Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1616 ATGAACCTTCCAGCTGCTAGTTTAATGGAAACTAGGAGAGAGAATGGGTTACTGTCTTGTTTGGCTTTGCTTTGGTTATGGGTTTCTGCAACTGCGGCTTCAACAGCCAAAGATTTAAACGCTGAAGTTCAAGCTTTGATGGGGATCAAAGCTGCTTTGAAGGATCCCCATTCTGTTCTGGCTTGGGATGAAGATGCTGTGGATCCATGCACTTGGAATTTGATCACTTGCTCTCCTGATAAATTTGTCATTGGCATAGGAGCTCCAAGCCAAAACTTTTCTGGTACACTCTCACCAAGTGTTGGAAATTTGACAAACCTCCAATTTTTGCTTCTTCAGAATAACTATATAACAGGAAAAATTCCCAACGAGATTAGCAAGATATCTAAACTTCACACACTTGACCTTTCAAACAACTTGTTCTCTGGTGAAATTTCGAGCTCTTTCTCCAATTTGAAAAGCCTCCAATACCTGAGGCTCAACAATAACACCTTCTCTGGGCCAATCCCATCATCACTGGCTAACATGACCCAGCTTGCCTTGCTGGATCTATCCTACAATAATTTGAGCGGCCCTGTGCCCAGATTGCTGGCTAAGACATTTAACTTTACTGGAAACTCTTTGATTTGTGCCCCTGGAACTAAGGAAGTATGCTATGGAACAACTCCATTGCCACTTTCTTTCGCTGTTACTAATTCCACATACTCCCAACCTCCTAGAAGACATAAAGGCCAGAGAATTGCCTTAGTCATTGGCCTTAGCTTGGGCTGCATCTGTCTGTTAACTCTTGCATATGGTTTCTTTATCTGGCGGAAGCATAGGCACAACCAGCAAATATTCTTTGAAGCTAATGATCGGCACCAGGAAGAACTTAGCCTTGGGAACGTAAAGAGGTTTCAGTTCAGAGAACTTCGGAATGCCACTCACAATTTCAGCAGTAAAAACTTGATTGGAAAAGGTGGATTTGGAAATGTATACAGAGGATATCTACAAGATGGCACCATTGTAGCTGTCAAGAGACTCAAAGATGGGAACGCTATGAGAGGAGAGATCCAGTTTCAGACTGAAGTGGAGATGATAAGCTTGGCAGTGCATAGGAACCTCCTCAGGTTGTATGGTTTCTGTATGACAGAAACCGAGAGACTTTTGGTCTATCCATATATGTCCAATGGCAGTGTTGCTACCCGTCTTAAAGCAAAACCAGCTCTGGATTGGGGTACAAGGAAGAGAATTGCCTTGGGAGCTGCTAGGGGCTTGTTATACTTACATGAACAGTGTGATCCAAAAATAATTCACAGGGATGTGAAGGCTGCAAATATACTGCTTGATGATTTCTGTGAGGCAGTGGTCGGTGATTTTGGGCTGGCAAAGCTGTTAGACCACAGAGATTCACATGTCACTACTGCAGTAAGGGGAACTGTTGGACACATTGCACCAGAATATCTGTCAACTGGCCAATCCTCAGAGAAAACAGATGTTTTTGGGTTTGGAATTCTATTACTTGAGCTTGTATCAGGTCAAAGAGCTCTTGAATTTGGAAAAGCAGCAAACCAAAAGGGTGCAATACTGGACTGGGTAAAGAAGCTACACCAAGAAAAGAAGCTAGAAATGCTTGTTGACAAAGACTTAAGAAGCAATTACGACCCAATTGAACTTGAAGAAATTGTTCGAGTTGCTCTCTTGTGCATCCAATATCTTCCAAGCCACAGGCCTAAGATGTCTGAAGTGGTCAGGATGCTTGAAGGAGATGGGCTTGCCGAGAAATGGGAAGCTTCCCAAAGAGCAGAAGCAAGCAGGGGCAGAGCCAATGAGTTCTCCTCTTCAGAACGTTACTCTGATCTTACTGATGACTCTTCATTGTTTGCTCAAGCGATGGAGCTCTCGGGACCAAGATAA 1896 43.41 MNLPAASLMETRRENGLLSCLALLWLWVSATAASTAKDLNAEVQALMGIKAALKDPHSVLAWDEDAVDPCTWNLITCSPDKFVIGIGAPSQNFSGTLSPSVGNLTNLQFLLLQNNYITGKIPNEISKISKLHTLDLSNNLFSGEISSSFSNLKSLQYLRLNNNTFSGPIPSSLANMTQLALLDLSYNNLSGPVPRLLAKTFNFTGNSLICAPGTKEVCYGTTPLPLSFAVTNSTYSQPPRRHKGQRIALVIGLSLGCICLLTLAYGFFIWRKHRHNQQIFFEANDRHQEELSLGNVKRFQFRELRNATHNFSSKNLIGKGGFGNVYRGYLQDGTIVAVKRLKDGNAMRGEIQFQTEVEMISLAVHRNLLRLYGFCMTETERLLVYPYMSNGSVATRLKAKPALDWGTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDFCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELVSGQRALEFGKAANQKGAILDWVKKLHQEKKLEMLVDKDLRSNYDPIELEEIVRVALLCIQYLPSHRPKMSEVVRMLEGDGLAEKWEASQRAEASRGRANEFSSSERYSDLTDDSSLFAQAMELSGPR 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 15754951 15759126 + Tan0004870.1 Tan11g1616 768553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1616 631 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 20 631 - -
Tan11g1616 631 FunFam Somatic embryogenesis receptor-like kinase 1 388 600 - -
Tan11g1616 631 Pfam Leucine rich repeat N-terminal domain 39 78 IPR013210 -
Tan11g1616 631 Gene3D Transferase(Phosphotransferase) domain 1 388 600 - -
Tan11g1616 631 Gene3D Ribonuclease Inhibitor 39 220 IPR032675 -
Tan11g1616 631 ProSitePatterns Protein kinases ATP-binding region signature. 317 339 IPR017441 GO:0005524(InterPro)
Tan11g1616 631 MobiDBLite consensus disorder prediction 591 612 - -
Tan11g1616 631 FunFam Somatic embryogenesis receptor kinase 1 280 387 - -
Tan11g1616 631 Pfam Leucine Rich Repeat 130 152 IPR001611 GO:0005515(InterPro)
Tan11g1616 631 Pfam Leucine Rich Repeat 154 176 IPR001611 GO:0005515(InterPro)
Tan11g1616 631 Pfam Leucine Rich Repeat 179 198 IPR001611 GO:0005515(InterPro)
Tan11g1616 631 Pfam Leucine Rich Repeat 106 127 IPR001611 GO:0005515(InterPro)
Tan11g1616 631 ProSiteProfiles Protein kinase domain profile. 311 590 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g1616 631 Pfam Protein tyrosine and serine/threonine kinase 314 580 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g1616 631 SMART serkin_6 311 580 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g1616 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g1616 631 SUPERFAMILY L domain-like 42 210 - -
Tan11g1616 631 Gene3D Phosphorylase Kinase; domain 1 280 387 - -
Tan11g1616 631 FunFam Putative LRR receptor-like serine/threonine-protein kinase 39 220 - -
Tan11g1616 631 SUPERFAMILY Protein kinase-like (PK-like) 290 581 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0932 Tan-Chr4:8204132 Tan11g1616 Tan-Chr11:15754951 1.50E-237 dispersed
Tan10g1711 Tan-Chr10:43391278 Tan11g1616 Tan-Chr11:15754951 2.30E-137 dispersed
Tan11g0395 Tan-Chr11:3166273 Tan11g1616 Tan-Chr11:15754951 1.90E-224 dispersed
Tan11g1616 Tan-Chr11:15754951 Tan11g1618 Tan-Chr11:15754951 1.10E-280 dispersed
Tan11g1616 Tan-Chr11:15754951 Tan11g1617 Tan-Chr11:15754951 8.30E-260 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68219 PF00069 Pkinase 2.90E-44 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1616 - - - 0.0