Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1661 ATGAATGGAGATGTAGCTTCCACGGCACCGGCCGCTGCTCCGGCGGGCTCCGCCGAGCCCCAATACGTGAGGGCAAAGACTTCTGTATGGTGGGACATCGAGAATTGTCAAGTCCCTAAGGGCTGCGATCCTCACGCTATCGCTCAAAACATCAGCTCCGCTCTCGTCAAAATCAACTATTGCGGTCCCGTTTCCATTTCCGCCTATGGAGACACTAATCGCATTCCCAATTCTATTCAGCAAGCTCTCTCCAGTACTGGGATCGCCTTGAATCACGTCCCTGCCGGTGTTAAAGATGCAAGTGACAAGAAGATTCTAGTTGATATGCTGTTTTGGGCGGTTGATAACCCTGCTCCTGCAAATTATTTGCTAATTTCCGGTGATAGGGATTTTTCTAATGCACTCCATCAATTAAGAATGAGAAGATATAATATTCTTCTTGCACAGCCACAAAAGGCTTCGGCACCACTAGTTGCAGCAGCAAAGAGTGTTTGGCTCTGGATGAGCCTTGTAGCTGGAGGACCCCCAATATCCAGTGCTGAATCATCTCAACTTGTGAATGGTATCCTTACTTCTGACCCTCCAATATCACATAACTCTGGATTTGATCATAATCAGACGGCACAAGCTATAGTTTACAAACCTGAAAATGTCTCTTTGGGAAACCAAAGACCTTATTCTACTGAGAAGATGGGCGACAACAAACATAAGGGTAAATATATACAGAAAAGCTCTAACCAACCAGTCCTATCCAGAGCTTTAAGCTCACCTGTTTCTATGCCAGAGAAAAACCTTAATATTTTAAACCAACCAAATCATATGCAAGCAAAGCAGTTTAAGAAAGCACCCCATGAATTCTTTGGTAATGGCAATTCTGTAGCCTCTTCTAGTCAGTCTACTCCAAATCTGTTTATTGAAAATTCCAGTCATGCTAGGACTGATGGCAATGTTTCAATGGGTAGTTCCTCAAGTTACCAGCCTCCACACATGAGGCAAAACAACATGCAGTTCCATCCTTCTTTCCGACCAGATAATTTTTTTCCTCCTAACTCCCATAATCATAATTCTTTCCCAGTCCCTGGTCAACCTGATCTCTCTGCACCTAATATTAGTAAGCTACATATCTCTGATTATCCCAATTATGCTATAAATCCTCAAAATTTTCATCATCAAGCTGGTGAATTTAGACCACACATCAAGTCTCAAAATCCTGCTAACTTTAGTTTGCCAGACAAAGGCCGTAATCAGCATGGTGGCCAGTCATTCCATCATGATGCGGTGAATAAAAGACAGGCTCGTGATGTAGTAGAACATACACCTCATTCATCTTCCACCACTGTTACTAGAAGTTTTTCTTATAATGATGTCTGGGGATCTCAGGGGCAACCAGCACCTTCAGAGTACATTCAAGGCCTTATTGGAGTTATTCTTCTTGCATTAAACACCCTGAAAACGGAAAAAATTATGCCAACTGAGGCAAATATAGCTGACTGCATCCGATATGGAGATTTGAGAAACTGCAATACTGATGTAAGAATGGCACTAGATAGTGCGATAGAGCATAATATGGTAGTGAAGCAGAATTTAGGCGCAGTGCAATTGTATGTTGGTAAAACAGAAAAATTGTGGAAGTGTGTGAACCCTCTAGGTGGGTATCCTAATCAATACCAAAAGGCTATATGGGATAAGATTCAAAAATTTTTGGCTTCTCCAGCTGGTCGTTCTGCAATAATGGCTTCTCGTTGCAGATATGAAGCAGCATTGATTCTGAATAAAGAATGCTTAATAGATTTTGCTTTGGGCCATGTGCTTCAGATTTTGAATATGATAACCTCAATGAAGAAATGGATTATTCATCATATTTCAGGATGGCAGCCAATTAGTATTATGCTATCAGAAGGTAATACAGATGCAACTTCAAGAACTGAACTTGATTGA 1938 41.64 MNGDVASTAPAAAPAGSAEPQYVRAKTSVWWDIENCQVPKGCDPHAIAQNISSALVKINYCGPVSISAYGDTNRIPNSIQQALSSTGIALNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWMSLVAGGPPISSAESSQLVNGILTSDPPISHNSGFDHNQTAQAIVYKPENVSLGNQRPYSTEKMGDNKHKGKYIQKSSNQPVLSRALSSPVSMPEKNLNILNQPNHMQAKQFKKAPHEFFGNGNSVASSSQSTPNLFIENSSHARTDGNVSMGSSSSYQPPHMRQNNMQFHPSFRPDNFFPPNSHNHNSFPVPGQPDLSAPNISKLHISDYPNYAINPQNFHHQAGEFRPHIKSQNPANFSLPDKGRNQHGGQSFHHDAVNKRQARDVVEHTPHSSSTTVTRSFSYNDVWGSQGQPAPSEYIQGLIGVILLALNTLKTEKIMPTEANIADCIRYGDLRNCNTDVRMALDSAIEHNMVVKQNLGAVQLYVGKTEKLWKCVNPLGGYPNQYQKAIWDKIQKFLASPAGRSAIMASRCRYEAALILNKECLIDFALGHVLQILNMITSMKKWIIHHISGWQPISIMLSEGNTDATSRTELD 645
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 16033718 16039778 - Tan0008862.1 Tan11g1661 768598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1661 645 CDD PIN_limkain_b1_N_like 26 150 - -
Tan11g1661 645 MobiDBLite consensus disorder prediction 401 415 - -
Tan11g1661 645 Gene3D - 21 169 - -
Tan11g1661 645 Pfam OST-HTH Associated domain 580 634 IPR025677 -
Tan11g1661 645 PANTHER LIMKAIN B LKAP 16 522 IPR024768 GO:0005777(InterPro)|GO:0010468(InterPro)
Tan11g1661 645 Pfam NYN domain 26 162 IPR021139 GO:0004540(InterPro)
Tan11g1661 645 MobiDBLite consensus disorder prediction 398 423 - -
Tan11g1661 645 MobiDBLite consensus disorder prediction 223 248 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g1661 Tan-Chr11:16033718 Tan11g1662 Tan-Chr11:16033718 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1661 - - - 0.0