Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1594 ATGGGCCTTGCTCTTGAAACCACTCAGTTTCATGTTCTTGCTGTTGATGATAGCTTCATCGATCGGAAATTGATCGAGCGCCTCCTCGAAACCTCTTCCTATCATGTTACTGCTGTTGATTCCGGTACCAAGGCCTTGGAATTTCTTGGTCTTATTGAAGATCATGATCTCGATGATGATGATGATGAACGACACTCCAAAATCTCCCCCTCAAATCAAGTACGAAGAAGAAGCCCTAATTTTCTCTCTCGCGCTCTTTTTTCTTTTCTTTTCTTTTTTTCCCCCCTCTGTTTCTCTGGATTTTTGTTTCTTCTTCCTCTAATTTGTTTGATCATTTCTAATTTCCAGGAAGTGGATGTAAATTTGATCATCACCGATTACAGTATGCCCGGAATGAGCGGCTACGATCTCCTCAGGAAGATCAAGGAATCGAAATCTCTTAAAGACATACCAGTAGTGATTATGTCCTCTGAGAATGTTCCTTCAAGAATCAACAGATGCTTGGAAGAAGGAGCGGAAGAGTTCTTCCTCAAACCAGTTCAATTGTCTGATGTCAGAAAGTTGAGACCTCATTTGATTAAAGAAAAACCCACAAGGAATTGA 603 40.8 MGLALETTQFHVLAVDDSFIDRKLIERLLETSSYHVTAVDSGTKALEFLGLIEDHDLDDDDDERHSKISPSNQVRRRSPNFLSRALFSFLFFFSPLCFSGFLFLLPLICLIISNFQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKPTRN 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14982887 14984304 - Tan0007775.2 Tan11g1594 768531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1594 200 Gene3D - 11 199 - -
Tan11g1594 200 ProSiteProfiles Response regulatory domain profile. 11 193 IPR001789 GO:0000160(InterPro)
Tan11g1594 200 SUPERFAMILY CheY-like 9 49 IPR011006 -
Tan11g1594 200 SMART REC_2 10 189 IPR001789 GO:0000160(InterPro)
Tan11g1594 200 Pfam Response regulator receiver domain 113 186 IPR001789 GO:0000160(InterPro)
Tan11g1594 200 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 194 IPR045279 GO:0009736(InterPro)
Tan11g1594 200 CDD REC_typeA_ARR 12 188 - -
Tan11g1594 200 SUPERFAMILY CheY-like 115 188 IPR011006 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g1593 Tan-Chr11:14982887 Tan11g1594 Tan-Chr11:14982887 4.70E-71 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28759 PF00072 Response_reg 6.60E-16 CL0304 Tan TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1594 K14492 - csv:101210839 228.024