Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g1695 ATGGTGCTGCCCAAAACTTTCTCAGAATCTGATGTTTCTATACATTCCACTTTTGCCTCTCGCTATGTCCGTGACTCTGCTCCAAGATTCACCATGCCTGAAAACTCCATGCCCAAGGAGGCCGCCTTTCAGATCATCAACGACGAGCTCATGCTCGATGGCAACCCAAGGCTTAATTTAGCTTCCTTCGTCACCACTTGGATGGAGCCCGAGTGCGATAAGCTCATTATGGACTCTGTCAACAAGAACTACGTCGACATGGACGAGTACCCTGTCACCACCGAGCTTCAAAACCGATGCGTGAACATGATTGCCCATCTCTTCAACGCTCCGTTGGGAGACTCCGACACGGCGGTCGGAGTCGGGACGGTGGGGTCGTCGGAGGCCATCATGCTGGCAGGGCTTGCCTTCAAGAGGAAGTGGCAGAACAAGCGGAAAGCGGAGGGAAAGCCATACGAGAAGCCGAATATAGTGACGGGTGCGAATGTTCAAGTTTGTTGGGAGAAATTTGCGAGATACTTTGAAGTGGAGCTGAAGGAAGTGAAGGTGAGAGAAGGGTATTACGTGATGGACCCTGTTCAAGCCGTGGAGATGGTGGATGAGAACACCATTTGCGTTGCTGCCATTTTGGGCTCTACTTACAATGGAGAATTTGAAGATGTGAAGCTGTTGAATGATTTATTGGTGGAGAAGAATAAGGAAACAGGATGGGATACTCCCATTCACGTCGATGCAGCAAGCGGTGGATTCATAGCACCGTTTCTGTATCCAGAGCTTGAATGGGACTTCAGACTTCCATTGGTGAAGAGCATCAACGTCAGTGGCCACAAATATGGACTTGTGTATGCTGGAATCGGTTGGGTCATTTGGAGAACCAAAGAAGATTTGCCTGAAGAACTCATTTTCCACATCAATTACCTTGGAGCGGATCAGCCCACCTTCACTCTCAACTTCTCCAAAGGGTCTAGCCAGATCATTGCTCAATATTACCAACTAATCCGCTTGGGTTATGAGGGATACAGGAATGTGATGCAAAATTGTCACGACAACGCAATGGTGTTGAAGGAAGGACTTGAAAACACAGGGAGGTTCACCATAGCATCAAAGGACATGGGAGTGCCAGTGGTTGCATTCTCTCTCAAAGACAGAAGCCGCCACGATGAGTTTGAGGTGTCAGAGATGTTGCGCCGCTTTGGTTGGATCGTGCCTGCATATCCAATGCCAGAGGGCGCAAAGCATGTCTCAGTTCTTCGTGTGGTCATTAGAGAGGACTTTTCTCGAACACTTGCAGAGCGTCTTGTGCTTGATATCATAAAGGTTTTGGCCGAGCTTGACACTCTCCCACCTAAGAATGGTGTAAAAATAACAAGCTTAGAAAAGGGTGACAATGGAAAAAATGAGACAGCGGAGAAGAAGACTACAGAGGAGACAGAGAGGGAAATAGCGACTTATTGGAGGAATATAACTAAGGCTAGAAAAATTAAGCTTGCTGCGAATCAGGCTGGTCCTTCAGTTACTATCATTGCCAAATAA 1533 47.68 MVLPKTFSESDVSIHSTFASRYVRDSAPRFTMPENSMPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMDSVNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGDSDTAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYEKPNIVTGANVQVCWEKFARYFEVELKEVKVREGYYVMDPVQAVEMVDENTICVAAILGSTYNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKEDLPEELIFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGYEGYRNVMQNCHDNAMVLKEGLENTGRFTIASKDMGVPVVAFSLKDRSRHDEFEVSEMLRRFGWIVPAYPMPEGAKHVSVLRVVIREDFSRTLAERLVLDIIKVLAELDTLPPKNGVKITSLEKGDNGKNETAEKKTTEETEREIATYWRNITKARKIKLAANQAGPSVTIIAK 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 16443727 16445652 - Tan0012884.1 Tan11g1695 768632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g1695 510 CDD DOPA_deC_like 59 439 - -
Tan11g1695 510 MobiDBLite consensus disorder prediction 460 476 - -
Tan11g1695 510 FunFam Glutamate decarboxylase 1 65 - -
Tan11g1695 510 Gene3D - 1 65 - -
Tan11g1695 510 MobiDBLite consensus disorder prediction 455 476 - -
Tan11g1695 510 NCBIfam glutamate decarboxylase 16 444 IPR010107 GO:0004351(InterPro)|GO:0006536(InterPro)|GO:0030170(InterPro)
Tan11g1695 510 PANTHER GLUTAMATE DECARBOXYLASE 1 493 IPR010107 GO:0004351(InterPro)|GO:0004351(PANTHER)|GO:0005829(PANTHER)|GO:0006536(InterPro)|GO:0006538(PANTHER)|GO:0030170(InterPro)
Tan11g1695 510 SUPERFAMILY PLP-dependent transferases 16 444 IPR015424 -
Tan11g1695 510 Gene3D - 361 448 - -
Tan11g1695 510 FunFam Glutamate decarboxylase 361 448 - -
Tan11g1695 510 FunFam Glutamate decarboxylase 66 360 - -
Tan11g1695 510 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830(InterPro)|GO:0019752(InterPro)|GO:0030170(InterPro)
Tan11g1695 510 Gene3D - 66 360 IPR015421 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g1695 Tan-Chr11:16443727 Tan11g1696 Tan-Chr11:16492666 1.60E-293 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g1695 K01580 - csv:101208026 966.066