Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1593 ATGGGCCTTGCTCTTGAAACCACTCAGTTTCATGTTCTTGCTGTTGATGATAGCTTCATCGATCGGAAATTGATCGAGCGCCTCCTCGAAACCTCTTCCTATCATGTTACTGCTGTTGATTCCGGTACCAAGGCCTTGGAATTTCTTGGTCTTATTGAAGATCATGATCTCGATGATGATGATGATGAACGACACTCCAAAATCTCCCCCTCAAATCAAGAAGTGGATGTAAATTTGATCATCACCGATTACAGTATGCCCGGAATGAGCGGCTACGATCTCCTCAGGAAGATCAAGGAATCGAAATCTCTTAAAGACATACCAGTAGTGATTATGTCCTCTGAGAATGTTCCTTCAAGAATCAACAGATGCTTGGAAGAAGGAGCGGAAGAGTTCTTCCTCAAACCAGTTCAATTGTCTGATGTCAGAAAGTTGAGACCTCATTTGATTAAAGAAAAACCCACAAGGAATTGA 474 42.19 MGLALETTQFHVLAVDDSFIDRKLIERLLETSSYHVTAVDSGTKALEFLGLIEDHDLDDDDDERHSKISPSNQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKPTRN 157
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14982887 14984304 - Tan0007775.1 Tan11g1593 768530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1593 157 ProSiteProfiles Response regulatory domain profile. 11 150 IPR001789 GO:0000160(InterPro)
Tan11g1593 157 Gene3D - 11 156 - -
Tan11g1593 157 SMART REC_2 10 146 IPR001789 GO:0000160(InterPro)
Tan11g1593 157 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 151 IPR045279 GO:0009736(InterPro)
Tan11g1593 157 SUPERFAMILY CheY-like 9 145 IPR011006 -
Tan11g1593 157 Pfam Response regulator receiver domain 12 143 IPR001789 GO:0000160(InterPro)
Tan11g1593 157 CDD REC_typeA_ARR 12 145 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g1252 Tan-Chr8:38118784 Tan11g1593 Tan-Chr11:14982887 1.00E-47 dispersed
Tan09g2194 Tan-Chr9:71968697 Tan11g1593 Tan-Chr11:14982887 5.20E-34 dispersed
Tan11g1266 Tan-Chr11:10792753 Tan11g1593 Tan-Chr11:14982887 9.90E-41 dispersed
Tan11g1593 Tan-Chr11:14982887 Tan11g1594 Tan-Chr11:14982887 4.70E-71 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28758 PF00072 Response_reg 2.10E-20 CL0304 Tan TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1593 K14492 - csv:101210839 242.276