Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g1594 | ATGGGCCTTGCTCTTGAAACCACTCAGTTTCATGTTCTTGCTGTTGATGATAGCTTCATCGATCGGAAATTGATCGAGCGCCTCCTCGAAACCTCTTCCTATCATGTTACTGCTGTTGATTCCGGTACCAAGGCCTTGGAATTTCTTGGTCTTATTGAAGATCATGATCTCGATGATGATGATGATGAACGACACTCCAAAATCTCCCCCTCAAATCAAGTACGAAGAAGAAGCCCTAATTTTCTCTCTCGCGCTCTTTTTTCTTTTCTTTTCTTTTTTTCCCCCCTCTGTTTCTCTGGATTTTTGTTTCTTCTTCCTCTAATTTGTTTGATCATTTCTAATTTCCAGGAAGTGGATGTAAATTTGATCATCACCGATTACAGTATGCCCGGAATGAGCGGCTACGATCTCCTCAGGAAGATCAAGGAATCGAAATCTCTTAAAGACATACCAGTAGTGATTATGTCCTCTGAGAATGTTCCTTCAAGAATCAACAGATGCTTGGAAGAAGGAGCGGAAGAGTTCTTCCTCAAACCAGTTCAATTGTCTGATGTCAGAAAGTTGAGACCTCATTTGATTAAAGAAAAACCCACAAGGAATTGA | 603 | 40.8 | MGLALETTQFHVLAVDDSFIDRKLIERLLETSSYHVTAVDSGTKALEFLGLIEDHDLDDDDDERHSKISPSNQVRRRSPNFLSRALFSFLFFFSPLCFSGFLFLLPLICLIISNFQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKPTRN | 200 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 14982887 | 14984304 | - | Tan0007775.2 | Tan11g1594 | 768531 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g1594 | 200 | Gene3D | - | 11 | 199 | - | - | |
Tan11g1594 | 200 | ProSiteProfiles | Response regulatory domain profile. | 11 | 193 | IPR001789 | GO:0000160(InterPro) | |
Tan11g1594 | 200 | SUPERFAMILY | CheY-like | 9 | 49 | IPR011006 | - | |
Tan11g1594 | 200 | SMART | REC_2 | 10 | 189 | IPR001789 | GO:0000160(InterPro) | |
Tan11g1594 | 200 | Pfam | Response regulator receiver domain | 113 | 186 | IPR001789 | GO:0000160(InterPro) | |
Tan11g1594 | 200 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 9 | 194 | IPR045279 | GO:0009736(InterPro) | |
Tan11g1594 | 200 | CDD | REC_typeA_ARR | 12 | 188 | - | - | |
Tan11g1594 | 200 | SUPERFAMILY | CheY-like | 115 | 188 | IPR011006 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan11g1593 | Tan-Chr11:14982887 | Tan11g1594 | Tan-Chr11:14982887 | 4.70E-71 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28759 | PF00072 | Response_reg | 6.60E-16 | CL0304 | Tan | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g1594 | K14492 | - | csv:101210839 | 228.024 |