.10E-20 | CL0304 | Tan | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g1593 | K14492 | - | csv:101210839 | 242.276 |