Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1618 ATGAACCTTCCAGCTGCTAGTTTAATGGAAACTAGGAGAGAGAATGGGTTACTGTCTTGTTTGGCTTTGCTTTGGTTATGGGTTTCTGCAACTGCGGCTTCAACAGCCAAAGATTTAAACGCTGAAGTTCAAGCTTTGATGGGGATCAAAGCTGCTTTGAAGGATCCCCATTCTGTTCTGGCTTGGGATGAAGATGCTGTGGATCCATGCACTTGGAATTTGATCACTTGCTCTCCTGATAAATTTGTCATTGGCATAGGAGCTCCAAGCCAAAACTTTTCTGGTACACTCTCACCAAGTGTTGGAAATTTGACAAACCTCCAATTTTTGCTTCTTCAGAATAACTATATAACAGGAAAAATTCCCAACGAGATTAGCAAGATATCTAAACTTCACACACTTGACCTTTCAAACAACTTGTTCTCTGGTGAAATTTCGAGCTCTTTCTCCAATTTGAAAAGCCTCCAATACCTGAGGCTCAACAATAACACCTTCTCTGGGCCAATCCCATCATCACTGGCTAACATGACCCAGCTTGCCTTGCTGGATCTATCCTACAATAATTTGAGCGGCCCTGTGCCCAGATTGCTGGCTAAGACATTTAACTTTACTGGAAACTCTTTGATTTGTGCCCCTGGAACTAAGGAAGTATGCTATGGAACAACTCCATTGCCACTTTCTTTCGCTGTTACTAATTCCACATATCGGCACCAGGAAGAACTTAGCCTTGGGAACGTAAAGAGGTTTCAGTTCAGAGAACTTCGGAATGCCACTCACAATTTCAGCAGTAAAAACTTGATTGGAAAAGGTGGATTTGGAAATGTATACAGAGGATATCTACAAGATGGCACCATTGTAGCTGTCAAGAGACTCAAAGATGGGAACGCTATGAGAGGAGAGATCCAGTTTCAGACTGAAGTGGAGATGATAAGCTTGGCAGTGCATAGGAACCTCCTCAGGTTGTATGGTTTCTGTATGACAGAAACCGAGAGACTTTTGGTCTATCCATATATGTCCAATGGCAGTGTTGCTACCCGTCTTAAAGCAAAACCAGCTCTGGATTGGGGTACAAGGAAGAGAATTGCCTTGGGAGCTGCTAGGGGCTTGTTATACTTACATGAACAGTGTGATCCAAAAATAATTCACAGGGATGTGAAGGCTGCAAATATACTGCTTGATGATTTCTGTGAGGCAGTGGTCGGTGATTTTGGGCTGGCAAAGCTGTTAGACCACAGAGATTCACATGTCACTACTGCAGTAAGGGGAACTGTTGGACACATTGCACCAGAATATCTGTCAACTGGCCAATCCTCAGAGAAAACAGATGTTTTTGGGTTTGGAATTCTATTACTTGAGCTTGTATCAGGTCAAAGAGCTCTTGAATTTGGAAAAGCAGCAAACCAAAAGGGTGCAATACTGGACTGGGTAAAGAAGCTACACCAAGAAAAGAAGCTAGAAATGCTTGTTGACAAAGACTTAAGAAGCAATTACGACCCAATTGAACTTGAAGAAATTGTTCGAGTTGCTCTCTTGTGCATCCAATATCTTCCAAGCCACAGGCCTAAGATGTCTGAAGTGGTCAGGATGCTTGAAGGAGATGGGCTTGCCGAGAAATGGGAAGCTTCCCAAAGAGCAGAAGCAAGCAGGGGCAGAGCCAATGAGTTCTCCTCTTCAGAACGTTACTCTGATCTTACTGATGACTCTTCATTGTTTGCTCAAGCGATGGAGCTCTCGGGACCAAGATAA 1746 43.36 MNLPAASLMETRRENGLLSCLALLWLWVSATAASTAKDLNAEVQALMGIKAALKDPHSVLAWDEDAVDPCTWNLITCSPDKFVIGIGAPSQNFSGTLSPSVGNLTNLQFLLLQNNYITGKIPNEISKISKLHTLDLSNNLFSGEISSSFSNLKSLQYLRLNNNTFSGPIPSSLANMTQLALLDLSYNNLSGPVPRLLAKTFNFTGNSLICAPGTKEVCYGTTPLPLSFAVTNSTYRHQEELSLGNVKRFQFRELRNATHNFSSKNLIGKGGFGNVYRGYLQDGTIVAVKRLKDGNAMRGEIQFQTEVEMISLAVHRNLLRLYGFCMTETERLLVYPYMSNGSVATRLKAKPALDWGTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDFCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELVSGQRALEFGKAANQKGAILDWVKKLHQEKKLEMLVDKDLRSNYDPIELEEIVRVALLCIQYLPSHRPKMSEVVRMLEGDGLAEKWEASQRAEASRGRANEFSSSERYSDLTDDSSLFAQAMELSGPR 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 15754951 15759126 + Tan0004870.3 Tan11g1618 768555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1618 581 FunFam Somatic embryogenesis receptor-like kinase 1 338 550 - -
Tan11g1618 581 Gene3D Ribonuclease Inhibitor 39 220 IPR032675 -
Tan11g1618 581 FunFam Somatic embryogenesis receptor kinase 1 230 337 - -
Tan11g1618 581 Gene3D Transferase(Phosphotransferase) domain 1 338 550 - -
Tan11g1618 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 380 392 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g1618 581 Pfam Leucine rich repeat N-terminal domain 39 78 IPR013210 -
Tan11g1618 581 Pfam Protein tyrosine and serine/threonine kinase 264 530 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g1618 581 ProSiteProfiles Protein kinase domain profile. 261 540 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g1618 581 SUPERFAMILY L domain-like 42 210 - -
Tan11g1618 581 ProSitePatterns Protein kinases ATP-binding region signature. 267 289 IPR017441 GO:0005524(InterPro)
Tan11g1618 581 Gene3D Phosphorylase Kinase; domain 1 229 337 - -
Tan11g1618 581 SUPERFAMILY Protein kinase-like (PK-like) 242 531 IPR011009 -
Tan11g1618 581 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 20 581 - -
Tan11g1618 581 FunFam Putative LRR receptor-like serine/threonine-protein kinase 39 220 - -
Tan11g1618 581 MobiDBLite consensus disorder prediction 541 562 - -
Tan11g1618 581 SMART serkin_6 261 530 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g1618 581 Pfam Leucine Rich Repeat 179 198 IPR001611 GO:0005515(InterPro)
Tan11g1618 581 Pfam Leucine Rich Repeat 106 127 IPR001611 GO:0005515(InterPro)
Tan11g1618 581 Pfam Leucine Rich Repeat 154 176 IPR001611 GO:0005515(InterPro)
Tan11g1618 581 Pfam Leucine Rich Repeat 130 152 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g1616 Tan-Chr11:15754951 Tan11g1618 Tan-Chr11:15754951 1.10E-280 dispersed
Tan11g1618 Tan-Chr11:15754951 Tan09g1285 Tan-Chr9:65032981 1.40E-72 dispersed
Tan11g1617 Tan-Chr11:15754951 Tan11g1618 Tan-Chr11:15754951 6.40E-221 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68221 PF00069 Pkinase 2.40E-44 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1618 - - - 0.0