Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1617 ATGAACCTTCCAGCTGCTAGTTTAATGGAAACTAGGAGAGAGAATGGGTTACTGTCTTGTTTGGCTTTGCTTTGGTTATGGGTTTCTGCAACTGCGGCTTCAACAGCCAAAGATTTAAACGCTGAAGTTCAAGCTTTGATGGGGATCAAAGCTGCTTTGAAGGATCCCCATTCTGTTCTGGCTTGGGATGAAGATGCTGTGGATCCATGCACTTGGAATTTGATCACTTGCTCTCCTGATAAATTTGTCATTGGCATAGGAGCTCCAAGCCAAAACTTTTCTGGTACACTCTCACCAAGTGTTGGAAATTTGACAAACCTCCAATTTTTGCTTCTTCAGAATAACTATATAACAGGAAAAATTCCCAACGAGATTAGCAAGATATCTAAACTTCACACACTTGACCTTTCAAACAACTTGTTCTCTGGTGAAATTTCGAGCTCTTTCTCCAATTTGAAAAGCCTCCAATACCTGAGGCTCAACAATAACACCTTCTCTGGGCCAATCCCATCATCACTGGCTAACATGACCCAGCTTGCCTTGCTGGATCTATCCTACAATAATTTGAGCGGCCCTGTGCCCAGATTGCTGGCTAAGACATTTAACTTTACTGGAAACTCTTTGATTTGTGCCCCTGGAACTAAGGAAGTATGCTATGGAACAACTCCATTGCCACTTTCTTTCGCTGTTACTAATTCCACATACTCCCAACCTCCTAGAAGACATAAAGGCCAGAGAATTGCCTTAGTCATTGGCCTTAGCTTGGGCTGCATCTGTCTGTTAACTCTTGCATATGGTTTCTTTATCTGGCGGAAGCATAGGCACAACCAGCAAATATTCTTTGAAGCTAATGATCGGCACCAGGAAGAACTTAGCCTTGGGAACGTAAAGAGGTTTCAGTTCAGAGAACTTCGGAATGCCACTCACAATTTCAGCAGTAAAAACTTGATTGGAAAAGGTGGATTTGGAAATGTATACAGAGGATATCTACAAGATGGCACCATTGTAGCTGTCAAGAGACTCAAAGATGGGAACGCTATGAGAGGAGAGATCCAGTTTCAGACTGAAGTGGAGATGATAAGCTTGGCAGTGCATAGGAACCTCCTCAGGTTGTATGGTTTCTGTATGACAGAAACCGAGAGACTTTTGGTCTATCCATATATGTCCAATGGCAGTGTTGCTACCCGTCTTAAAGCAAAACCAGCTCTGGATTGGGGTACAAGGAAGAGAATTGCCTTGGGAGCTGCTAGGGGCTTGTTATACTTACATGAACAGTGTGATCCAAAAATAATTCACAGGGATGTGAAGGCTGCAAATATACTGCTTGATGATTTCTGTGAGGCAGTGGTCGGTGATTTTGGGCTGGCAAAGCTGTTAGACCACAGAGATTCACATGTCACTACTGCAGTAAGGGGAACTGTTGGACACATTGCACCAGAATATCTGTCAACTGGCCAATCCTCAGAGAAAACAGATGTTTTTGGGTTTGGAATTCTATTACTTGAGCTTGTATCAGGTCAAAGAGCTCTTGAATTTGGAAAAGCAGCAAACCAAAAGGGTGCAATACTGGACTGGGTAAACTGA 1584 43.06 MNLPAASLMETRRENGLLSCLALLWLWVSATAASTAKDLNAEVQALMGIKAALKDPHSVLAWDEDAVDPCTWNLITCSPDKFVIGIGAPSQNFSGTLSPSVGNLTNLQFLLLQNNYITGKIPNEISKISKLHTLDLSNNLFSGEISSSFSNLKSLQYLRLNNNTFSGPIPSSLANMTQLALLDLSYNNLSGPVPRLLAKTFNFTGNSLICAPGTKEVCYGTTPLPLSFAVTNSTYSQPPRRHKGQRIALVIGLSLGCICLLTLAYGFFIWRKHRHNQQIFFEANDRHQEELSLGNVKRFQFRELRNATHNFSSKNLIGKGGFGNVYRGYLQDGTIVAVKRLKDGNAMRGEIQFQTEVEMISLAVHRNLLRLYGFCMTETERLLVYPYMSNGSVATRLKAKPALDWGTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDFCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELVSGQRALEFGKAANQKGAILDWVN 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 15754951 15759126 + Tan0004870.2 Tan11g1617 768554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1617 527 SUPERFAMILY L domain-like 42 210 - -
Tan11g1617 527 ProSitePatterns Protein kinases ATP-binding region signature. 317 339 IPR017441 GO:0005524(InterPro)
Tan11g1617 527 ProSiteProfiles Protein kinase domain profile. 311 527 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g1617 527 Gene3D Phosphorylase Kinase; domain 1 280 387 - -
Tan11g1617 527 Gene3D Ribonuclease Inhibitor 39 220 IPR032675 -
Tan11g1617 527 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 20 526 - -
Tan11g1617 527 FunFam Somatic embryogenesis receptor-like kinase 1 388 527 - -
Tan11g1617 527 SUPERFAMILY Protein kinase-like (PK-like) 290 513 IPR011009 -
Tan11g1617 527 Gene3D Transferase(Phosphotransferase) domain 1 388 527 - -
Tan11g1617 527 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g1617 527 Pfam Protein kinase domain 312 511 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g1617 527 Pfam Leucine Rich Repeat 130 152 IPR001611 GO:0005515(InterPro)
Tan11g1617 527 Pfam Leucine Rich Repeat 106 127 IPR001611 GO:0005515(InterPro)
Tan11g1617 527 Pfam Leucine Rich Repeat 179 198 IPR001611 GO:0005515(InterPro)
Tan11g1617 527 Pfam Leucine Rich Repeat 154 176 IPR001611 GO:0005515(InterPro)
Tan11g1617 527 Pfam Leucine rich repeat N-terminal domain 39 78 IPR013210 -
Tan11g1617 527 FunFam Putative LRR receptor-like serine/threonine-protein kinase 39 220 - -
Tan11g1617 527 FunFam Somatic embryogenesis receptor kinase 1 280 387 - -
Tan11g1617 527 SMART serkin_6 311 526 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g1617 Tan-Chr11:15754951 Tan09g1285 Tan-Chr9:65032981 7.10E-63 dispersed
Tan11g1616 Tan-Chr11:15754951 Tan11g1617 Tan-Chr11:15754951 8.30E-260 tandem
Tan11g1617 Tan-Chr11:15754951 Tan11g1618 Tan-Chr11:15754951 6.40E-221 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68220 PF00069 Pkinase 1.80E-42 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1617 - - - 0.0